Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11799.t1
Gene name
Locationscaffold_470:115..1089
Strand+
Gene length (bp)974
Transcript length (bp)834
Coding sequence length (bp)834
Protein length (aa) 278

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 63 85 22
3 141 163 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11799.t1
MIDWVNHGVGQHIYLYGIQGLHHFLLNLFIVEILYTLSICFTKYSILMFYWRIFGMSNIRYPIYLIAFVVTGWGL
GVILTTIFQCLPVHGFWDKTIPSHCGVNVNNFFIGNAVPNILTDWALLTLPLPYVWKLQRSASQKLALTGVFIMG
GFICIISIVRLIIMLNAYKVPSLDETWVFVGPSKWTAVETNIGIVSACLPSLRPVITLIKKTGSSTKGVSQDGSL
QESYKCYSTLHSSGQRGKRGKRLGEDETALTLTAISVQTTLDVESSYSAVAR*
Coding >Ani_SJS100_1|g11799.t1
ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC
TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC
TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA
GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC
GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC
CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT
GGATTCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAA
ACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGCATGTCTACCC
TCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTG
CAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAG
GATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTC
GCTCGGTAG
Transcript >Ani_SJS100_1|g11799.t1
ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC
TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC
TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA
GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC
GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC
CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT
GGATTCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTGGACGAA
ACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGCATGTCTACCC
TCGCTCCGACCGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTG
CAGGAAAGTTACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAG
GATGAGACAGCCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTC
GCTCGGTAG
Gene >Ani_SJS100_1|g11799.t1
ATGATCGACTGGGTCAATCACGGCGTAGGGCAGCACATCTACTTATATGGAATCCAGGGTCTCCATCACTTCCTC
TTGAACCTCTTCATCGTCGAGATTTTGTACACGCTGTCGATCTGTTTCACCAAATATTCAATCCTGATGTTCTAC
TGGCGCATCTTCGGCATGAGCAACATCCGGTACCCAATTTACCTCATTGCTTTTGTCGTGACGGGATGGGGCTTA
GGGGTTATTTTAACAACCATCTTCCAGTGCCTTCCGGTGCATGGATTCTGGGACAAGACCATCCCCTCGCACTGC
GGCGTGAATGTCAACAACTTTTTCATCGGCAATGCCGTCCCCAATATCCTCACCGACTGGGCGCTCCTGACCCTC
CCGCTGCCTTATGTTTGGAAGCTGCAGCGCAGTGCCTCGCAGAAGTTAGCTCTGACTGGGGTGTTTATTATGGGT
GGATTGTACGTTCATTGTTATTCCTATTACCCTTTCCACCCCCAATAGTTGCAGTCACGTCGAACTAACCGGATC
GGGCACACCAGCATTTGCATCATCTCAATTGTGCGTCTCATCATCATGCTCAATGCATACAAGGTACCCTCGCTG
GACGAAACGTGGGTCTTTGTCGGTCCTTCCAAATGGACGGCGGTGGAGACAAATATCGGGATCGTGTCTGGTGTG
TTGCTGATTCAACCGTACGCCATGCATTGTCTACGGACTAATAAAATCAAATAGCATGTCTACCCTCGCTCCGAC
CGGTTATCACACTCATAAAGAAGACTGGCTCCAGCACGAAGGGCGTTTCCCAAGACGGGAGTTTGCAGGAAAGTT
ACAAATGTTACAGTACTCTGCATTCGAGCGGCCAGCGCGGCAAGCGCGGCAAACGACTTGGAGAGGATGAGACAG
CCCTGACGCTCACGGCTATCTCAGTGCAGACCACGCTTGACGTGGAATCATCGTATTCTGCGGTCGCTCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail