Protein ID | Ani_SJS100_1|g11753.t1 |
Gene name | |
Location | scaffold_407:9..3109 |
Strand | - |
Gene length (bp) | 3100 |
Transcript length (bp) | 2997 |
Coding sequence length (bp) | 2997 |
Protein length (aa) | 999 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | 4.5E-33 | 520 | 771 |
PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | 1.2E-28 | 104 | 237 |
PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | 6.6E-06 | 125 | 234 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11753.t1 MTANLRILQLNIMKSRAGMEALINDHQSQNLDLLLIQEPPKTAYHTHVNHSAWRLYRPTYPEIPRFRSLLYVNRR ISTSSHRQIQCGHPDVVAVKIWTPELQYLVFSIYIQPIALHDSIEASSAREILAEIQQTIQEQTEQGERTTKIIL AGDFNRHHPAWSHRAVHRGFAEHADELINFFQDHELQWCLAPGETTFWSLNKPGTTSVLDLTLTNDMTRLIKCQL YHDHYGSDHRGTYSEWSLQPEQTRKPKPRRAYDRADWARVGQTIMRSINPQLRIQSERDLDQAVNHLIQTTITAL DQHVPVRAPCPYSKRWFTADLKIQQVEVNQTRRRWQDSCATLGPNHPTTKGMFAEMRERRRKWTRAIEKAKTSHW REFLDKAGEGHLWKAATYMRPRDAYTSIPAIKVGTEEVTDNQRKAETFLDSFFPKMAEPEVEVESNPTEEELPWE PITEQEIYRSLRAAKGTTAPGRDGIPTLVWKHLWMYLKETITTVFTKSVDLGYYPRQWKQARIVVLRKPGKPDYS APGAYRPISLLNTLGKLLEAVMARRLSYWAERFKLLPDTQFGGRPGRNTEQALLVLANAVYRAWERSRVVTLIAF DLKGAFNGVHQTSLDARLRAKGIPPKARQWIRSFMEDRQASVTFDDFESENLPLEHAGLAQGSPLSPILFGFYNS DLVDQVVDQNGGASAFIDDYFRWRSYPTVEENIKKIQEEDIPRIEEWARRTGASFAAEKTELIHLTRRKATHGKG QIVIDGQATKPADTAKLLGVIFDKEMRWKEHVQEAVKRATKVNIALSGLRHLRPEQMRQLYQACVTPILDYASTV WHNPLRDKIHLRLLETVQRTALIRILSAFRTVSTAALEVESYILPTHLRLKQRGQIVAARFSTLPDDHPVHQVIR RAKERSTYIGSGARFPLAETLRTMNLGRLQALETIDPKPLAPWRSQPFTEIKIEPDREKAQSNALAQQSTTASAQ WNTGRSMRPSSWQSTMLLGWFST* |
Coding | >Ani_SJS100_1|g11753.t1 ATGACAGCAAACCTTCGCATCTTACAGTTGAACATCATGAAATCGAGGGCAGGGATGGAAGCCCTCATCAACGAT CATCAAAGCCAGAACCTGGACCTGCTCCTGATTCAGGAACCGCCAAAGACAGCATACCACACCCATGTTAACCAT AGTGCTTGGCGACTCTACCGACCGACATACCCAGAAATACCGCGGTTTCGCAGCCTCCTCTATGTCAACCGGAGG ATCTCTACATCATCACACCGCCAAATCCAGTGTGGTCACCCAGATGTGGTGGCCGTTAAGATCTGGACCCCAGAG CTCCAGTACCTGGTGTTCTCGATCTATATCCAGCCAATCGCGTTGCATGACTCAATTGAAGCGAGCAGCGCACGC GAAATTTTGGCAGAAATCCAGCAAACCATCCAGGAACAAACAGAGCAGGGCGAACGCACGACGAAAATTATTCTG GCCGGAGACTTCAACCGCCACCACCCGGCATGGAGCCACCGTGCGGTACATCGCGGCTTCGCAGAACACGCAGAC GAACTAATAAATTTCTTTCAAGACCACGAGCTGCAATGGTGCCTGGCCCCAGGCGAGACGACATTCTGGTCCCTG AACAAACCTGGGACGACTTCAGTACTCGATCTCACACTTACTAACGACATGACGCGGCTGATCAAATGCCAACTT TATCATGACCACTACGGGTCCGACCACAGGGGCACGTACTCAGAGTGGAGCCTCCAACCAGAGCAAACTAGGAAG CCCAAACCGAGAAGAGCGTACGACCGAGCAGACTGGGCCCGAGTAGGCCAAACGATAATGAGGTCGATTAACCCA CAGTTGAGAATTCAATCCGAGCGGGACCTAGATCAGGCGGTCAACCATCTGATTCAAACTACAATAACTGCGCTC GACCAGCATGTGCCAGTACGGGCCCCATGCCCATACTCAAAGCGCTGGTTCACAGCAGATCTCAAGATCCAACAG GTGGAAGTCAACCAAACCCGCCGGAGGTGGCAAGACAGTTGTGCCACCCTTGGACCCAACCACCCAACGACAAAG GGAATGTTTGCAGAAATGCGCGAAAGAAGACGAAAATGGACAAGAGCAATTGAAAAAGCAAAAACGAGCCACTGG AGGGAGTTTCTTGACAAAGCAGGCGAAGGCCATCTATGGAAAGCAGCCACCTATATGCGCCCACGAGATGCTTAT ACGAGCATTCCAGCGATCAAAGTGGGCACGGAGGAGGTAACTGACAACCAAAGAAAAGCAGAGACGTTCCTTGAT TCCTTCTTTCCAAAAATGGCAGAACCCGAAGTGGAAGTAGAAAGCAACCCCACAGAAGAAGAACTGCCATGGGAG CCGATCACTGAACAGGAGATTTACCGATCACTCCGAGCCGCCAAGGGAACTACGGCCCCAGGTAGAGATGGAATT CCCACGCTTGTATGGAAACATCTGTGGATGTACCTGAAAGAAACGATTACCACTGTCTTCACCAAGTCAGTGGAT CTGGGCTACTACCCCAGACAATGGAAACAGGCGCGGATCGTAGTGCTGCGGAAGCCAGGAAAGCCAGACTATTCG GCGCCGGGAGCATACCGACCGATATCACTACTGAACACGCTGGGGAAGCTACTAGAAGCCGTTATGGCCCGACGA CTCTCCTACTGGGCGGAGAGATTTAAGCTACTCCCGGACACACAATTTGGAGGTAGACCAGGACGAAACACCGAG CAAGCTCTGCTGGTACTCGCCAACGCAGTATACCGAGCTTGGGAACGGTCTAGGGTGGTAACGCTGATCGCGTTC GACCTAAAAGGCGCGTTCAATGGAGTCCACCAAACCAGCCTCGACGCTCGGCTGCGAGCTAAAGGCATCCCACCA AAGGCCCGGCAATGGATCCGCAGCTTCATGGAAGACCGCCAAGCGAGCGTCACATTTGATGACTTTGAGAGTGAA AATCTACCACTGGAGCATGCCGGCCTGGCACAAGGATCCCCACTCTCACCGATTCTGTTTGGATTCTACAACTCG GACCTGGTGGACCAAGTGGTAGACCAAAATGGCGGTGCATCAGCTTTTATCGACGACTATTTCCGCTGGCGATCC TACCCAACAGTAGAAGAGAACATCAAGAAGATCCAGGAAGAAGACATCCCCCGAATTGAAGAGTGGGCGCGGCGA ACGGGTGCATCCTTTGCCGCCGAAAAGACTGAATTAATTCATCTTACCAGGCGGAAAGCGACCCACGGAAAAGGA CAAATTGTCATCGACGGCCAGGCTACCAAACCGGCCGACACTGCGAAACTTCTTGGAGTGATCTTTGACAAAGAG ATGCGCTGGAAGGAACATGTCCAGGAAGCGGTTAAACGGGCAACCAAAGTGAACATAGCCCTGAGCGGGCTCAGA CACCTCCGACCGGAGCAAATGCGCCAGCTATACCAAGCATGCGTAACACCAATTCTAGACTACGCATCCACAGTA TGGCACAATCCGCTCCGAGACAAGATACATCTGCGACTTCTGGAGACGGTACAGAGAACGGCTCTTATCCGAATC CTTTCAGCCTTCCGGACAGTATCTACTGCTGCACTCGAAGTTGAGTCCTATATCCTACCAACCCACTTGCGACTC AAGCAGCGGGGACAAATAGTGGCTGCTCGCTTCAGCACCCTGCCAGATGACCACCCGGTTCACCAGGTAATACGC CGAGCAAAGGAACGCAGCACCTATATCGGTAGCGGGGCCCGCTTTCCCCTAGCCGAAACACTGCGAACCATGAAC CTCGGGCGGCTGCAGGCCTTAGAAACAATCGACCCCAAACCACTTGCGCCATGGCGGAGCCAGCCCTTTACAGAA ATCAAGATAGAGCCTGATCGAGAGAAAGCGCAGTCCAACGCACTGGCACAGCAATCCACAACAGCATCGGCTCAA TGGAACACTGGTCGGTCTATGCGGCCGAGCTCATGGCAATCTACTATGCTATTGGGCTGGTTTTCCACCTAG |
Transcript | >Ani_SJS100_1|g11753.t1 ATGACAGCAAACCTTCGCATCTTACAGTTGAACATCATGAAATCGAGGGCAGGGATGGAAGCCCTCATCAACGAT CATCAAAGCCAGAACCTGGACCTGCTCCTGATTCAGGAACCGCCAAAGACAGCATACCACACCCATGTTAACCAT AGTGCTTGGCGACTCTACCGACCGACATACCCAGAAATACCGCGGTTTCGCAGCCTCCTCTATGTCAACCGGAGG ATCTCTACATCATCACACCGCCAAATCCAGTGTGGTCACCCAGATGTGGTGGCCGTTAAGATCTGGACCCCAGAG CTCCAGTACCTGGTGTTCTCGATCTATATCCAGCCAATCGCGTTGCATGACTCAATTGAAGCGAGCAGCGCACGC GAAATTTTGGCAGAAATCCAGCAAACCATCCAGGAACAAACAGAGCAGGGCGAACGCACGACGAAAATTATTCTG GCCGGAGACTTCAACCGCCACCACCCGGCATGGAGCCACCGTGCGGTACATCGCGGCTTCGCAGAACACGCAGAC GAACTAATAAATTTCTTTCAAGACCACGAGCTGCAATGGTGCCTGGCCCCAGGCGAGACGACATTCTGGTCCCTG AACAAACCTGGGACGACTTCAGTACTCGATCTCACACTTACTAACGACATGACGCGGCTGATCAAATGCCAACTT TATCATGACCACTACGGGTCCGACCACAGGGGCACGTACTCAGAGTGGAGCCTCCAACCAGAGCAAACTAGGAAG CCCAAACCGAGAAGAGCGTACGACCGAGCAGACTGGGCCCGAGTAGGCCAAACGATAATGAGGTCGATTAACCCA CAGTTGAGAATTCAATCCGAGCGGGACCTAGATCAGGCGGTCAACCATCTGATTCAAACTACAATAACTGCGCTC GACCAGCATGTGCCAGTACGGGCCCCATGCCCATACTCAAAGCGCTGGTTCACAGCAGATCTCAAGATCCAACAG GTGGAAGTCAACCAAACCCGCCGGAGGTGGCAAGACAGTTGTGCCACCCTTGGACCCAACCACCCAACGACAAAG GGAATGTTTGCAGAAATGCGCGAAAGAAGACGAAAATGGACAAGAGCAATTGAAAAAGCAAAAACGAGCCACTGG AGGGAGTTTCTTGACAAAGCAGGCGAAGGCCATCTATGGAAAGCAGCCACCTATATGCGCCCACGAGATGCTTAT ACGAGCATTCCAGCGATCAAAGTGGGCACGGAGGAGGTAACTGACAACCAAAGAAAAGCAGAGACGTTCCTTGAT TCCTTCTTTCCAAAAATGGCAGAACCCGAAGTGGAAGTAGAAAGCAACCCCACAGAAGAAGAACTGCCATGGGAG CCGATCACTGAACAGGAGATTTACCGATCACTCCGAGCCGCCAAGGGAACTACGGCCCCAGGTAGAGATGGAATT CCCACGCTTGTATGGAAACATCTGTGGATGTACCTGAAAGAAACGATTACCACTGTCTTCACCAAGTCAGTGGAT CTGGGCTACTACCCCAGACAATGGAAACAGGCGCGGATCGTAGTGCTGCGGAAGCCAGGAAAGCCAGACTATTCG GCGCCGGGAGCATACCGACCGATATCACTACTGAACACGCTGGGGAAGCTACTAGAAGCCGTTATGGCCCGACGA CTCTCCTACTGGGCGGAGAGATTTAAGCTACTCCCGGACACACAATTTGGAGGTAGACCAGGACGAAACACCGAG CAAGCTCTGCTGGTACTCGCCAACGCAGTATACCGAGCTTGGGAACGGTCTAGGGTGGTAACGCTGATCGCGTTC GACCTAAAAGGCGCGTTCAATGGAGTCCACCAAACCAGCCTCGACGCTCGGCTGCGAGCTAAAGGCATCCCACCA AAGGCCCGGCAATGGATCCGCAGCTTCATGGAAGACCGCCAAGCGAGCGTCACATTTGATGACTTTGAGAGTGAA AATCTACCACTGGAGCATGCCGGCCTGGCACAAGGATCCCCACTCTCACCGATTCTGTTTGGATTCTACAACTCG GACCTGGTGGACCAAGTGGTAGACCAAAATGGCGGTGCATCAGCTTTTATCGACGACTATTTCCGCTGGCGATCC TACCCAACAGTAGAAGAGAACATCAAGAAGATCCAGGAAGAAGACATCCCCCGAATTGAAGAGTGGGCGCGGCGA ACGGGTGCATCCTTTGCCGCCGAAAAGACTGAATTAATTCATCTTACCAGGCGGAAAGCGACCCACGGAAAAGGA CAAATTGTCATCGACGGCCAGGCTACCAAACCGGCCGACACTGCGAAACTTCTTGGAGTGATCTTTGACAAAGAG ATGCGCTGGAAGGAACATGTCCAGGAAGCGGTTAAACGGGCAACCAAAGTGAACATAGCCCTGAGCGGGCTCAGA CACCTCCGACCGGAGCAAATGCGCCAGCTATACCAAGCATGCGTAACACCAATTCTAGACTACGCATCCACAGTA TGGCACAATCCGCTCCGAGACAAGATACATCTGCGACTTCTGGAGACGGTACAGAGAACGGCTCTTATCCGAATC CTTTCAGCCTTCCGGACAGTATCTACTGCTGCACTCGAAGTTGAGTCCTATATCCTACCAACCCACTTGCGACTC AAGCAGCGGGGACAAATAGTGGCTGCTCGCTTCAGCACCCTGCCAGATGACCACCCGGTTCACCAGGTAATACGC CGAGCAAAGGAACGCAGCACCTATATCGGTAGCGGGGCCCGCTTTCCCCTAGCCGAAACACTGCGAACCATGAAC CTCGGGCGGCTGCAGGCCTTAGAAACAATCGACCCCAAACCACTTGCGCCATGGCGGAGCCAGCCCTTTACAGAA ATCAAGATAGAGCCTGATCGAGAGAAAGCGCAGTCCAACGCACTGGCACAGCAATCCACAACAGCATCGGCTCAA TGGAACACTGGTCGGTCTATGCGGCCGAGCTCATGGCAATCTACTATGCTATTGGGCTGGTTTTCCACCTAG |
Gene | >Ani_SJS100_1|g11753.t1 ATGACAGCAAACCTTCGCATCTTACAGTTGAACATCATGAAATCGAGGGCAGGGATGGAAGCCCTCATCAACGAT CATCAAAGCCAGAACCTGGACCTGCTCCTGATTCAGGAACCGCCAAAGACAGCATACCACACCCATGTTAACCAT AGTGCTTGGCGACTCTACCGACCGACATACCCAGAAATACCGCGGTTTCGCAGCCTCCTCTATGTCAACCGGAGG ATCTCTACATCATCACACCGCCAAATCCAGTGTGGTCACCCAGATGTGGTGGCCGTTAAGATCTGGACCCCAGAG CTCCAGTACCTGGTGTTCTCGATCTATATCCAGCCAATCGCGTTGCATGACTCAATTGAAGCGAGCAGCGCACGC GAAATTTTGGCAGAAATCCAGCAAACCATCCAGGAACAAACAGAGCAGGGCGAACGCACGACGAAAATTATTCTG GCCGGAGACTTCAACCGCCACCACCCGGCATGGAGCCACCGTGCGGTACATCGCGGCTTCGCAGAACACGCAGAC GAACTAATAAATTTCTTTCAAGACCACGAGCTGCAATGGTGCCTGGCCCCAGGCGAGACGACATTCTGGTCCCTG AACAAACCTGGGACGACTTCAGTACTCGATCTCACACTTACTAACGACATGACGCGGCTGATCAAATGCCAACTT TATCATGACCACTACGGGTCCGACCACAGGGGCACGTACTCAGAGTGGAGCCTCCAACCAGAGCAAACTAGGAAG CCCAAACCGAGAAGAGCGTACGACCGAGCAGACTGGGCCCGAGTAGGCCAAACGATAATGAGGTCGATTAACCCA CAGTTGAGAATTCAATCCGAGCGGGACCTAGATCAGGCGGTCAACCATCTGATTCAAACTACAATAACTGCGCTC GACCAGCATGTGCCAGTACGGGCCCCATGCCCATACTCAAAGCGCTGGTTCACAGCAGATCTCAAGATCCAACAG GTGGAAGTCAACCAAACCCGCCGGAGGTGGCAAGACAGTTGTGCCACCCTTGGACCCAACCACCCAACGACAAAG GGAATGTTTGCAGAAATGCGCGAAAGAAGACGAAAATGGACAAGAGCAATTGAAAAAGCAAAAACGAGCCACTGG AGGGAGTTTCTTGACAAAGCAGGCGAAGGCCATCTATGGAAAGCAGCCACCTATATGCGCCCACGAGATGCTTAT ACGAGCATTCCAGCGATCAAAGTGGGCACGGAGGAGGTAACTGACAACCAAAGAAAAGCAGAGACGTTCCTTGAT TCCTTCTTTCCAAAAATGGCAGAACCCGAAGTGGAAGTAGAAAGCAACCCCACAGAAGAAGAACTGCCATGGGAG CCGATCACTGAACAGGAGATTTACCGATCACTCCGAGCCGCCAAGGGAACTACGGCCCCAGGTAGAGATGGAATT CCCACGCTTGTATGGAAACATCTGTGGATGTACCTGAAAGAAACGATTACCACTGTCTTCACCAAGTCAGTGGAT CTGGGCTACTACCCCAGACAATGGAAACAGGCGCGGATCGTAGTGCTGCGGAAGCCAGGAAAGCCAGACTATTCG GCGCCGGGAGCATACCGACCGATATCACTACTGAACACGCTGGGGAAGCTACTAGAAGCCGTTATGGCCCGACGA CTCTCCTACTGGGCGGAGAGATTTAAGCTACTCCCGGACACACAATTTGGAGGTAGACCAGGACGAAACACCGAG CAAGCTCTGCTGGTACTCGCCAACGCAGTATACCGAGCTTGGGAACGGTCTAGGGTGGTAACGCTGATCGCGTTC GACCTAAAAGGCGCGTTCAATGGAGTCCACCAAACCAGCCTCGACGCTCGGCTGCGAGCTAAAGGCATCCCACCA AAGGCCCGGCAATGGATCCGCAGCTTCATGGAAGACCGCCAAGCGAGCGTCACATTTGATGACTTTGAGAGTGAA AATCTACCACTGGAGCATGCCGGCCTGGCACAAGGATCCCCACTCTCACCGATTCTGTTTGGATTCTACAACTCG GACCTGGTGGACCAAGTGGTAGACCAAAATGGCGGTGCATCAGCTTTTATCGACGACTATTTCCGCTGGCGATCC TACCCAACAGTAGAAGAGAACATCAAGAAGATCCAGGAAGAAGACATCCCCCGAATTGAAGAGTGGGCGCGGCGA ACGGGTGCATCCTTTGCCGCCGAAAAGACTGAATTAATTCATCTTACCAGGCGGAAAGCGACCCACGGAAAAGGA CAAATTGTCATCGACGGCCAGGCTACCAAACCGGCCGACACTGCGAAACTTCTTGGAGTGATCTTTGACAAAGAG ATGCGCTGGAAGGAACATGTCCAGGAAGCGGTTAAACGGGCAACCAAAGTGAACATAGCCCTGAGCGGGCTCAGA CACCTCCGACCGGAGCAAATGCGCCAGCTATACCAAGCATGCGTAACACCAATTCTAGACTACGCATCCACAGTA TGGCACAATCCGCTCCGAGACAAGATACATCTGCGACTTCTGGAGACGGTACAGAGAACGGCTCTTATCCGAATC CTTTCAGCCTTCCGGACAGTATCTACTGCTGCACTCGAAGTTGAGTCCTATATCCTACCAACCCACTTGCGACTC AAGCAGCGGGGACAAATAGTGGCTGCTCGCTTCAGCACCCTGCCAGATGACCACCCGGTTCACCAGGTAATACGC CGAGCAAAGGAACGCAGCACCTATATCGGTAGCGGGGCCCGCTTTCCCCTAGCCGAAACACTGCGAACCATGAAC CTCGGGCGGCTGCAGGCCTTAGAAACAATCGACCCCAAACCACTTGCGCCATGGCGGAGCCAGCCCTTTACAGAA ATCAAGATAGAGCCTGATCGAGAGAAAGCGCAGTCCAACGCACTGGCACAGCAATCCACAACAGGTATCACAGTC TTCTCAGACGCTTCAGGAAAAGAGAATCAACTAGGCGCCGCAGCAGTAGCTCTTGACCGCAACCGGCAGATAACG GGGTCTCGACAAATCAGCATCGGCTCAATGGAACACTGGTCGGTCTATGCGGCCGAGCTCATGGCAATCTACTAT GCTATTGGGCTGGTTTTCCACCTAG |