Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11808.t1
Gene name
Locationscaffold_485:2808..3386
Strand+
Gene length (bp)578
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 67 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 49 71 22
3 76 98 22
4 105 127 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11808.t1
MESDDMIPDAGQRPTDPDILVVEAWGQGFLVGSLIVMIAITAANMKIGVLLHRLIVAELALVLGHGTFIFLHAPA
YGWFLSVTAVGLTISHSLHNVIAWMKIRGFFPPWGTRLYLITLLAAQPYWVVEIYANFAFFNQGQALYTTTRPLE
PLFRCGVRVRSSPRFALLMRI*
Coding >Ani_SJS100_1|g11808.t1
ATGGAGAGCGATGATATGATTCCAGATGCTGGCCAGCGTCCTACTGACCCGGACATCCTTGTCGTGGAGGCGTGG
GGACAAGGATTTCTGGTGGGCTCCCTTATTGTCATGATTGCCATCACCGCAGCCAACATGAAAATTGGGGTGCTC
CTGCACAGACTGATCGTGGCAGAGCTCGCCCTGGTCCTCGGGCACGGAACATTCATCTTTCTCCATGCGCCTGCA
TATGGCTGGTTTCTCTCGGTCACGGCCGTGGGGCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATG
AAGATTCGCGGCTTTTTCCCACCCTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGG
GTCGTCGAAATTTATGCCAACTTTGCCTTTTTCAATCAGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAG
CCGCTCTTCCGGTGCGGTGTCCGAGTGCGATCCTCCCCACGCTTCGCATTGCTGATGCGAATCTAG
Transcript >Ani_SJS100_1|g11808.t1
ATGGAGAGCGATGATATGATTCCAGATGCTGGCCAGCGTCCTACTGACCCGGACATCCTTGTCGTGGAGGCGTGG
GGACAAGGATTTCTGGTGGGCTCCCTTATTGTCATGATTGCCATCACCGCAGCCAACATGAAAATTGGGGTGCTC
CTGCACAGACTGATCGTGGCAGAGCTCGCCCTGGTCCTCGGGCACGGAACATTCATCTTTCTCCATGCGCCTGCA
TATGGCTGGTTTCTCTCGGTCACGGCCGTGGGGCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATG
AAGATTCGCGGCTTTTTCCCACCCTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGG
GTCGTCGAAATTTATGCCAACTTTGCCTTTTTCAATCAGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAG
CCGCTCTTCCGGTGCGGTGTCCGAGTGCGATCCTCCCCACGCTTCGCATTGCTGATGCGAATCTAG
Gene >Ani_SJS100_1|g11808.t1
ATGGAGAGCGATGATATGATTCCAGATGCTGGCCAGCGTCCTACTGACCCGGACATCCTTGTCGTGGAGGCGTGG
GGACAAGGATTTCTGGTGGGCTCCCTTATTGTCATGATTGCCATCACCGCAGCCAACATGAAAATTGGGGTGCTC
CTGCACAGACTGATCGTGGCAGAGGTAAGTTGTGCTGCCTCGTTGCGGCGAATGGGGCACTATCCCGTGCAAATG
CGGACGCTTAGCTCGCCCTGGTCCTCGGGCACGGAACATTCATCTTTCTCCATGCGCCTGCATATGGCTGGTTTC
TCTCGGTCACGGCCGTGGGGCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATTCGCGGCT
TTTTCCCACCCTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAAATTT
ATGCCAACTTTGCCTTTTTCAATCAGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAGCCGCTCTTCCGGT
GCGGTGTCCGAGTGCGATCCTCCCCACGCTTCGCATTGCTGATGCGAATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail