Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11781.t1
Gene name
Locationscaffold_439:3121..4096
Strand+
Gene length (bp)975
Transcript length (bp)975
Coding sequence length (bp)975
Protein length (aa) 325

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00505 HMG_box HMG (high mobility group) box 3.2E-09 87 155

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 58 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
HMG

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11781.t1
MDKTEADQTKPEPLCQNSRVRRSNRAVAMTRNGQAEHATLKLKLDLPCPLSELANGTPHIPVRDMCAWVDRPVES
RHQEALQRHGRIPRPMNSFMLYRLAYSDRAKYWLAHDDHQAISILTGRSWKMEPPHIRKQHKTLAVMEKQKHAEA
HPEYRFSPSNKKKRSRTARPSSQEFVLRSEAFPKVSRSSQPHAWSTSLNNDRVSGPSAEPFLAEEETLLKSIPSN
PDSFGPLQSATSVWWQGTTYSQMASAEQDSTGTQPCFPVVTGQPGIPDSACFVPQSGSPGLEAVNGQSALLPLSV
SNETCKVDEELLMEGTQRVATVGQ*
Coding >Ani_SJS100_1|g11781.t1
ATGGATAAGACCGAGGCGGACCAGACAAAGCCAGAGCCTTTGTGTCAGAACAGCAGAGTCCGACGGTCGAATCGC
GCCGTAGCCATGACAAGGAACGGCCAAGCCGAGCACGCAACGTTGAAGCTCAAGCTAGACTTACCATGCCCACTC
AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGATCGCCCGGTCGAGTCA
CGCCACCAGGAGGCTCTACAACGGCATGGCAGGATTCCACGTCCGATGAATTCATTCATGCTGTACCGGCTGGCG
TACAGTGATCGAGCGAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG
AAGATGGAACCCCCCCACATCCGTAAGCAGCACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG
CACCCGGAATATCGGTTCTCGCCGTCAAACAAGAAGAAACGATCGCGGACTGCAAGACCCAGTTCTCAGGAATTC
GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTACTTCGTTGAACAAT
GACCGCGTCAGTGGACCCTCCGCAGAACCATTCCTTGCAGAAGAGGAAACTCTCCTCAAAAGTATTCCATCGAAC
CCAGATAGTTTTGGACCATTGCAAAGTGCTACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT
GCTGAGCAAGACTCCACGGGCACTCAGCCTTGTTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT
TGCTTCGTTCCCCAATCTGGATCCCCTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT
TCGAATGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCGACTGTAGGCCAGTAA
Transcript >Ani_SJS100_1|g11781.t1
ATGGATAAGACCGAGGCGGACCAGACAAAGCCAGAGCCTTTGTGTCAGAACAGCAGAGTCCGACGGTCGAATCGC
GCCGTAGCCATGACAAGGAACGGCCAAGCCGAGCACGCAACGTTGAAGCTCAAGCTAGACTTACCATGCCCACTC
AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGATCGCCCGGTCGAGTCA
CGCCACCAGGAGGCTCTACAACGGCATGGCAGGATTCCACGTCCGATGAATTCATTCATGCTGTACCGGCTGGCG
TACAGTGATCGAGCGAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG
AAGATGGAACCCCCCCACATCCGTAAGCAGCACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG
CACCCGGAATATCGGTTCTCGCCGTCAAACAAGAAGAAACGATCGCGGACTGCAAGACCCAGTTCTCAGGAATTC
GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTACTTCGTTGAACAAT
GACCGCGTCAGTGGACCCTCCGCAGAACCATTCCTTGCAGAAGAGGAAACTCTCCTCAAAAGTATTCCATCGAAC
CCAGATAGTTTTGGACCATTGCAAAGTGCTACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT
GCTGAGCAAGACTCCACGGGCACTCAGCCTTGTTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT
TGCTTCGTTCCCCAATCTGGATCCCCTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT
TCGAATGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCGACTGTAGGCCAGTAA
Gene >Ani_SJS100_1|g11781.t1
ATGGATAAGACCGAGGCGGACCAGACAAAGCCAGAGCCTTTGTGTCAGAACAGCAGAGTCCGACGGTCGAATCGC
GCCGTAGCCATGACAAGGAACGGCCAAGCCGAGCACGCAACGTTGAAGCTCAAGCTAGACTTACCATGCCCACTC
AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGATCGCCCGGTCGAGTCA
CGCCACCAGGAGGCTCTACAACGGCATGGCAGGATTCCACGTCCGATGAATTCATTCATGCTGTACCGGCTGGCG
TACAGTGATCGAGCGAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG
AAGATGGAACCCCCCCACATCCGTAAGCAGCACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG
CACCCGGAATATCGGTTCTCGCCGTCAAACAAGAAGAAACGATCGCGGACTGCAAGACCCAGTTCTCAGGAATTC
GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTACTTCGTTGAACAAT
GACCGCGTCAGTGGACCCTCCGCAGAACCATTCCTTGCAGAAGAGGAAACTCTCCTCAAAAGTATTCCATCGAAC
CCAGATAGTTTTGGACCATTGCAAAGTGCTACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT
GCTGAGCAAGACTCCACGGGCACTCAGCCTTGTTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT
TGCTTCGTTCCCCAATCTGGATCCCCTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT
TCGAATGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCGACTGTAGGCCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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