Protein ID | Ani_SJS100_1|g11777.t1 |
Gene name | |
Location | scaffold_434:2177..3167 |
Strand | - |
Gene length (bp) | 990 |
Transcript length (bp) | 828 |
Coding sequence length (bp) | 828 |
Protein length (aa) | 276 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 44 | 66 | 22 |
3 | 71 | 93 | 22 |
4 | 106 | 128 | 22 |
5 | 182 | 199 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11777.t1 MPSAGQRPIDPGILVVEAWGQGFLVGSLIIMIAITAANMKKGVPLHRLIVAELALALGHGTFIFLHAPAQGWYLS ATAIGLTISHTLHNVIAWMKIRGYFTPWGTRLYLITLLAAQPYWVVEIYANFAFFNRGQALYTTTRPLEPLFQCG GPLVDLHHLLSPVHHPAGLWVFAGAVDSHQPTFGIMLLFMVISVVFAVVDMCAIRVENRLGYPPGMEPFWKLAFV FKRLSDTIILDDFRSALDRLRYHYHPDDVPPQEATHARGRSANRLARLYK* |
Coding | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCG GCCACGGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTC ACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCC AACTTTGCCTTTTTCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGT GGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCA GTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGAC ATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTAGCGTTTGTT TTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTACCAC CCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCCAGGTTGTATAAG TAG |
Transcript | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCG GCCACGGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTC ACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCC AACTTTGCCTTTTTCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGT GGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCA GTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGAC ATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTAGCGTTTGTT TTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTACCAC CCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCCAGGTTGTATAAG TAG |
Gene | >Ani_SJS100_1|g11777.t1 ATGCCAAGTGCTGGCCAGCGTCCTATAGACCCGGGCATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG GGCTCCCTTATTATTATGATTGCCATCACCGCGGCCAACATGAAGAAAGGGGTGCCCCTGCACAGACTGATCGTG GCAGAGGTAAGTTGTGCTGCCTGGTTGCGGCGAATGGGGCACTATCCCCTGCTGATGTGGACGCTTAGCTCGCCC TGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCACGGCCATCG GCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATACTTCACCCCTTGGGGCA CGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATTTATGCCAACTTTGCCTTTT TCAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTCTTCCAGTGCGGTGTCCGAGTGCGAT CCTCCCCACGCTTCGCATTGCTGATGCGAATCTAGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTAC ACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCAGTTGATTCGCATCAGCCCACGTTCGGCATCATGCTCCTGT TCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCC CGGGGATGGAGCCGTTCTGGAAGGTGAGCGGCCGCCACTGACGAGGAGAAGATCAGCATGCTGACCCTGCTGTAG TTAGCGTTTGTTTTTAAACGCCTGAGCGACACTATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGC TATCACTACCACCCGGACGATGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGCGCAAACCGGCTTGCC AGGTTGTATAAGTAG |