Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11867.t1
Gene name
Locationscaffold_624:373..2025
Strand-
Gene length (bp)1652
Transcript length (bp)1527
Coding sequence length (bp)1527
Protein length (aa) 509

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 3.5E-24 319 450
PF00098 zf-CCHC Zinc knuckle 6.4E-05 171 187

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003676 nucleic acid binding Yes
GO:0008270 zinc ion binding Yes
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Zinc finger, CCHC-type

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11867.t1
MADTENKRPSAGPIRTAVEGEIRTMENYTNWRCRAVTVDPKNTSRIRIACRDEAEHQLVKKVAETKVGAGARVLR
DELYPIKVDSVNRTAVLDENGDIRAGAVAAFGEENEASIAKIAWLSRKENAKAYGSMVVYLTKGSDARRLLADGF
FHAGGESGVTSTFEYRPRPMQCYNCQEIGHKAFQCKNAQRCAKCAAEGHHHTNTVGSSTLRIMNKTLQVIQLNVR
KQGAVHESLMNNEETQNAVALAIQEPQARRIQGRLLTTPMGHHRWTKMVPSTWREGRWAIRSMLWINKDVEAEQV
PIESPDLTAAVIRLPERLIFMASVYVEGENASALNDTCNHLLNTITNVRRDTGAVVEILIMGDFNRQDQLWGGDD
VSLRRQGEADPIIDLMNECALSSLLKRGTKTWHGGGYSGDCESTIDLVLASDNLTDSVIKCAILGTEHGSDHCAI
ETVFDAPWSLPKHQGRLLLKNAPWKEINARIANTLAATPSEGTVQQKTDRLIGGGPLI*
Coding >Ani_SJS100_1|g11867.t1
ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG
GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC
CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT
GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA
GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT
GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC
TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC
CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC
CACACAAACACTGTCGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGA
AAACAGGGGGCAGTGCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAA
CCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCC
TCTACTTGGAGGGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTG
CCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTAC
GTGGAAGGGGAGAATGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGA
GATACGGGTGCGGTGGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGAC
GTGTCTTTGAGAAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTC
AAACGAGGCACAAAGACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCC
TCGGACAACCTAACAGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATT
GAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAA
GAGATCAATGCCAGGATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGA
CTCATCGGTGGTGGACCGCTGATTTAA
Transcript >Ani_SJS100_1|g11867.t1
ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG
GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC
CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT
GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA
GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT
GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC
TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC
CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC
CACACAAACACTGTCGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGA
AAACAGGGGGCAGTGCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAA
CCCCAGGCGAGGAGGATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCC
TCTACTTGGAGGGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTG
CCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTAC
GTGGAAGGGGAGAATGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGA
GATACGGGTGCGGTGGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGAC
GTGTCTTTGAGAAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTC
AAACGAGGCACAAAGACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCC
TCGGACAACCTAACAGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATT
GAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAA
GAGATCAATGCCAGGATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGA
CTCATCGGTGGTGGACCGCTGATTTAA
Gene >Ani_SJS100_1|g11867.t1
ATGGCAGATACTGAAAATAAGAGACCATCAGCAGGCCCAATTCGAACGGCAGTTGAGGGTGAGATCCGGACAATG
GAAAACTACACGAACTGGCGGTGCCGCGCTGTCACCGTGGACCCGAAGAACACCAGCCGGATCAGAATTGCGTGC
CGAGATGAGGCTGAACACCAGTTGGTTAAGAAGGTGGCAGAAACCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGT
GACGAACTGTATCCGATTAAAGTCGACAGTGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGATATCCGAGCA
GGAGCTGTGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCTAAGATTGCATGGCTGAGCAGAAAGGAGAAT
GCGAAGGCCTATGGGTCAATGGTCGTTTATCTGACCAAAGGCAGTGATGCACGGAGGCTCCTGGCCGACGGGTTC
TTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATACCGACCCCGACCGATGCAATGCTACAATTGC
CAAGAGATTGGGCATAAGGCCTTCCAGTGCAAGAACGCGCAGAGATGTGCAAAATGTGCCGCGGAGGGCCATCAC
CACAGTAGCTGTGATCAAACGATTCCAAAGTGCATTCCATGCGGAGGCCCTCACGAATCGTACAGCAAACACTGT
CGGAAGCTCTACCCTTCGCATCATGAATAAGACTCTTCAAGTTATTCAACTGAATGTGAGAAAACAGGGGGCAGT
GCACGAGAGCTTAATGAATAACGAAGAGACTCAGAACGCAGTGGCGTTAGCGATTCAGGAACCCCAGGCGAGGAG
GATTCAAGGCCGGCTCTTGACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTTGGAGGGA
AGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAATAAAGATGTTGAGGCGGAACAAGTGCCAATAGAGTCCCC
GGATCTCACGGCAGCGGTTATCAGGCTTCCCGAGCGACTGATATTCATGGCATCAGTTTACGTGGAAGGGGAGAA
TGCCTCAGCTTTGAACGACACATGCAATCACCTACTCAACACAATCACGAATGTACGGCGAGATACGGGTGCGGT
GGTGGAGATTTTGATTATGGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTTTGAGAAG
ACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCTCTCAGCAGTCTTCTCAAACGAGGCACAAA
GACATGGCATGGCGGAGGATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCCTCGGACAACCTAAC
AGACTCTGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGGACCACTGCGCTATTGAGACCGTCTTTGA
TGCGCCCTGGTCGCTCCCAAAGCATCAGGGACGACTTCTATTGAAAAATGCTCCATGGAAAGAGATCAATGCCAG
GATAGCGAACACTCTTGCCGCCACTCCGTCGGAGGGCACGGTGCAGCAGAAAACTGACCGACTCATGTCAGCAGT
CTCGGAAACAGTGCAGGCGCTAACACCAAAGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCGCTGATTT
AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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