Protein ID | Ani_SJS100_1|g11829.t1 |
Gene name | |
Location | scaffold_519:49..2762 |
Strand | - |
Gene length (bp) | 2713 |
Transcript length (bp) | 2529 |
Coding sequence length (bp) | 2529 |
Protein length (aa) | 843 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | 2.2E-32 | 362 | 612 |
PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | 2.2E-27 | 13 | 123 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11829.t1 MHRPFEASSAQEILEEIQKNIQEHTEQNSRTTKLILAGDFNRHHPAWSHRAVHHRFAHHAEELINFFQAHELQWC LTKGDITYWSLNQPGKTSVLDLTLTNDVTRLIRCQLYHDHYGSDHRGTYSEWNLQAEQTRKPKPKRAYDRADWAR APCPYSKRWFTTDLKAQQIEVNQTRRRWQNRCALLGPNHPMTKILFEEMRQKRREWTRAIEKAKGRHWKEFLDKA GEGHLWKAATYMRPRDTYMSIPTLKVGTEEVTDNQGKAEAFLQAFFPMMAEPEPEELVNPAEELPWEPITEQEIY RSLRVAKGTTAPGRDGIPTLVWKHLWTYLKDIITTIFTKSVDLGHHPRQWRQARIIVLRKPGKPDYSAPGAYRPT SLLNTLGKVLEAVMARRLSYWAEKHGLLPDTQYGGRPGRNTEQALLVLANAIDRAWAQSRIVTLIAFDLKGAFNG VHQSSLDVQLRAKGIPSKARQWISSFMEDRQASITFDDFETDDLPLGNAGLAQGSPLSPVLFGFYNSDLVSQSVN SNGGASAFIDDYFRWRISSSAEENIKKIQEDIPRIEEWARQTGASFAAEKTELIHLTRRKKAQRIGQIRMNGQVI QPADTAKLLGVIFDKELRWKEHVQRAVQRASKVNIALSGLRHLRPEQMRQLYQACVIPVLDYASTVWHKPLRDKI HLRLLETVQRTALIRILSAFRTVSTSALEVEAHTLPTHLRLKQRAQIVIARFSTLPEDHPVHDVISRARVRSTQV GNRARFPLAKTLRTMNLTRLQALERIDPRPLAPWRAQSFTDIEIEPDREKAQTNALARAATPNITVFSDASGKEN QLGAAAVALDNNQQILS* |
Coding | >Ani_SJS100_1|g11829.t1 ATGCATAGGCCGTTCGAAGCCAGCAGCGCCCAGGAGATACTGGAGGAAATCCAGAAAAATATCCAAGAACATACA GAGCAGAATAGCCGTACAACAAAACTTATCTTAGCAGGCGACTTTAACCGTCACCACCCTGCATGGAGCCATCGC GCGGTCCATCACCGCTTCGCACATCATGCGGAGGAACTGATCAACTTCTTTCAAGCCCACGAGCTACAGTGGTGC CTGACCAAAGGCGACATAACATACTGGTCTCTTAATCAACCGGGAAAGACATCAGTTCTCGACCTCACGCTTACC AACGATGTAACACGCTTGATCAGATGCCAACTCTACCACGACCACTATGGGTCAGACCACCGAGGAACATATTCG GAATGGAATCTCCAGGCAGAGCAAACTAGAAAGCCCAAACCGAAAAGAGCATATGACCGAGCTGACTGGGCCCGA GCCCCGTGTCCATACTCGAAGCGCTGGTTCACTACGGATCTCAAGGCCCAGCAGATTGAGGTTAACCAGACCCGG CGACGGTGGCAAAACAGATGCGCCCTGCTAGGGCCTAACCACCCAATGACGAAGATACTTTTCGAAGAAATGCGG CAGAAAAGACGAGAGTGGACCAGAGCAATTGAGAAAGCAAAAGGTAGACACTGGAAGGAATTTCTTGACAAAGCC GGCGAAGGCCATCTGTGGAAAGCGGCTACTTACATGCGCCCCCGGGATACCTACATGAGCATCCCCACCCTCAAA GTAGGCACTGAAGAGGTGACAGATAACCAAGGGAAGGCAGAGGCATTCCTGCAAGCCTTCTTCCCCATGATGGCT GAACCCGAGCCAGAGGAACTGGTGAACCCCGCGGAGGAGCTACCATGGGAACCGATTACCGAACAAGAGATCTAC CGGTCGCTCAGAGTGGCCAAGGGGACTACAGCCCCTGGTAGAGATGGGATCCCCACGCTTGTCTGGAAACACTTG TGGACCTACCTTAAAGATATTATCACCACGATCTTCACGAAATCAGTGGACCTGGGCCACCACCCCAGACAATGG AGGCAAGCGCGGATTATCGTGCTGCGGAAACCAGGCAAACCCGATTATTCAGCCCCGGGGGCATACCGACCGACC TCACTGCTCAATACCCTGGGGAAGGTCCTGGAGGCAGTCATGGCCCGCAGACTGTCGTACTGGGCAGAGAAACAT GGACTTCTTCCAGATACACAGTATGGAGGCAGGCCAGGAAGGAATACAGAGCAAGCCCTGCTTGTCCTTGCCAAT GCAATAGACCGAGCATGGGCACAGTCCAGAATAGTCACACTTATTGCGTTCGACCTGAAAGGCGCGTTCAACGGA GTGCATCAGTCTAGCCTGGACGTTCAACTACGGGCCAAAGGCATCCCGTCAAAGGCCCGACAATGGATCAGCAGC TTCATGGAGGACCGACAGGCTAGTATCACATTCGATGACTTTGAAACAGACGACCTTCCTCTAGGAAATGCAGGC CTGGCCCAAGGATCCCCACTCTCGCCGGTCCTCTTTGGATTCTATAATTCAGATCTAGTAAGTCAATCGGTCAAC AGTAATGGTGGAGCATCAGCCTTCATCGATGACTACTTCCGCTGGCGGATCAGCTCGTCAGCGGAAGAGAATATC AAGAAAATCCAAGAAGACATTCCGCGGATTGAAGAATGGGCGCGTCAAACAGGCGCGTCCTTTGCCGCTGAAAAA ACCGAGCTGATTCACTTGACCCGACGCAAAAAGGCACAGAGAATCGGACAGATACGGATGAACGGCCAGGTTATT CAACCAGCCGACACTGCCAAGCTGCTAGGAGTCATCTTTGACAAGGAGCTGCGGTGGAAAGAACACGTACAGAGA GCAGTTCAACGAGCAAGCAAGGTAAACATAGCCCTGAGTGGGCTGCGGCACCTTCGGCCGGAACAGATGCGCCAG CTCTACCAGGCCTGCGTGATACCAGTGCTGGATTACGCATCCACAGTCTGGCATAAACCACTCCGAGACAAGATC CATCTGAGGCTTCTTGAGACAGTTCAACGGACCGCCCTCATCCGAATCCTGTCGGCCTTCCGGACAGTATCCACG TCAGCTCTCGAAGTCGAAGCCCACACGCTGCCTACCCACCTGCGACTCAAGCAACGGGCACAGATAGTGATAGCC CGCTTCAGCACCTTACCGGAAGACCACCCAGTCCATGACGTTATCAGCCGGGCAAGAGTACGCAGCACCCAGGTC GGCAATAGGGCGCGCTTTCCCCTGGCAAAAACCCTACGAACAATGAACCTCACGCGGCTGCAAGCCCTGGAAAGA ATTGATCCCAGACCACTAGCACCTTGGCGAGCCCAATCATTCACCGATATTGAAATTGAGCCGGATCGGGAGAAA GCACAGACCAATGCTCTAGCGAGAGCGGCCACACCCAACATTACAGTCTTTTCGGATGCCTCGGGCAAAGAGAAT CAGCTAGGAGCCGCAGCGGTGGCTCTCGACAACAACCAGCAGATCCTGAGCTAA |
Transcript | >Ani_SJS100_1|g11829.t1 ATGCATAGGCCGTTCGAAGCCAGCAGCGCCCAGGAGATACTGGAGGAAATCCAGAAAAATATCCAAGAACATACA GAGCAGAATAGCCGTACAACAAAACTTATCTTAGCAGGCGACTTTAACCGTCACCACCCTGCATGGAGCCATCGC GCGGTCCATCACCGCTTCGCACATCATGCGGAGGAACTGATCAACTTCTTTCAAGCCCACGAGCTACAGTGGTGC CTGACCAAAGGCGACATAACATACTGGTCTCTTAATCAACCGGGAAAGACATCAGTTCTCGACCTCACGCTTACC AACGATGTAACACGCTTGATCAGATGCCAACTCTACCACGACCACTATGGGTCAGACCACCGAGGAACATATTCG GAATGGAATCTCCAGGCAGAGCAAACTAGAAAGCCCAAACCGAAAAGAGCATATGACCGAGCTGACTGGGCCCGA GCCCCGTGTCCATACTCGAAGCGCTGGTTCACTACGGATCTCAAGGCCCAGCAGATTGAGGTTAACCAGACCCGG CGACGGTGGCAAAACAGATGCGCCCTGCTAGGGCCTAACCACCCAATGACGAAGATACTTTTCGAAGAAATGCGG CAGAAAAGACGAGAGTGGACCAGAGCAATTGAGAAAGCAAAAGGTAGACACTGGAAGGAATTTCTTGACAAAGCC GGCGAAGGCCATCTGTGGAAAGCGGCTACTTACATGCGCCCCCGGGATACCTACATGAGCATCCCCACCCTCAAA GTAGGCACTGAAGAGGTGACAGATAACCAAGGGAAGGCAGAGGCATTCCTGCAAGCCTTCTTCCCCATGATGGCT GAACCCGAGCCAGAGGAACTGGTGAACCCCGCGGAGGAGCTACCATGGGAACCGATTACCGAACAAGAGATCTAC CGGTCGCTCAGAGTGGCCAAGGGGACTACAGCCCCTGGTAGAGATGGGATCCCCACGCTTGTCTGGAAACACTTG TGGACCTACCTTAAAGATATTATCACCACGATCTTCACGAAATCAGTGGACCTGGGCCACCACCCCAGACAATGG AGGCAAGCGCGGATTATCGTGCTGCGGAAACCAGGCAAACCCGATTATTCAGCCCCGGGGGCATACCGACCGACC TCACTGCTCAATACCCTGGGGAAGGTCCTGGAGGCAGTCATGGCCCGCAGACTGTCGTACTGGGCAGAGAAACAT GGACTTCTTCCAGATACACAGTATGGAGGCAGGCCAGGAAGGAATACAGAGCAAGCCCTGCTTGTCCTTGCCAAT GCAATAGACCGAGCATGGGCACAGTCCAGAATAGTCACACTTATTGCGTTCGACCTGAAAGGCGCGTTCAACGGA GTGCATCAGTCTAGCCTGGACGTTCAACTACGGGCCAAAGGCATCCCGTCAAAGGCCCGACAATGGATCAGCAGC TTCATGGAGGACCGACAGGCTAGTATCACATTCGATGACTTTGAAACAGACGACCTTCCTCTAGGAAATGCAGGC CTGGCCCAAGGATCCCCACTCTCGCCGGTCCTCTTTGGATTCTATAATTCAGATCTAGTAAGTCAATCGGTCAAC AGTAATGGTGGAGCATCAGCCTTCATCGATGACTACTTCCGCTGGCGGATCAGCTCGTCAGCGGAAGAGAATATC AAGAAAATCCAAGAAGACATTCCGCGGATTGAAGAATGGGCGCGTCAAACAGGCGCGTCCTTTGCCGCTGAAAAA ACCGAGCTGATTCACTTGACCCGACGCAAAAAGGCACAGAGAATCGGACAGATACGGATGAACGGCCAGGTTATT CAACCAGCCGACACTGCCAAGCTGCTAGGAGTCATCTTTGACAAGGAGCTGCGGTGGAAAGAACACGTACAGAGA GCAGTTCAACGAGCAAGCAAGGTAAACATAGCCCTGAGTGGGCTGCGGCACCTTCGGCCGGAACAGATGCGCCAG CTCTACCAGGCCTGCGTGATACCAGTGCTGGATTACGCATCCACAGTCTGGCATAAACCACTCCGAGACAAGATC CATCTGAGGCTTCTTGAGACAGTTCAACGGACCGCCCTCATCCGAATCCTGTCGGCCTTCCGGACAGTATCCACG TCAGCTCTCGAAGTCGAAGCCCACACGCTGCCTACCCACCTGCGACTCAAGCAACGGGCACAGATAGTGATAGCC CGCTTCAGCACCTTACCGGAAGACCACCCAGTCCATGACGTTATCAGCCGGGCAAGAGTACGCAGCACCCAGGTC GGCAATAGGGCGCGCTTTCCCCTGGCAAAAACCCTACGAACAATGAACCTCACGCGGCTGCAAGCCCTGGAAAGA ATTGATCCCAGACCACTAGCACCTTGGCGAGCCCAATCATTCACCGATATTGAAATTGAGCCGGATCGGGAGAAA GCACAGACCAATGCTCTAGCGAGAGCGGCCACACCCAACATTACAGTCTTTTCGGATGCCTCGGGCAAAGAGAAT CAGCTAGGAGCCGCAGCGGTGGCTCTCGACAACAACCAGCAGATCCTGAGCTAA |
Gene | >Ani_SJS100_1|g11829.t1 ATGCATAGGCCGTTCGAAGCCAGCAGCGCCCAGGAGATACTGGAGGAAATCCAGAAAAATATCCAAGAACATACA GAGCAGAATAGCCGTACAACAAAACTTATCTTAGCAGGCGACTTTAACCGTCACCACCCTGCATGGAGCCATCGC GCGGTCCATCACCGCTTCGCACATCATGCGGAGGAACTGATCAACTTCTTTCAAGCCCACGAGCTACAGTGGTGC CTGACCAAAGGCGACATAACATACTGGTCTCTTAATCAACCGGGAAAGACATCAGTTCTCGACCTCACGCTTACC AACGATGTAACACGCTTGATCAGATGCCAACTCTACCACGACCACTATGGGTCAGACCACCGAGGAACATATTCG GAATGGAATCTCCAGGCAGAGCAAACTAGAAAGCCCAAACCGAAAAGAGCATATGACCGAGCTGACTGGGCCCGA GTAGGTCAAGATATACTAAGACAGATCGACCCACCTGTGAATATTCAGTCGGCCCAGGATCTAGACTACGCGGTC AACAACCTAATCCAGACCACAGTAGTTGCCCTAGACTGACATGTGCCGGTGCAGGCCCCGTGTCCATACTCGAAG CGCTGGTTCACTACGGATCTCAAGGCCCAGCAGATTGAGGTTAACCAGACCCGGCGACGGTGGCAAAACAGATGC GCCCTGCTAGGGCCTAACCACCCAATGACGAAGATACTTTTCGAAGAAATGCGGCAGAAAAGACGAGAGTGGACC AGAGCAATTGAGAAAGCAAAAGGTAGACACTGGAAGGAATTTCTTGACAAAGCCGGCGAAGGCCATCTGTGGAAA GCGGCTACTTACATGCGCCCCCGGGATACCTACATGAGCATCCCCACCCTCAAAGTAGGCACTGAAGAGGTGACA GATAACCAAGGGAAGGCAGAGGCATTCCTGCAAGCCTTCTTCCCCATGATGGCTGAACCCGAGCCAGAGGAACTG GTGAACCCCGCGGAGGAGCTACCATGGGAACCGATTACCGAACAAGAGATCTACCGGTCGCTCAGAGTGGCCAAG GGGACTACAGCCCCTGGTAGAGATGGGATCCCCACGCTTGTCTGGAAACACTTGTGGACCTACCTTAAAGATATT ATCACCACGATCTTCACGAAATCAGTGGACCTGGGCCACCACCCCAGACAATGGAGGCAAGCGCGGATTATCGTG CTGCGGAAACCAGGCAAACCCGATTATTCAGCCCCGGGGGCATACCGACCGACCTCACTGCTCAATACCCTGGGG AAGGTCCTGGAGGCAGTCATGGCCCGCAGACTGTCGTACTGGGCAGAGAAACATGGACTTCTTCCAGATACACAG TATGGAGGCAGGCCAGGAAGGAATACAGAGCAAGCCCTGCTTGTCCTTGCCAATGCAATAGACCGAGCATGGGCA CAGTCCAGAATAGTCACACTTATTGCGTTCGACCTGAAAGGCGCGTTCAACGGAGTGCATCAGTCTAGCCTGGAC GTTCAACTACGGGCCAAAGGCATCCCGTCAAAGGCCCGACAATGGATCAGCAGCTTCATGGAGGACCGACAGGCT AGTATCACATTCGATGACTTTGAAACAGACGACCTTCCTCTAGGAAATGCAGGCCTGGCCCAAGGATCCCCACTC TCGCCGGTCCTCTTTGGATTCTATAATTCAGATCTAGTAAGTCAATCGGTCAACAGTAATGGTGGAGCATCAGCC TTCATCGATGACTACTTCCGCTGGCGGATCAGCTCGTCAGCGGAAGAGAATATCAAGAAAATCCAAGAAGACATT CCGCGGATTGAAGAATGGGCGCGTCAAACAGGCGCGTCCTTTGCCGCTGAAAAAACCGAGCTGATTCACTTGACC CGACGCAAAAAGGCACAGAGAATCGGACAGATACGGATGAACGGCCAGGTTATTCAACCAGCCGACACTGCCAAG CTGCTAGGAGTCATCTTTGACAAGGAGCTGCGGTGGAAAGAACACGTACAGAGAGCAGTTCAACGAGCAAGCAAG GTAAACATAGCCCTGAGTGGGCTGCGGCACCTTCGGCCGGAACAGATGCGCCAGCTCTACCAGGCCTGCGTGATA CCAGTGCTGGATTACGCATCCACAGTCTGGCATAAACCACTCCGAGACAAGATCCATCTGAGGCTTCTTGAGACA GTTCAACGGACCGCCCTCATCCGAATCCTGTCGGCCTTCCGGACAGTATCCACGTCAGCTCTCGAAGTCGAAGCC CACACGCTGCCTACCCACCTGCGACTCAAGCAACGGGCACAGATAGTGATAGCCCGCTTCAGCACCTTACCGGAA GACCACCCAGTCCATGACGTTATCAGCCGGGCAAGAGTACGCAGCACCCAGGTCGGCAATAGGGCGCGCTTTCCC CTGGCAAAAACCCTACGAACAATGAACCTCACGCGGCTGCAAGCCCTGGAAAGAATTGATCCCAGACCACTAGCA CCTTGGCGAGCCCAATCATTCACCGATATTGAAATTGAGCCGGATCGGGAGAAAGCACAGACCAATGCTCTAGCG AGAGCGGCCACACCCAACATTACAGTCTTTTCGGATGCCTCGGGCAAAGAGAATCAGCTAGGAGCCGCAGCGGTG GCTCTCGACAACAACCAGCAGATCGTAGGGTCTCGACAAGTCAGCATTGGTTCGATGGAGTTCTGGTCCGTCTAC GCAGCTGAGCTAA |