© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11707.t1 |
| Gene name | |
| Location | scaffold_354:5303..6204 |
| Strand | - |
| Gene length (bp) | 901 |
| Transcript length (bp) | 837 |
| Coding sequence length (bp) | 837 |
| Protein length (aa) | 279 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 22 | 17 |
| 2 | 32 | 49 | 17 |
| 3 | 56 | 74 | 18 |
| 4 | 89 | 111 | 22 |
| 5 | 118 | 137 | 19 |
| 6 | 147 | 169 | 22 |
| 7 | 181 | 200 | 19 |
| 8 | 215 | 237 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11707.t1 MPMDWAGAALFFCSLLLIFFAINECSHALDGWRTPYAYVTLIVGFFVLLAALYRPYSSGLFCFCGVFGIWLLYAV EYMENIMHVSPLVMVAYFAPFALGGILFSLLRGLFLHVLPGTVLLVVSGIGWLMAPLLFAIMPRGAGYWPYVFPA MICGTLGMDVTYNVTNIFVTASLPQRQQRLAAAVANSVIFLGISFWLGWGDFTSAQVDGDSRARYQAPLWIAEGL AGLGLITTVLFVKIKPAKSEVTVDEKEGNSGETEVPKEEMDVEVNEQAAIVLQ* |
| Coding | >Ani_SJS100_1|g11707.t1 ATGCCCATGGATTGGGCCGGGGCCGCCCTCTTCTTCTGCAGTCTTCTGCTGATCTTTTTCGCCATCAACGAATGC AGTCATGCACTCGACGGCTGGCGCACACCCTACGCCTATGTTACGTTGATAGTGGGTTTTTTCGTGCTGCTGGCG GCGCTTTATCGTCCTTACTCCTCGGGACTGTTCTGTTTCTGCGGCGTGTTTGGCATCTGGCTACTTTATGCTGTG GAGTACATGGAGAACATTATGCACGTCTCGCCCCTGGTCATGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGC ATCCTCTTTAGCCTGCTTCGGGGTTTGTTTCTGCATGTTCTCCCAGGCACAGTGCTTCTTGTAGTTTCGGGCATT GGATGGCTGATGGCACCGCTACTTTTCGCTATCATGCCGCGCGGGGCCGGCTACTGGCCCTACGTGTTTCCAGCC ATGATCTGCGGCACCTTGGGCATGGATGTCACATACAATGTCACTAATATCTTCGTTACCGCCTCTCTGCCCCAG CGACAACAGCGGCTGGCCGCTGCCGTCGCCAATAGCGTTATATTCCTAGGCATCAGTTTCTGGCTGGGGTGGGGT GACTTTACCTCAGCACAAGTGGATGGAGACTCGCGCGCGAGGTACCAGGCCCCACTCTGGATAGCGGAGGGGTTG GCTGGACTGGGACTGATCACCACGGTGCTCTTCGTGAAGATCAAGCCCGCCAAGAGTGAAGTGACTGTAGATGAG AAGGAGGGGAACTCGGGAGAAACGGAGGTGCCCAAGGAAGAAATGGACGTTGAGGTGAATGAACAGGCTGCGATT GTCTTGCAATGA |
| Transcript | >Ani_SJS100_1|g11707.t1 ATGCCCATGGATTGGGCCGGGGCCGCCCTCTTCTTCTGCAGTCTTCTGCTGATCTTTTTCGCCATCAACGAATGC AGTCATGCACTCGACGGCTGGCGCACACCCTACGCCTATGTTACGTTGATAGTGGGTTTTTTCGTGCTGCTGGCG GCGCTTTATCGTCCTTACTCCTCGGGACTGTTCTGTTTCTGCGGCGTGTTTGGCATCTGGCTACTTTATGCTGTG GAGTACATGGAGAACATTATGCACGTCTCGCCCCTGGTCATGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGC ATCCTCTTTAGCCTGCTTCGGGGTTTGTTTCTGCATGTTCTCCCAGGCACAGTGCTTCTTGTAGTTTCGGGCATT GGATGGCTGATGGCACCGCTACTTTTCGCTATCATGCCGCGCGGGGCCGGCTACTGGCCCTACGTGTTTCCAGCC ATGATCTGCGGCACCTTGGGCATGGATGTCACATACAATGTCACTAATATCTTCGTTACCGCCTCTCTGCCCCAG CGACAACAGCGGCTGGCCGCTGCCGTCGCCAATAGCGTTATATTCCTAGGCATCAGTTTCTGGCTGGGGTGGGGT GACTTTACCTCAGCACAAGTGGATGGAGACTCGCGCGCGAGGTACCAGGCCCCACTCTGGATAGCGGAGGGGTTG GCTGGACTGGGACTGATCACCACGGTGCTCTTCGTGAAGATCAAGCCCGCCAAGAGTGAAGTGACTGTAGATGAG AAGGAGGGGAACTCGGGAGAAACGGAGGTGCCCAAGGAAGAAATGGACGTTGAGGTGAATGAACAGGCTGCGATT GTCTTGCAATGA |
| Gene | >Ani_SJS100_1|g11707.t1 ATGCCCATGGATTGGGCCGGGGCCGCCCTCTTCTTCTGCAGTCTTCTGCTGATCTTTTTCGCCATCAACGAATGC AGTCATGCACTCGACGGCTGGCGCACACCCTACGCCTATGTTACGTTGATAGTGGGTTTTTTCGTGCTGCTGGCG GCGCTGTACGTCGAAGGCTGGGTATCCAAGGAGCCACTACTTCCACTTGGTCTCTTCCGGATCCCCCAGTTATCG TCCTTACTCCTCGGGACTGTTCTGTTTCTGCGGCGTGTTTGGCATCTGGCTACTTTATGCTGTGGAGTACATGGA GAACATTATGCACGTCTCGCCCCTGGTCATGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGCATCCTCTTTAG CCTGCTTCGGGGTTTGTTTCTGCATGTTCTCCCAGGCACAGTGCTTCTTGTAGTTTCGGGCATTGGATGGCTGAT GGCACCGCTACTTTTCGCTATCATGCCGCGCGGGGCCGGCTACTGGCCCTACGTGTTTCCAGCCATGATCTGCGG CACCTTGGGCATGGATGTCACATACAATGTCACTAATATCTTCGTTACCGCCTCTCTGCCCCAGCGACAACAGCG GCTGGCCGCTGCCGTCGCCAATAGCGTTATATTCCTAGGCATCAGTTTCTGGCTGGGGTGGGGTGACTTTACCTC AGCACAAGTGGATGGAGACTCGCGCGCGAGGTACCAGGCCCCACTCTGGATAGCGGAGGGGTTGGCTGGACTGGG ACTGATCACCACGGTGCTCTTCGTGAAGATCAAGCCCGCCAAGAGTGAAGTGACTGTAGATGAGAAGGAGGGGAA CTCGGGAGAAACGGAGGTGCCCAAGGAAGAAATGGACGTTGAGGTGAATGAACAGGCTGCGATTGTCTTGCAATG A |