Protein ID | Ani_SJS100_1|g11867.t1 |
Gene name | |
Location | scaffold_624:373..2025 |
Strand | - |
Gene length (bp) | 1652 |
Transcript length (bp) | 1527 |
Coding sequence length (bp) | 1527 |
Protein length (aa) | 509 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | 3.5E-24 | 319 | 450 |
PF00098 | zf-CCHC | Zinc knuckle | 6.4E-05 | 171 | 187 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0003676 | nucleic acid binding | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0043169 | cation binding | No |
GO:0046872 | metal ion binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0043167 | ion binding | No |
GO:0046914 | transition metal ion binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
Zinc finger, CCHC-type |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11867.t1 MADTENKRPSAGPIRTAVEGEIRTMENYTNWRCRAVTVDPKNTSRIRIACRDEAEHQLVKKVAETKVGAGARVLR DELYPIKVDSVNRTAVLDENGDIRAGAVAAFGEENEASIAKIAWLSRKENAKAYGSMVVYLTKGSDARRLLADGF FHAGGESGVTSTFEYRPRPMQCYNCQEIGHKAFQCKNAQRCAKCAAEGHHHTNTVGSSTLRIMNKTLQVIQLNVR KQGAVHESLMNNEETQNAVALAIQEPQARRIQGRLLTTPMGHHRWTKMVPSTWREGRWAIRSMLWINKDVEAEQV PIESPDLTAAVIRLPERLIFMASVYVEGENASALNDTCNHLLNTITNVRRDTGAVVEILIMGDFNRQDQLWGGDD VSLRRQGEADPIIDLMNECALSSLLKRGTKTWHGGGYSGDCESTIDLVLASDNLTDSVIKCAILGTEHGSDHCAI ETVFDAPWSLPKHQGRLLLKNAPWKEINARIANTLAATPSEGTVQQKTDRLIGGGPLI* |
Coding | >Ani_SJS100_1|g11867.t1 ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC CACACAAACACTGTCGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGA AAACAGGGGGCAGTGCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAA CCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCC TCTACTTGGAGGGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTG CCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTAC GTGGAAGGGGAGAATGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGA GATACGGGTGCGGTGGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGAC GTGTCTTTGAGAAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTC AAACGAGGCACAAAGACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCC TCGGACAACCTAACAGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATT GAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAA GAGATCAATGCCAGGATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGA CTCATCGGTGGTGGACCGCTGATTTAA |
Transcript | >Ani_SJS100_1|g11867.t1 ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC CACACAAACACTGTCGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGA AAACAGGGGGCAGTGCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAA CCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCC TCTACTTGGAGGGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTG CCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTAC GTGGAAGGGGAGAATGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGA GATACGGGTGCGGTGGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGAC GTGTCTTTGAGAAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTC AAACGAGGCACAAAGACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCC TCGGACAACCTAACAGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATT GAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAA GAGATCAATGCCAGGATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGA CTCATCGGTGGTGGACCGCTGATTTAA |
Gene | >Ani_SJS100_1|g11867.t1 ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC CACAGTAGCTGTGATCAAACGATTCCAAAGTGCATTCCATGCGGAGGCCCTCACGAATCGTACAGCAAACACTGT CGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGAAAACAGGGGGCAGT GCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAACCCCAGGCGAGGAG GATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTTGGAGGGA AGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTGCCAATAGAGTCCCC GGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTACGTGGAAGGGGAGAA TGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGAGATACGGGTGCGGT GGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTTTGAGAAG ACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTCAAACGAGGCACAAA GACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCCTCGGACAACCTAAC AGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATTGAGACCGTCTTTGA TGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAAGAGATCAATGCCAG GATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGACTCATGTCAGCAGT CTCGGAAACAGTGCAGGCGCTAACACCAAAGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCGCTGATTT AA |