Protein ID | Ani_SJS100_1|g11844.t1 |
Gene name | |
Location | scaffold_563:200..1904 |
Strand | + |
Gene length (bp) | 1704 |
Transcript length (bp) | 1449 |
Coding sequence length (bp) | 1449 |
Protein length (aa) | 483 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 10 | 29 | 19 |
2 | 75 | 97 | 22 |
3 | 126 | 148 | 22 |
4 | 161 | 183 | 22 |
5 | 193 | 215 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11844.t1 MIGTIMPGDAEYWIMGSYLPCGIALFHASNSRFYHVAKLQEGYIIRSSGGNDLSSTRSKLGVVDQFRRLAYTTKI LVLVTVASLVQVFFTVLMWLISRKWHRTWGIPGTEVHGTEMQQKSEMGRGWEWWPGVFGQFFCSWIVGPVVLWKS RHIHDTHGWRVQTMGCIIANLPATPMWLIALYVPAMEPVNQYWLPPQWICLSIWMMEVFAVLLPCREVIRHHAIR QGAFDSIARWEPNTNPFADGTMARRSASILVELAGSGRESWDRSLGSSSSSRDSIFTKRALECVLARNPAPLQDS SAHRDFPGENIAFLTRVAEWKSSLPHAVWDSRISDYGDLTDLIREHFHRALCIYTTFISDRHAQLPINISSQERK ELKNVFEGPAGLLFGDGRSANPAVPFDSPGYGPMPSASPIASIKAESGSLFADNGQVQYWGEIPQTFNATVFDRA EESIKDLVLTNTWPKFVRSCGIAAEVALLAES* |
Coding | >Ani_SJS100_1|g11844.t1 ATGATCGGTACCATCATGCCCGGAGATGCCGAGTACTGGATCATGGGCAGCTATCTACCGTGTGGCATTGCCCTG TTCCACGCGTCGAACAGTCGCTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTATTCGTAGCAGTGGTGGG AATGATTTATCCTCCACGAGGAGCAAGCTCGGTGTCGTTGACCAGTTCCGTCGCCTTGCATACACTACCAAGATC CTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTGTTCTTCACGGTCTTGATGTGGCTTATCTCCCGCAAATGG CACCGCACTTGGGGAATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGC TGGGAGTGGTGGCCTGGTGTGTTTGGACAGTTTTTCTGCTCGTGGATTGTGGGCCCTGTCGTTCTCTGGAAATCC CGTCACATTCATGACACCCACGGCTGGCGAGTCCAGACGATGGGCTGCATCATCGCCAATCTCCCGGCGACGCCG ATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGATCTGC CTCTCTATCTGGATGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGA CAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCCTTTGCTGATGGCACCATGGCCCGCAGG TCAGCCTCCATTCTTGTCGAGCTCGCAGGGTCTGGCCGGGAATCATGGGATAGATCTCTCGGCTCCAGCTCCAGC TCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTCC TCCGCCCATCGCGACTTTCCCGGAGAGAATATTGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCACTGCCC CATGCGGTCTGGGATAGCAGGATCTCAGATTATGGAGATCTTACCGACTTGATTCGGGAGCATTTTCACCGCGCG CTGTGTATTTACACGACCTTCATCAGTGATCGCCATGCGCAGTTACCGATCAACATCTCTTCGCAGGAACGGAAG GAGCTGAAGAACGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGTTCGGCCAATCCCGCCGTTCCG TTCGACTCGCCAGGCTATGGTCCCATGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGGTTCGCTA TTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCCAGACATTCAATGCAACGGTCTTTGACCGAGCC GAGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAA GTTGCTTTGCTGGCGGAAAGCTAG |
Transcript | >Ani_SJS100_1|g11844.t1 ATGATCGGTACCATCATGCCCGGAGATGCCGAGTACTGGATCATGGGCAGCTATCTACCGTGTGGCATTGCCCTG TTCCACGCGTCGAACAGTCGCTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTATTCGTAGCAGTGGTGGG AATGATTTATCCTCCACGAGGAGCAAGCTCGGTGTCGTTGACCAGTTCCGTCGCCTTGCATACACTACCAAGATC CTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTGTTCTTCACGGTCTTGATGTGGCTTATCTCCCGCAAATGG CACCGCACTTGGGGAATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGC TGGGAGTGGTGGCCTGGTGTGTTTGGACAGTTTTTCTGCTCGTGGATTGTGGGCCCTGTCGTTCTCTGGAAATCC CGTCACATTCATGACACCCACGGCTGGCGAGTCCAGACGATGGGCTGCATCATCGCCAATCTCCCGGCGACGCCG ATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGGATCTGC CTCTCTATCTGGATGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGA CAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCCTTTGCTGATGGCACCATGGCCCGCAGG TCAGCCTCCATTCTTGTCGAGCTCGCAGGGTCTGGCCGGGAATCATGGGATAGATCTCTCGGCTCCAGCTCCAGC TCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTCC TCCGCCCATCGCGACTTTCCCGGAGAGAATATTGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCACTGCCC CATGCGGTCTGGGATAGCAGGATCTCAGATTATGGAGATCTTACCGACTTGATTCGGGAGCATTTTCACCGCGCG CTGTGTATTTACACGACCTTCATCAGTGATCGCCATGCGCAGTTACCGATCAACATCTCTTCGCAGGAACGGAAG GAGCTGAAGAACGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGTTCGGCCAATCCCGCCGTTCCG TTCGACTCGCCAGGCTATGGTCCCATGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGGTTCGCTA TTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCCAGACATTCAATGCAACGGTCTTTGACCGAGCC GAGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAA GTTGCTTTGCTGGCGGAAAGCTAG |
Gene | >Ani_SJS100_1|g11844.t1 ATGATCGGTACCATCATGCCCGGAGATGCCGAGTACTGGATCATGGGCAGCTATCTACCGTGTGGCATTGCCCTG TTCCACGCGTCGAACAGTCGCTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTATTCGTAGCAGTGGTGGG AATGATTTATCCTCCACGAGGAGCAAGCTCGGTGTCGTTGACCAGTTCCGTCGCCTTGCATACACTACCAAGATC CTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTAAAATGGCCACCACCTACCCCTATCGACAATCGTATCAGT CTAATAGAATCAATAGGTGTTCTTCACGGTCTTGATGTGGCTTATCTCCCGCAAATGGCACCGCACTTGGGGAAT TCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTATGTAGA CCTTCCAACATGCGCCCGGCACATATACGACGGGAGCTGTGCGCTAACCAGTTTGCAGGTGGCCTGGTGTGTTTG GACAGTTTTTCTGCTCGTGGATTGTGGGCCCTGTCGTTCTCTGGAAATCCCGTCACATTCATGACACCCACGGCT GGCGAGTCCAGACGATGGGCTGCATCATCGCCAAGTGAGTTAATCGGTCCGATGAGGTCTGTCGCACGACTAATC CGTCATCTAGTCTCCCGGCGACGCCGATGTGGCTCATCGCCCTTTATGTTCCCGCCATGGAGCCGGTCAATCAGT ACTGGCTACCGCCCCAGTGGTAGGTGCTCCGAGCTGCCACCAACAGGAAAATAGAAATGAACAAGAAAGAAGCGA GAAAACGGAGCTGACACCTGCAGGATCTGCCTCTCTATCTGGATGATGGAGGTTTTTGCTGTTCTCCTGCCGTGC CGGGAGGTGATACGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAAT CCCTTTGCTGATGGCACCATGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCGCAGGGTCTGGCCGGGAATCA TGGGATAGATCTCTCGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTG GCGCGCAATCCTGCCCCGCTGCAGGATTCCTCCGCCCATCGCGACTTTCCCGGAGAGAATATTGCTTTCCTGACC CGAGTGGCAGAATGGAAGAGCTCACTGCCCCATGCGGTCTGGGATAGCAGGATCTCAGATTATGGAGATCTTACC GACTTGATTCGGGAGCATTTTCACCGCGCGCTGTGTATTTACACGACCTTCATCAGTGATCGCCATGCGCAGTTA CCGATCAACATCTCTTCGCAGGAACGGAAGGAGCTGAAGAACGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGA GACGGGCGTTCGGCCAATCCCGCCGTTCCGTTCGACTCGCCAGGCTATGGTCCCATGCCCTCAGCGTCTCCGATC GCCTCCATCAAGGCCGAGTCCGGTTCGCTATTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCCAG ACATTCAATGCAACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCCTAAG TTTGTTCGAAGTTGCGGCATCGCAGCTGAAGTTGCTTTGCTGGCGGAAAGCTAG |