Protein ID | Ani_SJS100_1|g1191.t1 |
Gene name | |
Location | scaffold_004:291899..293756 |
Strand | + |
Gene length (bp) | 1857 |
Transcript length (bp) | 1665 |
Coding sequence length (bp) | 1665 |
Protein length (aa) | 555 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00867 | XPG_I | XPG I-region | 1.2E-22 | 115 | 204 |
PF18380 | GEN1_C | Holliday junction resolvase Gen1 C-terminal domain | 9.2E-22 | 372 | 477 |
PF00752 | XPG_N | XPG N-terminal domain | 2.3E-06 | 1 | 90 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004518 | nuclease activity | Yes |
GO:0016788 | hydrolase activity, acting on ester bonds | No |
GO:0003824 | catalytic activity | No |
GO:0016787 | hydrolase activity | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 1494 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1191.t1 MGIPGLIHAIGAGERISLSRLAITHLERTARPIRIAVDISIWLFQVQAGRGGRNPELRTLFYRLLKILALPIHPL FVYDGKNKPPFKRGKAVSSRSYGNAPIIRLSKILVDLFKFPRHEAPGEAEAECARLQRAGVVDAVMTNDVDALMF GSTFTVMGFSKESGSSTGAATHVTCYRMNTAGDPSSVKLNRAGMILFAMLSGGDYLPSGVPKCGSKLAGEIAKAG FGADLLEILESDGAELDTRLSDWRERLQYELEENESGYFQTKHKVVRIPDTFPDRTILSYYANPVVSSTGDIKAL QQYLSNAWDKDIDVVELRRFAADAFEWNYRSGARKVTRLLSEPLLSYRLRLGRQASAFPANRPRLSNCDVPMLQK IYKSRSSYSTDGLTEYQLDMVPVDVVGLDILADEPNPPIPSQESTVSGDEEEELEDNVVSVPQSPVKKRVIKRYD PYVSEKVWVFEALATIGLPEVVENWKREQAEKSAPKKTTTRKTGPRKKGPIDPNMKRGSILKYGTLTKERTEISR HKSAQLLEAAVSAKATAVPSLSSSPAAID* |
Coding | >Ani_SJS100_1|g1191.t1 ATGGGGATTCCGGGGCTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCAT TTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGG GGTGGTCGAAATCCGGAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTT TTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCA CCAATCATTCGGCTCTCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAA GCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTT GGCTCAACATTCACCGTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGC TACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTA AGTGGCGGTGATTACTTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGC TTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAA CGACTCCAGTATGAGTTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGAT ACTTTTCCCGACCGGACAATTTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTT CAACAATACCTGTCAAATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTT GAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGC CTTGGAAGACAAGCATCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAA ATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTT GTTGGCTTGGATATTCTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAG GAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGAC CCTTATGTCTCAGAGAAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGG AAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCT ATAGACCCGAATATGAAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGC CACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCCA GCAGCCATTGACTGA |
Transcript | >Ani_SJS100_1|g1191.t1 ATGGGGATTCCGGGGCTTATTCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCAT TTGGAGCGCACAGCAAGGCCTATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGG GGTGGTCGAAATCCGGAGCTACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTT TTTGTATATGATGGCAAGAACAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCA CCAATCATTCGGCTCTCCAAGATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAA GCAGAGTGTGCAAGGCTGCAAAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTT GGCTCAACATTCACCGTCATGGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGC TACCGCATGAACACCGCTGGTGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTA AGTGGCGGTGATTACTTACCGTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGC TTTGGCGCAGATCTTCTGGAAATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAA CGACTCCAGTATGAGTTGGAAGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGAT ACTTTTCCCGACCGGACAATTTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTT CAACAATACCTGTCAAATGCCTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTT GAGTGGAATTACCGCTCTGGGGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGC CTTGGAAGACAAGCATCGGCCTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAA ATCTATAAGAGCAGGTCCAGCTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTT GTTGGCTTGGATATTCTTGCTGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAG GAAGAGGAATTGGAGGATAACGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGAC CCTTATGTCTCAGAGAAGGTGTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGG AAACGAGAGCAAGCTGAGAAGTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCT ATAGACCCGAATATGAAGCGAGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGC CACAAAAGCGCGCAGCTCTTAGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCCA GCAGCCATTGACTGA |
Gene | >Ani_SJS100_1|g1191.t1 ATGGGGATTCCGGGGTAAGTCAGCCAGTTTTGTAGGTGCTGTTTGTGGAACTTTGTCTTGAGGGAGAAATATATT ATCCCCTTCCAGTGCGCAAACAGCACTTGTTCAATTAGTAGTTCAACAGCTAACCCACTAACCACAAAGGCTTAT TCATGCCATTGGCGCTGGTGAACGTATCTCCTTGTCTAGATTGGCCATAACTCATTTGGAGCGCACAGCAAGGCC TATTCGTATTGCTGTGGACATCTCGATATGGTTGTTCCAAGTGCAAGCTGGCCGGGGTGGTCGAAATCCGGAGCT ACGGACACTATTCTACAGGCTATTGAAGATTCTGGCGCTTCCAATCCATCCTCTTTTTGTATATGATGGCAAGAA CAAGCCGCCTTTCAAGAGAGGCAAAGCCGTGTCAAGTCGCAGTTACGGGAATGCACCAATCATTCGGCTCTCCAA GATCCTAGTTGATCTGTTCAAATTTCCGCGCCATGAGGCGCCAGGAGAAGCAGAAGCAGAGTGTGCAAGGCTGCA AAGAGCAGGAGTTGTTGATGCAGTTATGACCAATGACGTTGACGCTCTAATGTTTGGCTCAACATTCACCGTCAT GGGGTTTTCGAAGGAAAGCGGTAGTAGTACTGGGGCTGCAACACATGTTACCTGCTACCGCATGAACACCGCTGG TGATCCTTCAAGTGTGAAGCTTAATCGTGCAGGCATGATCTTGTTTGCCATGTTAAGTGGCGGTGATTACTTACC GTCGGGAGTCCCTAAATGCGGTAGCAAGCTCGCTGGCGAGATTGCCAAAGCTGGCTTTGGCGCAGATCTTCTGGA AATCCTGGAGTCAGACGGTGCCGAGCTCGATACGAGACTAAGTGATTGGAGAGAACGACTCCAGTATGAGTTGGA AGAAAACGAAAGTGGTTACTTCCAGACCAAGCACAAGGTTGTCCGAATTCCGGATACTTTTCCCGACCGGACAAT TTTGTCATATTATGCAAATCCTGTGGTTTCATCGACCGGCGATATCAAAGCCCTTCAACAATACCTGTCAAATGC CTGGGACAAGGACATAGACGTTGTCGAGCTGAGGAGATTTGCTGCCGACGCCTTTGAGTGGAATTACCGCTCTGG GGCTAGGAAAGTGACCAGATTACTTTCTGAGCCGCTTCTGTCTTACCGACTACGCCTTGGAAGACAAGCATCGGC CTTTCCCGCGAACCGCCCTAGGTTATCAAACTGCGATGTGCCAATGCTGCAGAAAATCTATAAGAGCAGGTCCAG CTATAGCACCGATGGCTTAACGGAGTATCAACTGGATATGGTTCCCGTCGACGTTGTTGGCTTGGATATTCTTGC TGATGAGCCAAACCCTCCAATCCCCTCTCAAGAGTCGACAGTCTCAGGTGACGAGGAAGAGGAATTGGAGGATAA CGTGGTATCGGTGCCTCAATCTCCGGTCAAAAAACGTGTCATAAAGCGCTATGACCCTTATGTCTCAGAGAAGGT GTGGGTATTCGAAGCCCTGGCCACTATAGGACTCCCGGAAGTCGTGGAGAATTGGAAACGAGAGCAAGCTGAGAA GTCGGCACCGAAGAAGACAACGACACGAAAGACAGGACCTCGGAAAAAGGGGCCTATAGACCCGAATATGAAGCG AGGCAGCATTTTGAAATATGGAACCCTCACGAAGGAGCGAACTGAAATATCCCGCCACAAAAGCGCGCAGCTCTT AGAGGCCGCAGTCTCTGCTAAAGCAACTGCTGTACCCAGTCTGTCGAGTTCCCGTCAGTCTCTAGATTCTCCTAA TCCTTCAAGGAAGCCACCAGCGTCTGACATATCTATACAGCAGCAGCCATTGACTGA |