Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g11925.t1
Gene name
Location	scaffold_852:413..1175
Strand	-
Gene length (bp)	762
Transcript length (bp)	585
Coding sequence length (bp)	585
Protein length (aa)	195

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	5	24	19
2	71	93	22
3	122	144	22
4	157	179	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g11925.t1 MPGDAEYWIMGTYLPCGIALFHASNSRFYHVAKLQKGYIIRSSGGNDLSSTSRGKLGAVDRFRRLAYTTKILVLV TVASLVQVFLTVLMWLISRKWHRTWGIPGTEVHGTEMQQKSEMGRGWEWWPGVLGQFFWSWIVGPVVLWKSRHIH DTHGWRVQTIGCVIANLPATPMWLIALYVPAMEPVNQYWLPPQW*
Coding	>Ani_SJS100_1\|g11925.t1 ATGCCCGGAGATGCCGAGTACTGGATCATGGGCACCTATCTACCGTGTGGCATTGCCCTGTTCCACGCGTCGAAC AGTCGCTTCTACCACGTGGCAAAGCTCCAGAAAGGCTATATCATTCGTAGTAGTGGCGGGAATGATTTATCCTCC ACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACCAAGATCCTCGTGCTTGTT ACGGTGGCGTCGCTCGTTCAGGTGTTTCTCACGGTCTTGATGTGGCTCATCTCTCGCAAATGGCATCGTACTTGG GGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTGG CCTGGCGTGTTGGGACAGTTCTTCTGGTCCTGGATTGTGGGCCCCGTCGTCCTCTGGAAATCCCGTCACATCCAC GACACCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTGGCTCATC GCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGTAG
Transcript	>Ani_SJS100_1\|g11925.t1 ATGCCCGGAGATGCCGAGTACTGGATCATGGGCACCTATCTACCGTGTGGCATTGCCCTGTTCCACGCGTCGAAC AGTCGCTTCTACCACGTGGCAAAGCTCCAGAAAGGCTATATCATTCGTAGTAGTGGCGGGAATGATTTATCCTCC ACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACCAAGATCCTCGTGCTTGTT ACGGTGGCGTCGCTCGTTCAGGTGTTTCTCACGGTCTTGATGTGGCTCATCTCTCGCAAATGGCATCGTACTTGG GGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTGG CCTGGCGTGTTGGGACAGTTCTTCTGGTCCTGGATTGTGGGCCCCGTCGTCCTCTGGAAATCCCGTCACATCCAC GACACCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTGGCTCATC GCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGTAG
Gene	>Ani_SJS100_1\|g11925.t1 ATGCCCGGAGATGCCGAGTACTGGATCATGGGCACCTATCTACCGTGTGGCATTGCCCTGTTCCACGCGTCGAAC AGTCGCTTCTACCACGTGGCAAAGCTCCAGAAAGGCTATATCATTCGTAGTAGTGGCGGGAATGATTTATCCTCC ACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACCAAGATCCTCGTGCTTGTT ACGGTGGCGTCGCTCGTTCAGGTAAAACGGCCACCGCCTACTCCTATTGACAATCATATCGGTGTCTAATTGAAT CATTAGGTGTTTCTCACGGTCTTGATGTGGCTCATCTCTCGCAAATGGCATCGTACTTGGGGGATTCCAGGCACC GAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAACTCTTCCAACAT ACGCCCGGCGCATGTACGACGAGAGCTGCGCGCTAACCGATATGCAGGTGGCCTGGCGTGTTGGGACAGTTCTTC TGGTCCTGGATTGTGGGCCCCGTCGTCCTCTGGAAATCCCGTCACATCCACGACACCCACGGCTGGCGAGTCCAG ACGATAGGCTGCGTCATCGCCAAGTGAGTCAATCGGTCCGATGAGGTCTGTCGCACGACTGATCCGTCATCTAGT CTCCCGGCGACGCCGATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCG CCCCAGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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