Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g1200.t1
Gene name
Location	scaffold_004:310746..311489
Strand	-
Gene length (bp)	743
Transcript length (bp)	615
Coding sequence length (bp)	615
Protein length (aa)	205

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10181	PIG-H	GPI-GlcNAc transferase complex, PIG-H component	5.4E-28	114	179

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	32	54	22
2	84	106	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g1200.t1 MPSRLILRRPSPTTVSFTVSNASRRTSTPAKALFYLQVLLRAVTFLCVLLLDAAKFRRAVFMEDGSWIRWTTIWS SSLGISVCRIADAYSSVVVVLASAVVFYGVFRKGYTEESLLVIRGLGIQTSTSSQTYLSKASTRFIPTTQIQDIV IHEAFKGFEVRFYLAVIVEGESEVVVVFPKLLPNRQILEEVWRGSRSCLYDSKS*
Coding	>Ani_SJS100_1\|g1200.t1 ATGCCGAGTCGCCTTATATTACGGCGTCCGTCCCCGACGACCGTATCATTCACAGTTTCCAATGCCTCCAGGCGC ACAAGCACGCCCGCAAAGGCCCTTTTCTACCTCCAAGTTCTGTTGCGCGCAGTGACCTTTCTTTGTGTGCTCCTC CTTGATGCTGCGAAATTCCGCCGTGCGGTTTTTATGGAAGATGGTTCATGGATACGTTGGACAACAATTTGGTCG AGTTCACTGGGGATATCCGTCTGTCGCATCGCGGATGCGTACAGCTCTGTCGTGGTAGTGTTGGCCAGCGCAGTG GTTTTCTACGGTGTTTTCAGGAAGGGTTACACAGAAGAGTCGCTCCTGGTTATACGCGGTCTCGGTATTCAGACG TCTACCTCCTCTCAGACCTACCTGTCAAAGGCTTCGACGAGGTTCATACCCACTACGCAGATTCAGGATATCGTG ATACACGAAGCTTTCAAGGGCTTCGAGGTTCGATTCTATCTTGCAGTAATTGTTGAAGGTGAAAGCGAAGTGGTT GTGGTGTTTCCTAAACTGTTACCAAATCGGCAAATCCTAGAGGAGGTTTGGAGGGGTTCACGGAGCTGTTTGTAT GATTCAAAGTCGTGA
Transcript	>Ani_SJS100_1\|g1200.t1 ATGCCGAGTCGCCTTATATTACGGCGTCCGTCCCCGACGACCGTATCATTCACAGTTTCCAATGCCTCCAGGCGC ACAAGCACGCCCGCAAAGGCCCTTTTCTACCTCCAAGTTCTGTTGCGCGCAGTGACCTTTCTTTGTGTGCTCCTC CTTGATGCTGCGAAATTCCGCCGTGCGGTTTTTATGGAAGATGGTTCATGGATACGTTGGACAACAATTTGGTCG AGTTCACTGGGGATATCCGTCTGTCGCATCGCGGATGCGTACAGCTCTGTCGTGGTAGTGTTGGCCAGCGCAGTG GTTTTCTACGGTGTTTTCAGGAAGGGTTACACAGAAGAGTCGCTCCTGGTTATACGCGGTCTCGGTATTCAGACG TCTACCTCCTCTCAGACCTACCTGTCAAAGGCTTCGACGAGGTTCATACCCACTACGCAGATTCAGGATATCGTG ATACACGAAGCTTTCAAGGGCTTCGAGGTTCGATTCTATCTTGCAGTAATTGTTGAAGGTGAAAGCGAAGTGGTT GTGGTGTTTCCTAAACTGTTACCAAATCGGCAAATCCTAGAGGAGGTTTGGAGGGGTTCACGGAGCTGTTTGTAT GATTCAAAGTCGTGA
Gene	>Ani_SJS100_1\|g1200.t1 ATGCCGAGTCGCCTTATATTACGGCGTCCGTCCCCGACGACCGTATCATTCACAGTTTCCAATGCCTCCAGGCGC ACAAGCACGCCCGCAAAGGCCCTTTTCTACCTCCAAGTTCTGTTGCGCGCAGTGACCTTTCTTTGTGTGCTCCTC CTTGATGCTGCGAAATTCCGCCGTGCGGTTTTTATGGAAGATGGTTCATGGATACGTTGGACAACAATTTGGTCG AGTTCACTGGGGATATCCGTCTGTCGCATCGCGGATGCGTACAGCTCTGTCGTGGTAGTGTTGGCCAGCGCAGTG GTTTTCTACGGTGTTTTCAGGAAGGGTTACACAGGTTCGTCTGAGCTGCCTCCAGCAAAGGGTCTGGCTTGATAC TGACTGCACTTCGCCCCAACACAGAAGAGTCGCTCCTGGTTATACGCGGTCTCGGTATTCAGACGTCTACCTCCT CTCAGACCTACCTGTCAAAGGCTTCGACGAGGTTCATACCCACTACGCAGATTCAGGATATCGTGATACACGAAG CTTTCAAGGGCTTCGAGGTTCGATTCTATCTTGCAGTAATTGTTGAAGGTGAAAGCGAAGTGGTTGTGGTGTTTC CTGTGAGTACCTACCTAAGCACTTACCCATCGGACCTGTCGTCTCGGGTTTCTAATATGAGCCAGAAACTGTTAC CAAATCGGCAAATCCTAGAGGAGGTTTGGAGGGGTTCACGGAGCTGTTTGTATGATTCAAAGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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