Protein ID | Ani_SJS100_1|g11716.t1 |
Gene name | |
Location | scaffold_363:1180..3111 |
Strand | + |
Gene length (bp) | 1931 |
Transcript length (bp) | 1677 |
Coding sequence length (bp) | 1677 |
Protein length (aa) | 559 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00615 | RGS | Regulator of G protein signaling domain | 1.1E-05 | 381 | 545 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 51 | 73 | 22 |
3 | 88 | 105 | 17 |
4 | 152 | 174 | 22 |
5 | 203 | 225 | 22 |
6 | 238 | 260 | 22 |
7 | 270 | 292 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11716.t1 MGCELGVTAASTPQPAYTPVSVWWACWAGAWTVIIASGMVYLIAHRNTPPLLLRGLGLSLSAVVLLHVYWASVQF GTMIGTIMPGDAEYWIMGTYLPCGIALFHASNSRFYHVAKLQEGYIIRSSGGNDLYSTRGKLGAVDRFRRLAYTT KILVLVTVASLVQVFLTVLMWLISRKWYRTWGIPGTEVHGTEMQQTSEMGRGWEWWPGVLGQVFWSWIVSPVVLW KSRHIHDTHGWRVQTIGCVIANLPATPMWLIALYVPAMEPVNQYWLPPQWICLSIWVMEVFAVLLPCREVMRHHA IRQGAFDSIARWEPNTNPFADRTMARRSASILAEFAGSGRESWDRSLGSSSSSRDSIFTKRALEYVLARNPAPLQ DFSAHRDFSGENIAFLTRVAEWKSSLPHAVWDSRISDYGDLTDLIREQFHRALCIYMMFISDRAQFPINISSQHR KELENVFEGPAGLLFEDARPANPAVPFDAPGYAPTPSASPIAPIKAYSGSLFTDNSRVQYWGQIPQTFNATVFDR AEESIKDLVLTNTWPKFVRSCGIAAEAHLLAGS* |
Coding | >Ani_SJS100_1|g11716.t1 ATGGGGTGCGAACTGGGGGTCACTGCCGCATCCACGCCCCAGCCAGCTTATACTCCAGTCAGTGTATGGTGGGCC TGCTGGGCGGGCGCCTGGACGGTCATTATTGCCTCTGGCATGGTCTATCTCATCGCTCATCGCAACACGCCTCCC CTCCTGCTGCGAGGCCTCGGGCTATCACTGTCCGCCGTTGTGTTGCTCCATGTCTATTGGGCTTCAGTACAATTT GGAACCATGATTGGCACCATCATGCCAGGGGATGCCGAGTACTGGATCATGGGCACGTATCTGCCGTGCGGCATT GCCCTATTTCACGCGTCGAACAGTCGCTTCTATCATGTTGCAAAGCTTCAGGAAGGCTATATCATTCGCAGCAGT GGTGGGAATGATTTATACTCCACGAGGGGTAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACC AAGATTCTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTATTTCTCACGGTCTTGATGTGGCTTATCTCCCGC AAATGGTACCGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAACGTCGGAAATGGGC CGGGGCTGGGAGTGGTGGCCTGGCGTGTTGGGACAGGTCTTCTGGTCCTGGATTGTGAGCCCCGTCGTCCTCTGG AAATCCCGTCACATCCACGACACCCACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCGGCG ACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGG ATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTAATGCGCCATCACGCT ATCCGACAAGGAGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCGTTTGCTGATCGCACCATGGCC CGCAGGTCAGCCTCCATTCTTGCCGAGTTCGCAGGGTCTGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGT TCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATATGTCTTGGCGCGCAATCCTGCCCCGCTGCAG GATTTCTCTGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCG CTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCAC CGCGCGCTGTGTATTTACATGATGTTCATCAGTGATCGCGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCGG AAGGAGCTGGAAAACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGAAGACGCGCGCCCGGCCAATCCTGCCGTT CCCTTTGATGCGCCAGGCTATGCTCCCACGCCCTCAGCGTCTCCGATCGCCCCCATAAAGGCCTACTCCGGTTCG TTATTCACCGACAACAGTCGGGTGCAATACTGGGGCCAGATTCCCCAGACATTTAATGCGACAGTCTTTGACCGA GCCGAGGAGAGCATCAAAGACCTCGTTCTCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCT GAGGCTCATTTGCTGGCGGGAAGCTAG |
Transcript | >Ani_SJS100_1|g11716.t1 ATGGGGTGCGAACTGGGGGTCACTGCCGCATCCACGCCCCAGCCAGCTTATACTCCAGTCAGTGTATGGTGGGCC TGCTGGGCGGGCGCCTGGACGGTCATTATTGCCTCTGGCATGGTCTATCTCATCGCTCATCGCAACACGCCTCCC CTCCTGCTGCGAGGCCTCGGGCTATCACTGTCCGCCGTTGTGTTGCTCCATGTCTATTGGGCTTCAGTACAATTT GGAACCATGATTGGCACCATCATGCCAGGGGATGCCGAGTACTGGATCATGGGCACGTATCTGCCGTGCGGCATT GCCCTATTTCACGCGTCGAACAGTCGCTTCTATCATGTTGCAAAGCTTCAGGAAGGCTATATCATTCGCAGCAGT GGTGGGAATGATTTATACTCCACGAGGGGTAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACC AAGATTCTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTATTTCTCACGGTCTTGATGTGGCTTATCTCCCGC AAATGGTACCGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAACGTCGGAAATGGGC CGGGGCTGGGAGTGGTGGCCTGGCGTGTTGGGACAGGTCTTCTGGTCCTGGATTGTGAGCCCCGTCGTCCTCTGG AAATCCCGTCACATCCACGACACCCACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCGGCG ACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTGG ATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTAATGCGCCATCACGCT ATCCGACAAGGAGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCCGTTTGCTGATCGCACCATGGCC CGCAGGTCAGCCTCCATTCTTGCCGAGTTCGCAGGGTCTGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGT TCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATATGTCTTGGCGCGCAATCCTGCCCCGCTGCAG GATTTCTCTGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCG CTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCAC CGCGCGCTGTGTATTTACATGATGTTCATCAGTGATCGCGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCGG AAGGAGCTGGAAAACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGAAGACGCGCGCCCGGCCAATCCTGCCGTT CCCTTTGATGCGCCAGGCTATGCTCCCACGCCCTCAGCGTCTCCGATCGCCCCCATAAAGGCCTACTCCGGTTCG TTATTCACCGACAACAGTCGGGTGCAATACTGGGGCCAGATTCCCCAGACATTTAATGCGACAGTCTTTGACCGA GCCGAGGAGAGCATCAAAGACCTCGTTCTCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCT GAGGCTCATTTGCTGGCGGGAAGCTAG |
Gene | >Ani_SJS100_1|g11716.t1 ATGGGGTGCGAACTGGGGGTCACTGCCGCATCCACGCCCCAGCCAGCTTATACTCCAGTCAGTGTATGGTGGGCC TGCTGGGCGGGCGCCTGGACGGTCATTATTGCCTCTGGCATGGTCTATCTCATCGCTCATCGCAACACGCCTCCC CTCCTGCTGCGAGGCCTCGGGCTATCACTGTCCGCCGTTGTGTTGCTCCATGTCTATTGGGCTTCAGTACAATTT GGAACCATGATTGGCACCATCATGCCAGGGGATGCCGAGTACTGGATCATGGGCACGTATCTGCCGTGCGGCATT GCCCTATTTCACGCGTCGAACAGTCGCTTCTATCATGTTGCAAAGCTTCAGGAAGGCTATATCATTCGCAGCAGT GGTGGGAATGATTTATACTCCACGAGGGGTAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACACTACC AAGATTCTCGTGCTTGTTACGGTGGCGTCGCTCGTTCAGGTAAAACGGCCACCACCTACTCCTATTGGCGATGAT ATCGGTGTCTAATTGAGTCATCAGGTATTTCTCACGGTCTTGATGTGGCTTATCTCCCGCAAATGGTACCGCACT TGGGGGATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGCAAACGTCGGAAATGGGCCGGGGCTGGGAGTGG TAAGAAGACCTCCAACATACACCCGGCGCATATATGACGCGAGCTGTGTGCTAAACGATATGCAGGTGGCCTGGC GTGTTGGGACAGGTCTTCTGGTCCTGGATTGTGAGCCCCGTCGTCCTCTGGAAATCCCGTCACATCCACGACACC CACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAAGTGAGTCAATCGGTCCGATGAGGTCTGTCGCACG ACTAACCCGTCATCTAGTCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTC AATCAGTACTGGCTACCGCCCCAGTGGTAGGTGCTCTCTGTGACCAACAGGAAAATAGAAACGAAAAAGAAAGGA ATCAGGAAAACAGGGCTGACACCTGTAGGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGC CGTGCCGGGAGGTAATGCGCCATCACGCTATCCGACAAGGAGCCTTCGATTCGATCGCACGGTGGGAACCAAATA CTAATCCGTTTGCTGATCGCACCATGGCCCGCAGGTCAGCCTCCATTCTTGCCGAGTTCGCAGGGTCTGGCCGGG AATCATGGGATAGATCTCTTGGCTCCAGTTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATATG TCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCTCTGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTC TGACCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGACTATGGAGATC TTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACATGATGTTCATCAGTGATCGCGCGCAGT TTCCAATCAACATCTCTTCGCAGCACCGGAAGGAGCTGGAAAACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTG AAGACGCGCGCCCGGCCAATCCTGCCGTTCCCTTTGATGCGCCAGGCTATGCTCCCACGCCCTCAGCGTCTCCGA TCGCCCCCATAAAGGCCTACTCCGGTTCGTTATTCACCGACAACAGTCGGGTGCAATACTGGGGCCAGATTCCCC AGACATTTAATGCGACAGTCTTTGACCGAGCCGAGGAGAGCATCAAAGACCTCGTTCTCACCAACACGTGGCCTA AGTTTGTTCGAAGTTGCGGCATCGCAGCTGAGGCTCATTTGCTGGCGGGAAGCTAG |