Protein ID | Ani_SJS100_1|g1246.t1 |
Gene name | |
Location | scaffold_004:494431..494886 |
Strand | - |
Gene length (bp) | 455 |
Transcript length (bp) | 363 |
Coding sequence length (bp) | 363 |
Protein length (aa) | 121 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.5E-05 | 25 | 99 |
PF07993 | NAD_binding_4 | Male sterility protein | 2.7E-04 | 17 | 93 |
Orthofinder run ID | 3 |
Orthogroup | 1550 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1246.t1 MYGDCIEIHSVNKGTLMESLWNETSSVTNNPYHYSKVIAEREAWKIHAAQDRWDLVVLNPGLVLGPSMTPESVSG SLFMIENMFRGNNRMGVPELEWGDIQLVGIGEYGPFCAPRSEGLA* |
Coding | >Ani_SJS100_1|g1246.t1 ATGTACGGCGATTGCATCGAGATCCATTCCGTCAATAAAGGCACTCTGATGGAATCTCTATGGAACGAAACCAGC AGCGTCACCAACAACCCATACCACTATTCCAAGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACGCCGCCCAG GATCGCTGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTCGGACCATCAATGACGCCCGAGTCCGTCTCAGGC AGCCTCTTCATGATCGAAAACATGTTCCGTGGGAATAACCGCATGGGTGTTCCGGAACTGGAGTGGGGAGACATT CAGCTTGTTGGAATTGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGAGGGTCTTGCCTAA |
Transcript | >Ani_SJS100_1|g1246.t1 ATGTACGGCGATTGCATCGAGATCCATTCCGTCAATAAAGGCACTCTGATGGAATCTCTATGGAACGAAACCAGC AGCGTCACCAACAACCCATACCACTATTCCAAGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACGCCGCCCAG GATCGCTGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTCGGACCATCAATGACGCCCGAGTCCGTCTCAGGC AGCCTCTTCATGATCGAAAACATGTTCCGTGGGAATAACCGCATGGGTGTTCCGGAACTGGAGTGGGGAGACATT CAGCTTGTTGGAATTGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGAGGGTCTTGCCTAA |
Gene | >Ani_SJS100_1|g1246.t1 ATGTACGGCGATTGCATCGAGATCCATTCCGTCAATAAAGGCACTCTGATGGAATCTCTATGGAACGAAACCAGC AGCGTCACCAACAACCCATACCACTATTCCAAGGTAATAGCAGAGCGCGAAGCCTGGAAGATTCACGCCGCCCAG GATCGCTGGGACCTCGTTGTCCTGAACCCAGGGTTAGTTCTCGGACCATCAATGACGCCCGAGTCCGTCTCAGGC AGCCTCTTCATGATCGAAAACATGTTCCGTGGGAATAACCGCATGGGTGTTCCGGAACTGTATTATCCTGTGGTT GATGTGCGGGATGTGGCGGAGGCGCATGTCAGGGCTGGGAATATGCCTAACTCTAATGGGCGATATATTATCGCA GGGAGTGGGGAGACATTCAGCTTGTTGGAATTGGCGAATATGGCCCGTTCTGTGCACCGAGATCCGAGGGTCTTG CCTAA |