© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1230.t1 |
| Gene name | |
| Location | scaffold_004:433335..435582 |
| Strand | - |
| Gene length (bp) | 2247 |
| Transcript length (bp) | 1692 |
| Coding sequence length (bp) | 1692 |
| Protein length (aa) | 564 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.1E-44 | 62 | 501 |
| PF00324 | AA_permease | Amino acid permease | 1.2E-17 | 75 | 454 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 71 | 19 |
| 2 | 84 | 106 | 22 |
| 3 | 183 | 202 | 19 |
| 4 | 209 | 231 | 22 |
| 5 | 257 | 275 | 18 |
| 6 | 296 | 318 | 22 |
| 7 | 346 | 368 | 22 |
| 8 | 399 | 421 | 22 |
| 9 | 426 | 445 | 19 |
| 10 | 466 | 488 | 22 |
| 11 | 492 | 514 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1230.t1 MAPSPHQQHSQLVVDPDTVPVGGEEVRSQAESREDAKLLKSMGYKPVLHRTYTLLENFSTTFAALYFVGGVRVTY STGIAAGGNLAYWTSYLVTLVFTYITAAVIAEVCSASPSAGSIYLWAAESGGPRFGRLLGFVVAWWSTTAWTTFC ASNTQSAVNYMLSELTVFDVDFPKDTSSVKFRAVQWICTEILLALAALLNYLPPRFFRWVFYFSSFIVMLDFFLN VIWLPIGAANTWGFRTAEEAFMSTYNATGAPAGWNWCLSYLATAGILIGFDASGHVAEETKHASVTAARGIFWST VVSGIGGLATIILFLFCAPDNDTLMSFGSPQPFVPLYAVVLGKGGHVFMNVICIVALWLNTAIAIVAASRLVFAV ARDGVLPFSSWVSKVHNGQPRNAVIVVWGVSALISCTLLPSDVAFTSLVSAAGVPSAAAYGLICLGRLLCTPKRF PKPEWSLGRLSKPFQFIGVFWNGWVVAVLFSPYEFPVTGANLNYAPIIMAGVTIFALISYFVTPESAWLPIDRIS HFIDSKGADVHESVEEVGSGDNHRQPEATTSSSGREEN* |
| Coding | >Ani_SJS100_1|g1230.t1 ATGGCTCCATCACCTCACCAACAACACTCGCAGCTCGTCGTCGATCCTGACACTGTTCCGGTTGGGGGAGAAGAG GTCAGGAGCCAGGCAGAGTCCCGAGAAGATGCAAAGCTATTGAAATCGATGGGCTATAAGCCAGTCCTTCACAGG ACATACACACTGCTTGAAAACTTCTCCACGACATTCGCTGCTCTTTACTTCGTTGGAGGTGTGCGCGTCACTTAT AGTACCGGTATCGCAGCAGGTGGTAATCTGGCTTACTGGACGAGTTATCTGGTCACGTTGGTTTTCACATACATC ACCGCTGCCGTTATCGCGGAAGTATGCTCTGCCTCGCCCTCCGCGGGCTCTATCTACTTGTGGGCCGCGGAGTCT GGAGGCCCTCGCTTTGGAAGGCTACTCGGATTTGTTGTTGCTTGGTGGAGTACTACTGCCTGGACGACCTTCTGT GCTAGCAACACCCAATCTGCTGTCAATTACATGCTCTCCGAATTGACGGTCTTCGACGTCGACTTCCCAAAAGAC ACATCCAGTGTCAAGTTCCGTGCTGTCCAATGGATTTGCACAGAGATTTTGCTAGCATTGGCCGCACTCCTCAAC TACCTGCCGCCTAGGTTCTTCAGATGGGTGTTCTACTTCTCGTCCTTCATCGTCATGTTGGACTTCTTTCTCAAT GTCATCTGGCTGCCGATTGGCGCTGCCAATACATGGGGTTTCCGTACGGCTGAGGAGGCTTTCATGTCCACCTAC AACGCCACAGGTGCCCCTGCAGGCTGGAACTGGTGTCTTTCCTACCTCGCCACTGCGGGTATCCTGATCGGTTTT GACGCCTCCGGTCATGTTGCAGAAGAGACCAAGCATGCTTCGGTGACGGCAGCACGTGGTATCTTCTGGAGTACC GTCGTCAGTGGCATTGGTGGACTAGCAACTATCATTTTGTTCCTCTTCTGTGCACCCGACAACGACACTCTCATG TCCTTCGGCTCCCCCCAGCCTTTCGTGCCCCTCTATGCCGTCGTTCTCGGCAAAGGAGGTCATGTTTTCATGAAC GTCATCTGCATAGTTGCATTGTGGCTCAACACAGCGATCGCCATCGTCGCCGCCTCCCGCCTAGTCTTCGCCGTC GCTCGCGACGGTGTCCTCCCATTCTCCAGCTGGGTCTCCAAAGTCCACAACGGCCAGCCCCGCAATGCCGTCATC GTAGTCTGGGGTGTCTCAGCACTCATCAGCTGCACGCTCCTACCCTCCGATGTTGCTTTCACATCTCTAGTCTCA GCCGCCGGTGTTCCTAGCGCCGCCGCATACGGTCTCATCTGTCTAGGCCGACTCCTCTGCACCCCGAAACGCTTC CCAAAGCCAGAGTGGAGTCTAGGACGCCTAAGCAAGCCGTTCCAATTCATCGGTGTCTTCTGGAACGGCTGGGTG GTAGCTGTGCTATTCTCACCTTACGAATTCCCCGTGACGGGTGCTAATCTAAACTACGCCCCGATCATCATGGCC GGTGTGACCATCTTCGCCCTAATCTCTTACTTCGTCACCCCCGAAAGCGCCTGGTTGCCTATTGACCGCATCTCG CATTTCATCGACAGTAAGGGTGCTGATGTGCACGAATCCGTTGAGGAAGTTGGTAGTGGTGATAATCATCGTCAG CCTGAGGCGACAACGTCTTCCTCAGGGAGGGAGGAGAACTGA |
| Transcript | >Ani_SJS100_1|g1230.t1 ATGGCTCCATCACCTCACCAACAACACTCGCAGCTCGTCGTCGATCCTGACACTGTTCCGGTTGGGGGAGAAGAG GTCAGGAGCCAGGCAGAGTCCCGAGAAGATGCAAAGCTATTGAAATCGATGGGCTATAAGCCAGTCCTTCACAGG ACATACACACTGCTTGAAAACTTCTCCACGACATTCGCTGCTCTTTACTTCGTTGGAGGTGTGCGCGTCACTTAT AGTACCGGTATCGCAGCAGGTGGTAATCTGGCTTACTGGACGAGTTATCTGGTCACGTTGGTTTTCACATACATC ACCGCTGCCGTTATCGCGGAAGTATGCTCTGCCTCGCCCTCCGCGGGCTCTATCTACTTGTGGGCCGCGGAGTCT GGAGGCCCTCGCTTTGGAAGGCTACTCGGATTTGTTGTTGCTTGGTGGAGTACTACTGCCTGGACGACCTTCTGT GCTAGCAACACCCAATCTGCTGTCAATTACATGCTCTCCGAATTGACGGTCTTCGACGTCGACTTCCCAAAAGAC ACATCCAGTGTCAAGTTCCGTGCTGTCCAATGGATTTGCACAGAGATTTTGCTAGCATTGGCCGCACTCCTCAAC TACCTGCCGCCTAGGTTCTTCAGATGGGTGTTCTACTTCTCGTCCTTCATCGTCATGTTGGACTTCTTTCTCAAT GTCATCTGGCTGCCGATTGGCGCTGCCAATACATGGGGTTTCCGTACGGCTGAGGAGGCTTTCATGTCCACCTAC AACGCCACAGGTGCCCCTGCAGGCTGGAACTGGTGTCTTTCCTACCTCGCCACTGCGGGTATCCTGATCGGTTTT GACGCCTCCGGTCATGTTGCAGAAGAGACCAAGCATGCTTCGGTGACGGCAGCACGTGGTATCTTCTGGAGTACC GTCGTCAGTGGCATTGGTGGACTAGCAACTATCATTTTGTTCCTCTTCTGTGCACCCGACAACGACACTCTCATG TCCTTCGGCTCCCCCCAGCCTTTCGTGCCCCTCTATGCCGTCGTTCTCGGCAAAGGAGGTCATGTTTTCATGAAC GTCATCTGCATAGTTGCATTGTGGCTCAACACAGCGATCGCCATCGTCGCCGCCTCCCGCCTAGTCTTCGCCGTC GCTCGCGACGGTGTCCTCCCATTCTCCAGCTGGGTCTCCAAAGTCCACAACGGCCAGCCCCGCAATGCCGTCATC GTAGTCTGGGGTGTCTCAGCACTCATCAGCTGCACGCTCCTACCCTCCGATGTTGCTTTCACATCTCTAGTCTCA GCCGCCGGTGTTCCTAGCGCCGCCGCATACGGTCTCATCTGTCTAGGCCGACTCCTCTGCACCCCGAAACGCTTC CCAAAGCCAGAGTGGAGTCTAGGACGCCTAAGCAAGCCGTTCCAATTCATCGGTGTCTTCTGGAACGGCTGGGTG GTAGCTGTGCTATTCTCACCTTACGAATTCCCCGTGACGGGTGCTAATCTAAACTACGCCCCGATCATCATGGCC GGTGTGACCATCTTCGCCCTAATCTCTTACTTCGTCACCCCCGAAAGCGCCTGGTTGCCTATTGACCGCATCTCG CATTTCATCGACAGTAAGGGTGCTGATGTGCACGAATCCGTTGAGGAAGTTGGTAGTGGTGATAATCATCGTCAG CCTGAGGCGACAACGTCTTCCTCAGGGAGGGAGGAGAACTGA |
| Gene | >Ani_SJS100_1|g1230.t1 ATGGCTCCATCACCTCACCAACAACACTCGCAGCTCGTCGTCGATCCTGACACTGTTCCGGTTGGGGGAGAAGAG GTCAGGAGCCAGGCAGAGTCCCGAGAAGATGCAAAGCTATTGGTATGTTTATCAGTGGCAATCCTTTCAGCGATC AAGTGTCGGTATCGAATAAGTAATCGCTGATATACTACCAACAGAAATCGATGGGCTATAAGCCAGTGAGTCAGC CTCAGCAAACCTATTGCATGCAGGTTTGTCTAACCATACTTATAGGTCCTTCACAGGACATACACACTGCTTGAA AACTTCTCCACGACATTCGGTAAATGAAATGATTACGGTGGATTCTAGCTCCATGAACGTAGCTAACCTCACATG ATTAGCTGCTCTTTACTTCGTTGGAGGTGTGCGCGTCACTTATAGTACCGGTATCGCAGCAGGTGGTAATCTGGC TTACTGGTAGGTCTTATCATCAACTATACGATGATAGATTCTCATTTTGTGTAGGACGAGTTATCTGGTCACGTT GGTTTTCACATACATCACCGCTGCCGTTATCGCGGAAGTATGCTCTGCCTCGCCCTCCGCGGGCTCTATCTACTT GTGGGCCGCGGAGTCTGGAGGCCCTCGCTTTGGAAGGCTACTCGGATTTGTTGTTGCTTGGTGGAGTACTACTGC CTGGACGACCTTCTGTGCTAGCAACACCCAATCTGCTGTCAATTACATGCTCTCCGTGAGTGTCCCTTCAAAGAA TAATCAAGATGGATTACTTATCTGGACTATAGGAATTGACGGTCTTCGACGTCGACTTCCCAAAAGACACATCCA GTGTCAAGTTCCGTGCTGTCCAATGGATTTGCACAGAGATTTTGCTAGCATTGGCCGCACTCCTCAACTACCTGC CGCGTATGTTCAGCCCCGAAACTGATTGCGCCTATCCTGTCTCTGTTCAGCTTTGCTTATAGTCCTCCAGCTAGG TTCTTCAGATGGGTGTTCTACTTCTCGTCCTTCATCGTCATGTTGGACTTCTTTCTCAATGTCATCTGGCTGCCG ATTGGCGCTGCCAATACATGGGGTTTCCGTACGGCTGAGGAGGCTTTCATGTCCACCTACAACGCCACAGGTGCC CCTGCAGGCTGGAACTGGTGTCTTTCCTACCTCGCCACTGCGGGTATCCTGATCGGTTTTGACGCCTCCGGTCAT GTTGCAGAAGAGACCAAGCATGCTTCGGTGACGGCAGCACGTGGTATCTTCTGGAGTACCGTCGTCAGTGGCATT GGTGGACTAGCAACTATCATTTTGTTCCTCTTCTGTGCAGTGAGTTCCGCACCTCCACATAACGATTACCCAACA ATCAAATACTTACGTGACCAGCCCGACAACGACACTCTCATGTCCTTCGGCTCCCCCCAGCCTTTCGTGCCCCTC TATGCCGTCGTTCTCGGCAAAGGAGGTCATGTTTTCATGAACGTCATCTGCATAGTTGCATTGTGGCTCGTAAGT TCACCTTCCAACAGCTCCTTCACCCATGTATACACAATACTAAACCACCTTACAGAACACAGCGATCGCCATCGT CGCCGCCTCCCGCCTAGTCTTCGCCGTCGCTCGCGACGGTGTCCTCCCATTCTCCAGCTGGGTCTCCAAAGTCCA CAACGGCCAGCCCCGCAATGCCGTCATCGTAGTCTGGGGTGTCTCAGCACTCATCAGCTGCACGCTCCTACCCTC CGATGTTGCTTTCACATCTCTAGTCTCAGCCGCCGGTGTTCCTAGCGCCGCCGCATACGGTCTCATCTGTCTAGG CCGACTCCTCTGCACCCCGAAACGCTTCCCAAAGCCAGAGTGGAGTCTAGGACGCCTAAGCAAGCCGTTCCAATT CATCGGTGTCTTCTGGAACGGCTGGGTGGTAGCTGTGCTATTCTCACCTTACGAATTCCCCGTGACGGGTGCTAA TCTAAACTGTAAGACCATTCCCCCTCCCCCACTTCCAACACGATATGTTCTAAAACTTCTGCTTACTTACTCTCC TCCTAACCAGACGCCCCGATCATCATGGCCGGTGTGACCATCTTCGCCCTAATCTCTTACTTCGTCACCCCCGAA AGCGCCTGGTTGCCTATTGACCGCATCTCGCATTTCATCGACAGTAAGGGTGCTGATGTGCACGAATCCGTTGAG GAAGTTGGTAGTGGTGATAATCATCGTCAGCCTGAGGCGACAACGTCTTCCTCAGGGAGGGAGGAGAACTGA |