Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g11892.t1
Gene name
Location	scaffold_705:131..914
Strand	+
Gene length (bp)	783
Transcript length (bp)	783
Coding sequence length (bp)	783
Protein length (aa)	261

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00505	HMG_box	HMG (high mobility group) box	1.0E-10	32	99

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 47	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
HMG

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g11892.t1 MQHIPVRDMYAWVDRPVETRRQEALQRHKRVPRPLNSFILYRLAYSDRVKYWLGRNDHQTISRLSGQSWKMEAPH IRQQYETLAEKEKRNHARAHPGYRFSPSNKRGQPRTAKGRSQELALRSKAFPNLGQNPQPTAWSPSADNDRASER STEASPAEEGTLIHSDSLNPDGFIPLGSAASVWEHWMSYSQTTSADHGSKGTQPCLPVATGQTEIPAIACFVPQP AAPGINAANSRSASLPLSVPYEMYSFCEEWPIEGK*
Coding	>Ani_SJS100_1\|g11892.t1 ATGCAGCACATTCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGACGCGCCGCCAGGAGGCACTG CAACGGCATAAAAGAGTCCCACGCCCACTGAATTCATTCATACTGTACCGGCTGGCGTACAGTGATCGAGTAAAA TACTGGCTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTGGAAGATGGAAGCCCCTCAC ATTCGGCAGCAATACGAGACGCTCGCGGAGAAGGAGAAACGGAACCATGCCAGGGCACATCCGGGATATCGCTTT TCGCCGTCAAACAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTTGGCGTTGCGCTCGAAGGCG TTCCCTAACCTTGGCCAGAATCCACAGCCTACCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGC TCAACAGAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAATCCAGATGGCTTTATACCA CTGGGCAGTGCCGCCTCGGTATGGGAGCATTGGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAA GGCACCCAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGCTTGCTTTGTTCCCCAGCCT GCAGCCCCTGGAATCAATGCTGCCAATAGTCGGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGT TTTTGTGAGGAATGGCCTATCGAAGGAAAGTAG
Transcript	>Ani_SJS100_1\|g11892.t1 ATGCAGCACATTCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGACGCGCCGCCAGGAGGCACTG CAACGGCATAAAAGAGTCCCACGCCCACTGAATTCATTCATACTGTACCGGCTGGCGTACAGTGATCGAGTAAAA TACTGGCTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTGGAAGATGGAAGCCCCTCAC ATTCGGCAGCAATACGAGACGCTCGCGGAGAAGGAGAAACGGAACCATGCCAGGGCACATCCGGGATATCGCTTT TCGCCGTCAAACAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTTGGCGTTGCGCTCGAAGGCG TTCCCTAACCTTGGCCAGAATCCACAGCCTACCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGC TCAACAGAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAATCCAGATGGCTTTATACCA CTGGGCAGTGCCGCCTCGGTATGGGAGCATTGGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAA GGCACCCAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGCTTGCTTTGTTCCCCAGCCT GCAGCCCCTGGAATCAATGCTGCCAATAGTCGGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGT TTTTGTGAGGAATGGCCTATCGAAGGAAAGTAG
Gene	>Ani_SJS100_1\|g11892.t1 ATGCAGCACATTCCGGTTAGAGACATGTACGCCTGGGTGGACCGCCCGGTCGAGACGCGCCGCCAGGAGGCACTG CAACGGCATAAAAGAGTCCCACGCCCACTGAATTCATTCATACTGTACCGGCTGGCGTACAGTGATCGAGTAAAA TACTGGCTCGGCCGGAATGACCATCAGACCATCTCCAGACTCAGCGGACAGAGCTGGAAGATGGAAGCCCCTCAC ATTCGGCAGCAATACGAGACGCTCGCGGAGAAGGAGAAACGGAACCATGCCAGGGCACATCCGGGATATCGCTTT TCGCCGTCAAACAAGCGGGGACAACCGCGGACCGCAAAAGGCCGTTCTCAGGAGTTGGCGTTGCGCTCGAAGGCG TTCCCTAACCTTGGCCAGAATCCACAGCCTACCGCTTGGTCCCCTTCGGCGGATAATGATCGCGCTAGTGAACGC TCAACAGAAGCTTCTCCTGCGGAAGAGGGAACCCTCATCCACAGCGATTCCTTGAATCCAGATGGCTTTATACCA CTGGGCAGTGCCGCCTCGGTATGGGAGCATTGGATGTCCTATTCCCAGACGACCTCTGCCGATCATGGCTCCAAA GGCACCCAGCCTTGTTTGCCTGTCGCCACGGGGCAAACAGAGATACCTGCCATTGCTTGCTTTGTTCCCCAGCCT GCAGCCCCTGGAATCAATGCTGCCAATAGTCGGTCTGCTTCACTGCCACTGTCTGTTCCGTATGAGATGTATAGT TTTTGTGAGGAATGGCCTATCGAAGGAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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