© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g11777.t1 |
| Gene name | |
| Location | scaffold_434:2177..3167 |
| Strand | - |
| Gene length (bp) | 990 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 71 | 93 | 22 |
| 4 | 106 | 128 | 22 |
| 5 | 182 | 199 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11777.t1 MPSAGQRPIDPGILVVEAWGQGFLVGSLIIMIAITAANMKKGVPLHRLIVAELALALGHGTFIFLHAPAQGWYLS ATAIGLTISHTLHNVIAWMKIRGYFTPWGTRLYLITLLAAQPYWVVEIYANFAFFNRGQALYTTTRPLEPLFQCG GPLVDLHHLLSPVHHPAGLWVFAGAVDSHQPTFGIMLLFMVISVVFAVVDMCAIRVENRLGYPPGMEPFWKLAFV FKRLSDTIILDDFRSALDRLRYHYHPDDVPPQEATHARGRSANRLARLYK* |
| Coding | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCG GCCACGGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTC ACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCC AACTTTGCCTTTTTCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGT GGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCA GTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGAC ATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTAGCGTTTGTT TTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTACCAC CCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCCAGGTTGTATAAG TAG |
| Transcript | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCG GCCACGGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTC ACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCC AACTTTGCCTTTTTCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGT GGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCA GTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGAC ATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTAGCGTTTGTT TTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTACCAC CCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCCAGGTTGTATAAG TAG |
| Gene | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGGTAAGTTGTGCTGCCTGGTTGCGGCGAATGGGGCACTATCCCCTGCTGATGTGGACGCTTAGCTCGCCC TGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCACGGCCATCG GCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTCACCCCTTGGGGCA CGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCCAACTTTGCCTTTT TCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGTGTCCGAGTGCGAT CCTCCCCACGCTTCGCATTGCTGATGCGAATCTAGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTAC ACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCAGTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGT TCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCC CGGGGATGGAGCCGTTCTGGAAGGTGAGCGGCCGCCACTGACGAGGAGAAGATCAGCATGCTGACCCTGCTGTAG TTAGCGTTTGTTTTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGC TATCACTACCACCCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCC AGGTTGTATAAGTAG |