© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1201.t1 |
| Gene name | |
| Location | scaffold_004:313219..314621 |
| Strand | + |
| Gene length (bp) | 1402 |
| Transcript length (bp) | 1299 |
| Coding sequence length (bp) | 1299 |
| Protein length (aa) | 433 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF14572 | Pribosyl_synth | Phosphoribosyl synthetase-associated domain | 2.3E-33 | 314 | 429 |
| PF13793 | Pribosyltran_N | N-terminal domain of ribose phosphate pyrophosphokinase | 8.6E-33 | 6 | 99 |
| PF00156 | Pribosyltran | Phosphoribosyl transferase domain | 1.8E-14 | 272 | 384 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004749 | ribose phosphate diphosphokinase activity | Yes |
| GO:0009165 | nucleotide biosynthetic process | Yes |
| GO:0000287 | magnesium ion binding | Yes |
| GO:1901293 | nucleoside phosphate biosynthetic process | No |
| GO:0043169 | cation binding | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0016778 | diphosphotransferase activity | No |
| GO:0009987 | cellular process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0016740 | transferase activity | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0005488 | binding | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1201.t1 MVRNIVVIGGTSHPQLTQTICNVLGIPPADVLLSKFSVGETRVEIKESVRGKDVYIIQSGGGKVNDLLMELLITI SACKTASAKRVTAVLPLFPYSRQSDIPYNKTGAPLVKSSLAGRQGNNYTFESTPPTPHPGKPDGGSLLNGLNGVD NLQKSLAKAQLDDISNGSPVKKQRPVNGLPRSDTMESLQSEGNRFALNGADEKINNFQPRPGYKQWVAQAGTLVA DLLTCAGADHIITMDLHDPQYQGFFDIPVDNLYGRPLLKSYIQRNIPNYKQAVIVSPDAGGAKRATAIADSMGVE FALIHKERRPTRITDRQNATMMLVGDVKDRTAILIDDLADTSNTITRAAKLLKKEGAAQVYALVTHGILSGDAID RINASALDKVVVTNSVDQADHLRRCPKLEVLEVGHVFAEAIRRVHHGESISTLFQYD* |
| Coding | >Ani_SJS100_1|g1201.t1 ATGGTCCGGAATATCGTTGTTATCGGGGGCACTTCCCACCCGCAATTGACTCAGACCATCTGCAACGTGCTGGGC ATCCCACCGGCAGATGTTCTGCTGTCGAAATTCTCCGTGGGCGAGACCCGAGTGGAAATCAAAGAATCAGTCCGT GGAAAAGATGTCTATATCATTCAGTCCGGTGGTGGAAAGGTGAACGATCTCCTCATGGAGCTTCTGATTACCATC TCGGCTTGCAAGACCGCCTCCGCCAAGAGAGTCACTGCGGTCCTCCCGCTTTTCCCGTACTCGCGTCAGAGTGAC ATCCCCTACAACAAGACCGGAGCTCCTTTAGTCAAGTCATCCCTTGCGGGGAGGCAAGGCAACAACTACACCTTT GAGAGTACCCCGCCTACCCCACACCCGGGGAAGCCTGATGGTGGAAGCCTTCTGAACGGTCTGAACGGCGTCGAC AACTTGCAGAAGAGCCTGGCCAAGGCTCAATTGGACGACATCAGCAATGGCAGCCCTGTGAAGAAGCAGCGCCCG GTCAATGGTCTTCCCCGCAGCGATACCATGGAGTCCCTGCAGTCTGAAGGTAACCGGTTCGCACTCAACGGCGCC GATGAGAAGATCAACAACTTCCAGCCCCGCCCCGGCTACAAGCAGTGGGTGGCTCAGGCCGGTACCTTGGTCGCG GACCTGCTCACCTGCGCTGGTGCAGACCACATCATCACCATGGACCTCCATGACCCTCAGTACCAGGGATTCTTC GACATTCCGGTTGACAACTTGTACGGCCGCCCACTCCTCAAGAGTTACATCCAGCGGAACATCCCCAACTACAAG CAGGCTGTTATCGTCAGTCCTGATGCTGGTGGTGCGAAGCGTGCCACGGCGATTGCCGACAGCATGGGCGTCGAG TTCGCCCTTATTCACAAGGAACGTCGTCCTACTCGTATAACGGATCGACAGAACGCTACCATGATGCTGGTGGGA GATGTCAAGGATCGGACGGCGATCCTGATCGATGACCTGGCGGACACGTCAAACACCATCACTAGAGCGGCGAAG CTCCTCAAGAAGGAAGGGGCTGCCCAGGTCTATGCTCTGGTCACCCACGGAATCTTGAGCGGAGATGCTATTGAT CGGATCAATGCAAGCGCTCTCGACAAGGTGGTGGTTACCAACAGCGTTGACCAGGCAGATCATTTGCGCAGATGC CCTAAGTTGGAGGTTTTGGAAGTCGGTCACGTCTTCGCCGAGGCTATTCGCCGTGTCCACCACGGTGAGAGTATC AGTACTCTGTTCCAATACGACTAA |
| Transcript | >Ani_SJS100_1|g1201.t1 ATGGTCCGGAATATCGTTGTTATCGGGGGCACTTCCCACCCGCAATTGACTCAGACCATCTGCAACGTGCTGGGC ATCCCACCGGCAGATGTTCTGCTGTCGAAATTCTCCGTGGGCGAGACCCGAGTGGAAATCAAAGAATCAGTCCGT GGAAAAGATGTCTATATCATTCAGTCCGGTGGTGGAAAGGTGAACGATCTCCTCATGGAGCTTCTGATTACCATC TCGGCTTGCAAGACCGCCTCCGCCAAGAGAGTCACTGCGGTCCTCCCGCTTTTCCCGTACTCGCGTCAGAGTGAC ATCCCCTACAACAAGACCGGAGCTCCTTTAGTCAAGTCATCCCTTGCGGGGAGGCAAGGCAACAACTACACCTTT GAGAGTACCCCGCCTACCCCACACCCGGGGAAGCCTGATGGTGGAAGCCTTCTGAACGGTCTGAACGGCGTCGAC AACTTGCAGAAGAGCCTGGCCAAGGCTCAATTGGACGACATCAGCAATGGCAGCCCTGTGAAGAAGCAGCGCCCG GTCAATGGTCTTCCCCGCAGCGATACCATGGAGTCCCTGCAGTCTGAAGGTAACCGGTTCGCACTCAACGGCGCC GATGAGAAGATCAACAACTTCCAGCCCCGCCCCGGCTACAAGCAGTGGGTGGCTCAGGCCGGTACCTTGGTCGCG GACCTGCTCACCTGCGCTGGTGCAGACCACATCATCACCATGGACCTCCATGACCCTCAGTACCAGGGATTCTTC GACATTCCGGTTGACAACTTGTACGGCCGCCCACTCCTCAAGAGTTACATCCAGCGGAACATCCCCAACTACAAG CAGGCTGTTATCGTCAGTCCTGATGCTGGTGGTGCGAAGCGTGCCACGGCGATTGCCGACAGCATGGGCGTCGAG TTCGCCCTTATTCACAAGGAACGTCGTCCTACTCGTATAACGGATCGACAGAACGCTACCATGATGCTGGTGGGA GATGTCAAGGATCGGACGGCGATCCTGATCGATGACCTGGCGGACACGTCAAACACCATCACTAGAGCGGCGAAG CTCCTCAAGAAGGAAGGGGCTGCCCAGGTCTATGCTCTGGTCACCCACGGAATCTTGAGCGGAGATGCTATTGAT CGGATCAATGCAAGCGCTCTCGACAAGGTGGTGGTTACCAACAGCGTTGACCAGGCAGATCATTTGCGCAGATGC CCTAAGTTGGAGGTTTTGGAAGTCGGTCACGTCTTCGCCGAGGCTATTCGCCGTGTCCACCACGGTGAGAGTATC AGTACTCTGTTCCAATACGACTAA |
| Gene | >Ani_SJS100_1|g1201.t1 ATGGTCCGGAATATCGTTGTTATCGGGGGCACTTCCCACCCGCAATTGACTCAGACCATCTGCAACGTGCTGGGC ATCCCACCGGCAGATGTTCTGCTGTCGAAATTCTCCGTGGGCGAGACCCGAGTGGAAATCAAAGAATCAGTCCGT GGAAAAGATGTCTATATCATTCAGTCCGGTGGTGGAAAGGTGAACGATCTCCTCATGGAGCTTCTGATTACCATC TCGGCTTGCAAGACCGCCTCCGCCAAGAGAGTCACTGCGGTCCTCCCGCTTTTCCCGTACTCGCGTCAGAGTGAC ATCCCCTACAACAAGACCGGAGCTCCTTTAGTCAAGTCATCCCTTGCGGGGAGGCAAGGCAACAACTACACCTTT GAGAGTACCCCGCCTACCCCACACCCGGGGAAGCCTGATGGTGGAAGCCTTCTGAACGGTCTGAACGGCGTCGAC AACTTGCAGAAGAGCCTGGCCAAGGCTCAATTGGACGACATCAGCAATGGCAGCCCTGTGAAGAAGCAGCGCCCG GTCAATGGTCTTCCCCGCAGCGATACCATGGAGTCCCTGCAGTCTGAAGGTAACCGGTTCGCACTCAACGGCGCC GATGAGAAGATCAACAACTTCCAGCCCCGCCCCGGCTACAAGCAGTGGGTGGCTCAGGCCGGTACCTTGGTCGCG GACCTGCTCACCTGCGCTGGTGCAGACCACATCATCACCATGGACCTCCATGACCCTCAGTACCAGGGATTCTTC GACATTCCGGTTGACAACTTGTACGGCCGCCCACTCCTCAAGAGTTACATCCAGCGGAACATCCCCAACTACAAG CAGGCTGTTATCGTCAGTCCTGATGCTGGTGGTGCGAAGCGTGCCACGGCGATTGCCGACAGCATGGGCGTCGAG TTCGCCCTTATTCACAAGGTTGGTATTCGGCCTAATGACTTCTTTACATGGTAGCACTGACCCCTTTCAGGAACG TCGTCCTACTCGTATAACGGATCGACAGAACGCTACCATGATGCTGGTGGGAGATGTCAAGGATCGGACGGCGAT CCTGATCGATGACCTGGCGGACACGTCAAACACCATCACTAGAGCGGCGAAGCTCCTCAAGAAGGAAGGGGCTGC CCAGGTCTATGCTCTGGTCACCCACGGAATCTTGAGCGGAGATGCTATTGATCGGATCAATGCAAGCGCTCTCGA CAAGGTGGTGGTTACCAACAGCGTTGACCAGGCAGATCATTTGCGCAGATGCCCTAAGTTGGAGGTTTTGGAAGT CGGTCACGTCTTCGCCGAGGTAAGTTTCATTGGTAAGCCCTGCTTATGAGGCTTGACTAACGACCTGTAGGCTAT TCGCCGTGTCCACCACGGTGAGAGTATCAGTACTCTGTTCCAATACGACTAA |