© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1221.t1 |
| Gene name | |
| Location | scaffold_004:382241..384111 |
| Strand | + |
| Gene length (bp) | 1870 |
| Transcript length (bp) | 1551 |
| Coding sequence length (bp) | 1551 |
| Protein length (aa) | 517 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 8.3E-65 | 61 | 489 |
| PF00324 | AA_permease | Amino acid permease | 1.0E-23 | 66 | 479 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 42 | 59 | 17 |
| 2 | 74 | 96 | 22 |
| 3 | 123 | 145 | 22 |
| 4 | 165 | 187 | 22 |
| 5 | 194 | 216 | 22 |
| 6 | 240 | 257 | 17 |
| 7 | 278 | 300 | 22 |
| 8 | 328 | 350 | 22 |
| 9 | 383 | 405 | 22 |
| 10 | 415 | 432 | 17 |
| 11 | 445 | 467 | 22 |
| 12 | 482 | 500 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1221.t1 MEYHDNQTGPSSAAKGPHAMSIEDPPPPSSYQYRGKPRLERYLGFLPMLAFAATLQASWESLGSSLQAGLLNGGP VAIVYGMLLSFAGSLCLTLSMAEMASINPVAGAQYHWTYELAPFAPRFLSFIQGWITVIAWWANVAVGPYLVGTE IQGLLVQNYPSYNPEGWHGTLLVFAVLFLPLLVNIFARRLLAPVEVLSGVIHILSYPAIMVVMIVLGQRHTNDFV WTEFVTDQSGWHDKGVIYSIGLLTAAFTLSSFDGVIHMSEEVNDAPRAVPRSMVWGLCVNAILAFGFAIALLYTM GDFQKALDSPTGYPIIEIFYAQTGSKAASSAMMLPILLSGCYSSFNVLASVSRLTWAFARDEGFPFSSFFAHVSP RYKIPLRSLFLVTTITVLIALINIGSSAAFNAVLSLDTLALYISYLVPVLFMLIKRVRFPSEIRYGPFNLGRFGI PINTFAMAYGTYITIFLPWPETQPVTASGMNYGAPVFGIALLFAVIDWFVRGHKKWNGPTVMASPK* |
| Coding | >Ani_SJS100_1|g1221.t1 ATGGAATACCATGATAACCAAACCGGCCCGTCTAGCGCCGCAAAAGGGCCTCATGCTATGAGCATAGAAGATCCC CCACCCCCATCTTCCTATCAGTATCGAGGGAAGCCACGACTTGAGAGATATCTAGGTTTCCTACCTATGCTAGCA TTTGCCGCAACCCTACAAGCATCCTGGGAATCCTTAGGATCCAGTCTTCAAGCAGGGCTGTTGAACGGTGGCCCA GTAGCAATTGTTTATGGCATGCTACTGTCATTTGCCGGCTCTCTGTGCTTAACTTTATCTATGGCAGAAATGGCA TCGATAAACCCTGTTGCCGGTGCTCAATATCACTGGACATATGAGCTCGCGCCATTTGCTCCTCGATTTCTAAGC TTCATTCAAGGCTGGATCACTGTCATAGCATGGTGGGCCAACGTCGCAGTTGGGCCATACTTAGTTGGCACTGAG ATCCAGGGACTACTGGTGCAGAACTACCCTTCCTACAACCCGGAAGGATGGCACGGAACTCTTCTAGTGTTTGCA GTCCTCTTCCTGCCCTTGCTGGTCAATATCTTCGCGCGCCGCCTCCTAGCACCTGTCGAAGTGTTATCAGGTGTT ATTCACATCCTATCATACCCAGCTATCATGGTCGTCATGATCGTTTTAGGGCAACGGCACACAAATGATTTTGTA TGGACTGAATTTGTCACTGACCAGAGTGGATGGCATGACAAAGGGGTGATCTATTCAATTGGATTGCTAACAGCG GCATTCACCCTAAGTAGTTTCGACGGTGTCATTCACATGTCAGAAGAAGTCAACGACGCACCTAGGGCCGTTCCC CGATCAATGGTCTGGGGCTTATGCGTGAACGCCATCCTTGCATTCGGCTTCGCCATAGCCCTGCTATACACTATG GGCGACTTCCAGAAAGCCCTCGACTCACCTACAGGATACCCCATCATTGAAATATTCTATGCCCAGACCGGATCA AAAGCAGCATCCAGCGCAATGATGCTACCGATCCTCCTCTCTGGCTGCTATTCCTCCTTCAACGTCTTAGCGTCA GTCAGTCGACTCACATGGGCGTTTGCGCGCGACGAGGGTTTCCCCTTCTCATCGTTTTTCGCACATGTATCACCT CGGTACAAGATCCCCCTGCGATCTCTTTTCCTAGTGACAACAATTACCGTTCTGATTGCCCTGATCAACATTGGT TCCTCGGCTGCGTTCAATGCCGTCTTGTCTCTGGACACTCTCGCCCTTTACATTTCCTATCTGGTCCCTGTCCTT TTCATGCTGATCAAGCGGGTTCGCTTCCCGAGTGAGATCCGTTATGGTCCGTTTAACTTGGGAAGGTTCGGCATT CCAATTAATACTTTTGCCATGGCGTACGGTACTTATATTACGATCTTCCTTCCCTGGCCTGAGACTCAGCCCGTC ACGGCGAGCGGCATGAATTATGGTGCTCCGGTGTTTGGTATCGCTCTGTTATTTGCGGTGATTGACTGGTTTGTT CGAGGACATAAGAAGTGGAATGGGCCCACAGTTATGGCGTCGCCAAAGTAG |
| Transcript | >Ani_SJS100_1|g1221.t1 ATGGAATACCATGATAACCAAACCGGCCCGTCTAGCGCCGCAAAAGGGCCTCATGCTATGAGCATAGAAGATCCC CCACCCCCATCTTCCTATCAGTATCGAGGGAAGCCACGACTTGAGAGATATCTAGGTTTCCTACCTATGCTAGCA TTTGCCGCAACCCTACAAGCATCCTGGGAATCCTTAGGATCCAGTCTTCAAGCAGGGCTGTTGAACGGTGGCCCA GTAGCAATTGTTTATGGCATGCTACTGTCATTTGCCGGCTCTCTGTGCTTAACTTTATCTATGGCAGAAATGGCA TCGATAAACCCTGTTGCCGGTGCTCAATATCACTGGACATATGAGCTCGCGCCATTTGCTCCTCGATTTCTAAGC TTCATTCAAGGCTGGATCACTGTCATAGCATGGTGGGCCAACGTCGCAGTTGGGCCATACTTAGTTGGCACTGAG ATCCAGGGACTACTGGTGCAGAACTACCCTTCCTACAACCCGGAAGGATGGCACGGAACTCTTCTAGTGTTTGCA GTCCTCTTCCTGCCCTTGCTGGTCAATATCTTCGCGCGCCGCCTCCTAGCACCTGTCGAAGTGTTATCAGGTGTT ATTCACATCCTATCATACCCAGCTATCATGGTCGTCATGATCGTTTTAGGGCAACGGCACACAAATGATTTTGTA TGGACTGAATTTGTCACTGACCAGAGTGGATGGCATGACAAAGGGGTGATCTATTCAATTGGATTGCTAACAGCG GCATTCACCCTAAGTAGTTTCGACGGTGTCATTCACATGTCAGAAGAAGTCAACGACGCACCTAGGGCCGTTCCC CGATCAATGGTCTGGGGCTTATGCGTGAACGCCATCCTTGCATTCGGCTTCGCCATAGCCCTGCTATACACTATG GGCGACTTCCAGAAAGCCCTCGACTCACCTACAGGATACCCCATCATTGAAATATTCTATGCCCAGACCGGATCA AAAGCAGCATCCAGCGCAATGATGCTACCGATCCTCCTCTCTGGCTGCTATTCCTCCTTCAACGTCTTAGCGTCA GTCAGTCGACTCACATGGGCGTTTGCGCGCGACGAGGGTTTCCCCTTCTCATCGTTTTTCGCACATGTATCACCT CGGTACAAGATCCCCCTGCGATCTCTTTTCCTAGTGACAACAATTACCGTTCTGATTGCCCTGATCAACATTGGT TCCTCGGCTGCGTTCAATGCCGTCTTGTCTCTGGACACTCTCGCCCTTTACATTTCCTATCTGGTCCCTGTCCTT TTCATGCTGATCAAGCGGGTTCGCTTCCCGAGTGAGATCCGTTATGGTCCGTTTAACTTGGGAAGGTTCGGCATT CCAATTAATACTTTTGCCATGGCGTACGGTACTTATATTACGATCTTCCTTCCCTGGCCTGAGACTCAGCCCGTC ACGGCGAGCGGCATGAATTATGGTGCTCCGGTGTTTGGTATCGCTCTGTTATTTGCGGTGATTGACTGGTTTGTT CGAGGACATAAGAAGTGGAATGGGCCCACAGTTATGGCGTCGCCAAAGTAG |
| Gene | >Ani_SJS100_1|g1221.t1 ATGGAATACCATGATAACCAAACCGGCCCGTCTAGCGCCGCAAAAGGGCCTCATGCTATGAGCATAGAAGATCCC CCACCCCCATCTTCCTATCAGTATCGAGGGAAGCCACGACTTGAGGTAAGCGGATAGTATCTATATCAATAATGT CCTAATGCTCTCACTGAGCACTAACGTTTTTCAGAGATATCTAGGTTTCCTACCTATGCTAGCATTTGCCGCAAC CCTACAAGCATCCTGGGAATCCTTAGGATCCAGTCTTCAAGCAGGGCTGTTGAACGGTGGCCCAGTAGCAATTGT TTATGGCATGCTACTGTCATTTGCCGGCTCTCTGTGCTTAACTTTATCTATGGCAGAAATGGCATCGATGTACGA GTGGATTCCTACGATGTGTCACAGTTCGTGTCCCTAATCGCTAAACACAGAAACCCTGTTGCCGGTGCTCAATAT CACTGGACATATGAGCTCGCGCCATTTGCTCCTCGATTTCTAAGCTTCATTCAAGGTGGGTACCTTTTGGTCTAA TCAAAGTCTCGATTTGTGTGGCTGATTCGTGATTCTATCCAACAGGCTGGATCACTGTAAGCCTCTAGTAATCCG ATTTCGGCATTGGCGTTGTACACACTCTCATCAGATACAAACTTATAACTAGGTCATAGCATGGTGGGCCAACGT CGCAGTTGGGCCATACTTAGTTGGCACTGAGATCCAGGGACTACTGGTGCAGAACTACCCTTCCTACAACCCGGA AGGATGGCACGGAACTCTTCTAGTGTTTGCAGTCCTCTTCCTGCCCTTGCTGGTCAATATCTTCGCGCGCCGCCT CCTAGCACCTGTCGAAGTGTTATCAGGTGTTATTCACATCCTATCATACCCAGCTATCATGGTCGTCATGATCGT TTTAGGGCAACGGCACACAAATGATTTTGTATGGACTGAATTTGTCACTGACCAGAGTGGATGGCATGACAAAGG GGTGATCTATTCAATTGGATTGCTAACAGCGGCATTCACCCTAAGTAGTAAGTCTCCCTTGCCTATCCAGCATCT CACCAAAATGCTAACCTTCGAAACCCTCCAAACAGGTTTCGACGGTGTCATTCACATGTCAGAAGAAGTCAACGA CGCACCTAGGGCCGTTCCCCGATCAATGGTCTGGGGCTTATGCGTGAACGCCATCCTTGCATTCGGCTTCGCCAT AGCCCTGCTATACACTATGGGCGACTTCCAGAAAGCCCTCGACTCACCTACAGGATACCCCATCATTGAAATATT CTATGCCCAGACCGGATCAAAAGCAGCATCCAGCGCAATGATGCTACCGATCCTCCTCTCTGGCTGCTATTCCTC CTTCAACGTCTTAGCGTCAGTCAGTCGACTCACATGGGCGTTTGCGCGCGACGAGGGTTTCCCCTTCTCATCGTT TTTCGCACATGTATCACCTCGGTACAAGATCCCCCTGCGATCTCTTTTCCTAGTGACAACAATTACCGTTCTGAT TGCCCTGATCAACATTGGTTCCTCGGCTGCGTTCAATGCCGTCTTGTCTCTGGACACTCTCGCCCTTTACATTTC CTATCTGGTCCCTGTCCTTTTCATGCTGATCAAGCGGGTTCGCTTCCCGAGTGAGATCCGTTATGGTCCGTTTAA CTTGGGAAGGTTCGGCATTCCAATTAATACTTTTGCCATGGCGTACGGTACTTATATTACGATCTTCCTTCCCTG GCCTGAGACTCAGCCCGTCACGGCGAGCGGCATGAATTATGGTGCTCCGGTGTTTGGTATCGCTCTGTTATTTGC GGTGATTGACTGGTTTGTTCGAGGACATAAGAAGTGGAATGGGCCCACAGTTATGGCGTCGCCAAAGTAG |