© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11799.t1 |
| Gene name | |
| Location | scaffold_470:115..1089 |
| Strand | + |
| Gene length (bp) | 974 |
| Transcript length (bp) | 834 |
| Coding sequence length (bp) | 834 |
| Protein length (aa) | 278 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 63 | 85 | 22 |
| 3 | 141 | 163 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11799.t1 MIDWVNHGVGQHIYLYGIQGLHHFLLNLFIVEILYTLSICFTKYSILMFYWRIFGMSNIRYPIYLIAFVVTGWGL GVILTTIFQCLPVHGFWDKTIPSHCGVNVNNFFIGNAVPNILTDWALLTLPLPYVWKLQRSASQKLALTGVFIMG GFICIISIVRLIIMLNAYKVPSLDETWVFVGPSKWTAVETNIGIVSACLPSLRPVITLIKKTGSSTKGVSQDGSL QESYKCYSTLHSSGQRGKRGKRLGEDETALTLTAISVQTTLDVESSYSAVAR* |
| Coding | >Ani_SJS100_1|g11799.t1 ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT GGATTCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAA ACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGCATGTCTACCC TCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTG CAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAG GATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTC GCTCGGTAG |
| Transcript | >Ani_SJS100_1|g11799.t1 ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT GGATTCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAA ACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGCATGTCTACCC TCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTG CAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAG GATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTC GCTCGGTAG |
| Gene | >Ani_SJS100_1|g11799.t1 ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT GGATTGTACGTTCATTGTTATTCCTATTACCCTTTCCACCCCCAATAGTTGCAGTCACGTCGAACTAACCGGATC GGGCACACCAGCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTG GACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGGTGTG TTGCTGATTCAACCGTACGCCATGCATTGTCTACGGACTAATAAAATCAAATAGCATGTCTACCCTCGCTCCGAC CGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTT ACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGATGAGACAG CCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAG |