© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11689.t1 |
| Gene name | |
| Location | scaffold_341:4320..5583 |
| Strand | + |
| Gene length (bp) | 1263 |
| Transcript length (bp) | 1263 |
| Coding sequence length (bp) | 1263 |
| Protein length (aa) | 421 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06738 | ThrE | Putative threonine/serine exporter | 1.5E-57 | 1 | 236 |
| PF12821 | ThrE_2 | Threonine/Serine exporter, ThrE | 5.5E-10 | 260 | 404 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 38 | 17 |
| 2 | 119 | 141 | 22 |
| 3 | 148 | 167 | 19 |
| 4 | 182 | 204 | 22 |
| 5 | 217 | 239 | 22 |
| 6 | 254 | 273 | 19 |
| 7 | 333 | 355 | 22 |
| 8 | 384 | 406 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11689.t1 MIYGAPTHRLERYAYHTAQALGLQFQSFYMPGCMMISFSSPGFYHGGFQIIRCVQGLNFAKLYDVRAIYKSVIHK KTPVEEACVLLDEILNRPEQFPTWLRVLSYGLASAFIGPVSYNAQPIDLPIIFILGTLIGFSELVLVPRSELYGY VFEILAAIVASFLGRVFGSLHWGSNQGFCFPAIAQASIVMILPGFTITSSALELQSRNMVSGAVRIVYGIVYTLF LSFGFLIGISIYGAIDKTASSATTCSTTYGVWWPIIFVIPFTFCFILVQNGKWSTMPPMLGFSLAGWAVNRFSNE KFGNVQPLSQALGALTIGVLANLYARIEHGLAATLMFPAIYVQVPGSLAATGSLISGVDIADQMTKNGTDELTPH QALVAQLNAGYTMVSIGVAITVGLSVSVLVIYPLRKRERSGIFSY* |
| Coding | >Ani_SJS100_1|g11689.t1 ATGATTTACGGTGCCCCAACGCATCGCCTGGAAAGGTATGCCTACCATACAGCACAGGCTCTAGGACTACAATTC CAGTCATTCTATATGCCGGGCTGTATGATGATCTCATTCAGCAGCCCGGGATTTTACCACGGGGGCTTTCAGATC ATCCGGTGCGTACAAGGGCTGAACTTCGCGAAGCTCTATGATGTGCGCGCCATATATAAGAGCGTCATTCACAAA AAGACTCCCGTTGAAGAGGCATGTGTCCTTCTTGACGAAATCCTGAACAGACCAGAGCAGTTTCCAACCTGGCTT CGAGTTCTGTCGTATGGGCTCGCATCTGCATTTATTGGACCTGTCTCATATAATGCTCAGCCGATCGATTTGCCT ATCATCTTTATCCTAGGCACCTTGATCGGTTTCTCCGAACTAGTGCTCGTCCCTCGGTCTGAGCTCTATGGCTAT GTGTTTGAGATTCTTGCTGCTATCGTGGCCTCTTTCCTTGGTCGCGTCTTTGGCTCCCTCCACTGGGGATCAAAT CAAGGTTTCTGCTTCCCCGCCATTGCTCAAGCATCCATTGTGATGATCCTACCAGGGTTTACTATAACCAGCAGT GCACTTGAGTTGCAGTCTAGGAACATGGTTTCAGGAGCCGTTCGCATAGTCTACGGGATTGTTTACACATTGTTT CTCTCTTTTGGATTTCTAATTGGCATATCAATCTACGGTGCCATCGATAAGACGGCTTCGTCAGCCACAACTTGC TCCACAACTTACGGGGTGTGGTGGCCAATAATCTTCGTGATACCTTTCACCTTCTGCTTCATCTTAGTCCAAAAC GGCAAATGGAGTACAATGCCACCGATGTTAGGTTTCTCCTTGGCAGGCTGGGCAGTCAACCGTTTCTCCAACGAA AAGTTTGGGAATGTCCAGCCCCTCTCCCAGGCCCTGGGAGCGCTGACGATTGGTGTCCTAGCGAATTTGTATGCG AGAATAGAGCACGGCCTTGCGGCTACACTTATGTTCCCTGCTATCTACGTTCAAGTTCCCGGGAGCCTAGCAGCC ACTGGCAGTCTTATTAGTGGCGTGGATATTGCAGACCAAATGACCAAAAATGGGACTGATGAGCTCACTCCTCAT CAGGCACTAGTCGCACAGCTCAATGCCGGATACACAATGGTTTCAATTGGTGTTGCTATTACGGTTGGGCTCTCT GTTAGTGTGCTAGTCATCTACCCGCTGCGTAAGAGGGAAAGAAGCGGCATATTCAGCTATTGA |
| Transcript | >Ani_SJS100_1|g11689.t1 ATGATTTACGGTGCCCCAACGCATCGCCTGGAAAGGTATGCCTACCATACAGCACAGGCTCTAGGACTACAATTC CAGTCATTCTATATGCCGGGCTGTATGATGATCTCATTCAGCAGCCCGGGATTTTACCACGGGGGCTTTCAGATC ATCCGGTGCGTACAAGGGCTGAACTTCGCGAAGCTCTATGATGTGCGCGCCATATATAAGAGCGTCATTCACAAA AAGACTCCCGTTGAAGAGGCATGTGTCCTTCTTGACGAAATCCTGAACAGACCAGAGCAGTTTCCAACCTGGCTT CGAGTTCTGTCGTATGGGCTCGCATCTGCATTTATTGGACCTGTCTCATATAATGCTCAGCCGATCGATTTGCCT ATCATCTTTATCCTAGGCACCTTGATCGGTTTCTCCGAACTAGTGCTCGTCCCTCGGTCTGAGCTCTATGGCTAT GTGTTTGAGATTCTTGCTGCTATCGTGGCCTCTTTCCTTGGTCGCGTCTTTGGCTCCCTCCACTGGGGATCAAAT CAAGGTTTCTGCTTCCCCGCCATTGCTCAAGCATCCATTGTGATGATCCTACCAGGGTTTACTATAACCAGCAGT GCACTTGAGTTGCAGTCTAGGAACATGGTTTCAGGAGCCGTTCGCATAGTCTACGGGATTGTTTACACATTGTTT CTCTCTTTTGGATTTCTAATTGGCATATCAATCTACGGTGCCATCGATAAGACGGCTTCGTCAGCCACAACTTGC TCCACAACTTACGGGGTGTGGTGGCCAATAATCTTCGTGATACCTTTCACCTTCTGCTTCATCTTAGTCCAAAAC GGCAAATGGAGTACAATGCCACCGATGTTAGGTTTCTCCTTGGCAGGCTGGGCAGTCAACCGTTTCTCCAACGAA AAGTTTGGGAATGTCCAGCCCCTCTCCCAGGCCCTGGGAGCGCTGACGATTGGTGTCCTAGCGAATTTGTATGCG AGAATAGAGCACGGCCTTGCGGCTACACTTATGTTCCCTGCTATCTACGTTCAAGTTCCCGGGAGCCTAGCAGCC ACTGGCAGTCTTATTAGTGGCGTGGATATTGCAGACCAAATGACCAAAAATGGGACTGATGAGCTCACTCCTCAT CAGGCACTAGTCGCACAGCTCAATGCCGGATACACAATGGTTTCAATTGGTGTTGCTATTACGGTTGGGCTCTCT GTTAGTGTGCTAGTCATCTACCCGCTGCGTAAGAGGGAAAGAAGCGGCATATTCAGCTATTGA |
| Gene | >Ani_SJS100_1|g11689.t1 ATGATTTACGGTGCCCCAACGCATCGCCTGGAAAGGTATGCCTACCATACAGCACAGGCTCTAGGACTACAATTC CAGTCATTCTATATGCCGGGCTGTATGATGATCTCATTCAGCAGCCCGGGATTTTACCACGGGGGCTTTCAGATC ATCCGGTGCGTACAAGGGCTGAACTTCGCGAAGCTCTATGATGTGCGCGCCATATATAAGAGCGTCATTCACAAA AAGACTCCCGTTGAAGAGGCATGTGTCCTTCTTGACGAAATCCTGAACAGACCAGAGCAGTTTCCAACCTGGCTT CGAGTTCTGTCGTATGGGCTCGCATCTGCATTTATTGGACCTGTCTCATATAATGCTCAGCCGATCGATTTGCCT ATCATCTTTATCCTAGGCACCTTGATCGGTTTCTCCGAACTAGTGCTCGTCCCTCGGTCTGAGCTCTATGGCTAT GTGTTTGAGATTCTTGCTGCTATCGTGGCCTCTTTCCTTGGTCGCGTCTTTGGCTCCCTCCACTGGGGATCAAAT CAAGGTTTCTGCTTCCCCGCCATTGCTCAAGCATCCATTGTGATGATCCTACCAGGGTTTACTATAACCAGCAGT GCACTTGAGTTGCAGTCTAGGAACATGGTTTCAGGAGCCGTTCGCATAGTCTACGGGATTGTTTACACATTGTTT CTCTCTTTTGGATTTCTAATTGGCATATCAATCTACGGTGCCATCGATAAGACGGCTTCGTCAGCCACAACTTGC TCCACAACTTACGGGGTGTGGTGGCCAATAATCTTCGTGATACCTTTCACCTTCTGCTTCATCTTAGTCCAAAAC GGCAAATGGAGTACAATGCCACCGATGTTAGGTTTCTCCTTGGCAGGCTGGGCAGTCAACCGTTTCTCCAACGAA AAGTTTGGGAATGTCCAGCCCCTCTCCCAGGCCCTGGGAGCGCTGACGATTGGTGTCCTAGCGAATTTGTATGCG AGAATAGAGCACGGCCTTGCGGCTACACTTATGTTCCCTGCTATCTACGTTCAAGTTCCCGGGAGCCTAGCAGCC ACTGGCAGTCTTATTAGTGGCGTGGATATTGCAGACCAAATGACCAAAAATGGGACTGATGAGCTCACTCCTCAT CAGGCACTAGTCGCACAGCTCAATGCCGGATACACAATGGTTTCAATTGGTGTTGCTATTACGGTTGGGCTCTCT GTTAGTGTGCTAGTCATCTACCCGCTGCGTAAGAGGGAAAGAAGCGGCATATTCAGCTATTGA |