Protein ID | Ani_SJS100_1|g1173.t1 |
Gene name | |
Location | scaffold_004:224228..225607 |
Strand | + |
Gene length (bp) | 1379 |
Transcript length (bp) | 1203 |
Coding sequence length (bp) | 1203 |
Protein length (aa) | 401 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12706 | Lactamase_B_2 | Beta-lactamase superfamily domain | 6.9E-32 | 114 | 357 |
PF13483 | Lactamase_B_3 | Beta-lactamase superfamily domain | 9.3E-11 | 98 | 204 |
Orthofinder run ID | 3 |
Orthogroup | 1474 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1173.t1 MVKATSAASTSAALYSLAVVLSPASEGPEDVKEKAHHLKNGFQNPWDSWKSPSVGDALHMWGGIITGKIKFPDVT PPTVPVQQPKFLPDRETSSLRATWLGHACYYVEFPNGLRVLFDPVFEDRCSPFSFMGPKRYTEMPCRIEDIPSID AVVISHNHYDHLSHPTVKEISRLHPNCHFFAPLGNKAWFSSIGIDKMTELDWWEERDIVLSPSHEPVTEAGAAGE GQNSNRSDITARISCLPSQHTSNRGVFDRSKTLWASWGIEAGGRKLWFAGDTGYRHVPELPAGADDHAPEYTFPS CPAFKQIGRFRGPFDLGLIPIGAYSPRWFMSPMHADPDDAVQIFRDTNCKRAMAIHWGTWVLTDEDVLEPPKKLK EALTKYGFPEVGAFDVCDIGESREF* |
Coding | >Ani_SJS100_1|g1173.t1 ATGGTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTTTACTCTCTGGCCGTTGTCCTCTCCCCGGCTTCC GAGGGACCTGAGGATGTCAAGGAGAAAGCCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGACTCATGGAAA TCGCCGTCAGTGGGTGACGCTCTTCACATGTGGGGAGGAATCATAACGGGGAAAATCAAATTCCCGGATGTCACG CCTCCTACTGTACCTGTTCAGCAGCCCAAGTTTCTGCCAGACCGAGAAACCTCTAGTCTACGGGCGACATGGCTT GGCCATGCTTGTTACTACGTCGAATTCCCCAATGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGACCGTTGC TCTCCCTTCTCATTCATGGGCCCAAAGCGCTACACTGAGATGCCATGCCGCATCGAGGACATCCCATCCATTGAT GCGGTTGTAATATCCCACAACCATTACGATCATCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTCCATCCC AATTGCCACTTCTTTGCACCCCTGGGCAATAAAGCATGGTTCAGCAGCATCGGGATTGACAAAATGACTGAACTG GATTGGTGGGAAGAGCGAGACATTGTTCTTTCACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCCGGCGAA GGCCAGAATTCAAATCGATCTGATATCACGGCTCGCATCAGCTGCTTGCCTTCGCAGCATACAAGCAATCGAGGT GTATTTGATCGATCAAAGACCCTGTGGGCGTCGTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTTGCAGGA GACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGGCGCCGATGACCATGCTCCGGAGTACACTTTCCCCTCA TGTCCCGCATTTAAACAAATTGGTCGATTCCGGGGGCCTTTCGACCTCGGGTTGATCCCGATTGGCGCCTACTCA CCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGATGATGCAGTACAAATTTTCCGGGATACCAACTGCAAG AGAGCCATGGCTATTCACTGGGGAACTTGGGTTTTGACAGATGAAGATGTCCTTGAACCGCCCAAGAAATTAAAG GAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGCGTTTGACGTTTGTGACATCGGCGAAAGCCGGGAATTC TAA |
Transcript | >Ani_SJS100_1|g1173.t1 ATGGTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTTTACTCTCTGGCCGTTGTCCTCTCCCCGGCTTCC GAGGGACCTGAGGATGTCAAGGAGAAAGCCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGACTCATGGAAA TCGCCGTCAGTGGGTGACGCTCTTCACATGTGGGGAGGAATCATAACGGGGAAAATCAAATTCCCGGATGTCACG CCTCCTACTGTACCTGTTCAGCAGCCCAAGTTTCTGCCAGACCGAGAAACCTCTAGTCTACGGGCGACATGGCTT GGCCATGCTTGTTACTACGTCGAATTCCCCAATGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGACCGTTGC TCTCCCTTCTCATTCATGGGCCCAAAGCGCTACACTGAGATGCCATGCCGCATCGAGGACATCCCATCCATTGAT GCGGTTGTAATATCCCACAACCATTACGATCATCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTCCATCCC AATTGCCACTTCTTTGCACCCCTGGGCAATAAAGCATGGTTCAGCAGCATCGGGATTGACAAAATGACTGAACTG GATTGGTGGGAAGAGCGAGACATTGTTCTTTCACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCCGGCGAA GGCCAGAATTCAAATCGATCTGATATCACGGCTCGCATCAGCTGCTTGCCTTCGCAGCATACAAGCAATCGAGGT GTATTTGATCGATCAAAGACCCTGTGGGCGTCGTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTTGCAGGA GACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGGCGCCGATGACCATGCTCCGGAGTACACTTTCCCCTCA TGTCCCGCATTTAAACAAATTGGTCGATTCCGGGGGCCTTTCGACCTCGGGTTGATCCCGATTGGCGCCTACTCA CCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGATGATGCAGTACAAATTTTCCGGGATACCAACTGCAAG AGAGCCATGGCTATTCACTGGGGAACTTGGGTTTTGACAGATGAAGATGTCCTTGAACCGCCCAAGAAATTAAAG GAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGCGTTTGACGTTTGTGACATCGGCGAAAGCCGGGAATTC TAA |
Gene | >Ani_SJS100_1|g1173.t1 ATGGTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTTTACTCTCTGGCCGTTGTCCTCTCCCCGGCTTCC GAGGGACCTGAGGATGTCAAGGAGAAAGCCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGAGTATGCCACT CTGTAGCTATCAGAAGACTTTATAGTATCGTGTTACTAACGCACCTCTGAAGCTCATGGAAATCGCCGTCAGTGG GTGACGCTCTTCACATGTGGGGGTAAGTTGCAAGACTTTCCTTGCTTTTACTATGCAAGCCTGACACTGCACTTT GAAGAGGAATCATAACGGGGAAAATCAAATTCCCGGATGTCACGCCTCCTACTGTACCTGTTCAGCAGCCCAAGT TTCTGCCAGACCGAGAAACCTCTAGTCTACGGGCGACATGGCTTGGCCATGCTTGTTACTACGTCGAATTCCCCA ATGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGACCGTTGCTCTCCCTTCTCATTCATGGGCCCAAAGCGCT ACACTGAGATGCCATGCCGCATCGAGGACATCCCATCCATTGATGCGGTTGTAATATCCCACAACCATTACGATC ATCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTCCATCCCAATTGCCACTTCTTTGCACCCCTGGGCAATA AAGCATGGTTCAGCAGCATCGGGATTGACAAAATGACTGAACTGGATTGGTGGGAAGAGCGAGACATTGTTCTTT CACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCCGGCGAAGGCCAGAATTCAAATCGATCTGATATCACGG CTCGCATCAGCTGCTTGCCTTCGCAGCATACAAGCAATCGAGGTGTATTTGATCGATCAAAGACCCTGTGGGCGT CGTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTTGCAGGGTATGTATAATCTCCGAAGAGATGCCTTCAAG TAATCTAACCAAGAACGTCATACAGAGACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGGCGCCGATGACC ATGCTCCGGAGTACACTTTCCCCTCATGTCCCGCATTTAAACAAATTGGTCGATTCCGGGGGCCTTTCGACCTCG GGTTGATCCCGATTGGCGCCTACTCACCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGATGATGCAGTAC AAATTTTCCGGGATACCAACTGCAAGAGAGCCATGGCTATTCACTGGGGAACTTGGGTTTTGACAGATGAAGATG TCCTTGAACCGCCCAAGAAATTAAAGGAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGCGTTTGACGTTT GTGACATCGGCGAAAGCCGGGAATTCTAA |