Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11700.t1
Gene name
Locationscaffold_348:5808..6331
Strand-
Gene length (bp)523
Transcript length (bp)417
Coding sequence length (bp)417
Protein length (aa) 139

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 12 31 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11700.t1
MQLIRISPRFGVMLLFMVISVVFAIVDMCAIRVENRLGYPPGMEPFWKLAFVFKCLSDTIILDDFRSALDRLRYH
YHPDGVAPQETTHARGWSTNRLVDCVPEASIKRPEPRARRNLIYMLEPLGTFDTHWKEGSSLL*
Coding >Ani_SJS100_1|g11700.t1
ATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTGTATTTGCGATT
GTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTGGCG
TTTGTTTTCAAATGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCAC
TACCACCCGGACGGTGTGGCCCCCCAGGAGACCACGCACGCTCGCGGTTGGAGCACAAACCGGCTTGTTGACTGT
GTACCCGAGGCGTCTATCAAACGTCCCGAGCCACGGGCACGGCGTAACCTGATTTACATGCTGGAGCCACTGGGT
ACATTCGATACGCATTGGAAGGAGGGTTCTTCTCTTCTCTAA
Transcript >Ani_SJS100_1|g11700.t1
ATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTGTATTTGCGATT
GTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTGGCG
TTTGTTTTCAAATGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCAC
TACCACCCGGACGGTGTGGCCCCCCAGGAGACCACGCACGCTCGCGGTTGGAGCACAAACCGGCTTGTTGACTGT
GTACCCGAGGCGTCTATCAAACGTCCCGAGCCACGGGCACGGCGTAACCTGATTTACATGCTGGAGCCACTGGGT
ACATTCGATACGCATTGGAAGGAGGGTTCTTCTCTTCTCTAA
Gene >Ani_SJS100_1|g11700.t1
ATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTTGTATTTGCGATT
GTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGGTGAGC
GGCCGCCACTGACGAGGAGAAGATCAGCATGTTGACCGCTGTAGTTGGCGTTTGTTTTCAAATGCCTGAGCGACA
CCATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTACCACCCGGACGGTGTGGCCCCCC
AGGAGACCACGCACGCTCGCGGTTGGAGCACAAACCGGCTTGTTGACTGTGTACCCGAGGCGTCTATCAAACGTC
CCGAGCCAGTATGTCGGCCACCGGACATGGTGTAAAGCCTGGAGTATCGTGTGCCGGCACCCAGCGGGCACGGCG
TAACCTGATTTACATGCTGGAGCCACTGGGTACATTCGATACGCATTGGAAGGAGGGTTCTTCTCTTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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