Protein ID | Ani_SJS100_1|g11685.t1 |
Gene name | |
Location | scaffold_339:1978..3922 |
Strand | - |
Gene length (bp) | 1944 |
Transcript length (bp) | 1644 |
Coding sequence length (bp) | 1644 |
Protein length (aa) | 548 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 32 | 19 |
2 | 66 | 88 | 22 |
3 | 101 | 123 | 22 |
4 | 166 | 188 | 22 |
5 | 197 | 214 | 17 |
6 | 224 | 245 | 21 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11685.t1 MYKQATQIQYVDWYGIWVAALLGVWLIARLAHQLGRWTVQRPIAVSLGRRIGHELPWLAQTIDISTAFEAILVVV LLGANIVLLLVSAHGWADIQQRAAKLAVLNLLPLSTGLTFGLPAHLLGISRSAVAWLHRWFARVMAAHSLLHGAI AIARADNPIPSLRHDWVPLLAAAAILMMIPVTLHVLVRRHCQVAMKIHYLLAITAMVALAYHTWDRGSESRWQVV GAGALWMVLSVVAVSHAVFVQQRWSAGRPTVTIRPFQELLRMDITVSPHWHIWPGQYVYLWLPHAGFRSCFQLQP FYVAYWDDPPGPRILYVLTRPRASSLSARLYLREWLHQRRQPALLLGPYGPSIDFSPFGTIVFIVEDTGILRVLP YIRMLVQASEQRRAMVRKLKIVWQMQDFDHQCWLGDWMQDLLDLDRGEFKILEFRLYYLTKGTSVNPGDEFGERI KLCQGPLMAREIVQGHLSKRRGKLAVGVCARQSIREQVRDAVQPQTGADIKLCDFDLEPRHTWEAPCRDNDAATN LAQSDHQKWIASCIIEGNPQMQ* |
Coding | >Ani_SJS100_1|g11685.t1 ATGTATAAACAAGCCACCCAAATCCAATACGTTGACTGGTACGGGATATGGGTGGCGGCTTTGCTGGGCGTTTGG CTTATTGCGCGGTTGGCGCACCAGCTTGGCCGATGGACTGTCCAACGCCCAATCGCGGTCTCCCTTGGGCGGCGC ATCGGCCATGAGTTGCCATGGCTCGCCCAGACTATTGATATATCCACCGCATTCGAGGCCATTTTGGTCGTGGTG CTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGACATCCAGCAACGCGCGGCGAAG CTCGCCGTCCTGAACCTATTGCCGCTCAGTACGGGCCTGACCTTTGGCCTCCCGGCCCATCTGCTCGGAATTAGC CGCTCTGCCGTTGCGTGGTTGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCATTCCCTGCTTCATGGAGCCATT GCCATCGCCAGAGCGGACAACCCGATCCCCTCGCTGAGGCATGACTGGGTTCCCTTGCTGGCAGCTGCTGCCATT TTGATGATGATCCCCGTGACCTTGCATGTGCTCGTCCGACGGCACTGCCAGGTCGCCATGAAAATCCACTACCTT CTGGCAATCACAGCAATGGTGGCCCTGGCGTATCACACGTGGGACCGAGGGTCAGAATCCCGCTGGCAAGTGGTT GGTGCTGGGGCCCTATGGATGGTGCTGAGTGTCGTTGCCGTCTCTCATGCAGTTTTCGTCCAACAACGCTGGAGT GCTGGACGGCCCACCGTAACCATACGTCCCTTTCAGGAGCTGCTTCGCATGGACATTACCGTGTCCCCCCATTGG CACATCTGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCGCTCGTGCTTCCAACTCCAGCCC TTCTATGTTGCTTACTGGGATGATCCGCCCGGACCGCGCATCCTGTACGTGCTGACCCGACCGCGAGCCTCCAGC CTCAGTGCACGACTCTACCTCCGCGAGTGGCTACACCAGCGTCGACAGCCCGCACTGTTGCTGGGGCCATACGGC CCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTTATCGTAGAGGACACTGGCATTTTGCGAGTGCTTCCC TATATCCGCATGCTCGTCCAAGCGAGCGAGCAGCGGCGGGCCATGGTACGCAAGTTGAAAATCGTGTGGCAGATG CAAGACTTTGACCATCAATGCTGGCTGGGTGACTGGATGCAGGACCTTTTGGACCTGGACCGCGGTGAATTTAAG ATTCTTGAATTTCGTCTATATTACCTTACGAAGGGGACATCCGTTAACCCCGGTGACGAATTCGGAGAACGAATC AAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGTCCAAGGCCACCTGAGCAAGCGCCGTGGGAAGCTAGCT GTCGGTGTGTGCGCCCGTCAATCCATTCGCGAACAAGTCCGGGATGCAGTCCAGCCACAGACGGGGGCAGACATC AAACTTTGCGACTTCGATCTCGAGCCGCGTCACACCTGGGAGGCCCCTTGTCGCGACAATGACGCCGCCACTAAT CTTGCGCAAAGTGATCATCAAAAGTGGATTGCGTCTTGCATTATTGAAGGAAATCCTCAAATGCAGTGA |
Transcript | >Ani_SJS100_1|g11685.t1 ATGTATAAACAAGCCACCCAAATCCAATACGTTGACTGGTACGGGATATGGGTGGCGGCTTTGCTGGGCGTTTGG CTTATTGCGCGGTTGGCGCACCAGCTTGGCCGATGGACTGTCCAACGCCCAATCGCGGTCTCCCTTGGGCGGCGC ATCGGCCATGAGTTGCCATGGCTCGCCCAGACTATTGATATATCCACCGCATTCGAGGCCATTTTGGTCGTGGTG CTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGACATCCAGCAACGCGCGGCGAAG CTCGCCGTCCTGAACCTATTGCCGCTCAGTACGGGCCTGACCTTTGGCCTCCCGGCCCATCTGCTCGGAATTAGC CGCTCTGCCGTTGCGTGGTTGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCATTCCCTGCTTCATGGAGCCATT GCCATCGCCAGAGCGGACAACCCGATCCCCTCGCTGAGGCATGACTGGGTTCCCTTGCTGGCAGCTGCTGCCATT TTGATGATGATCCCCGTGACCTTGCATGTGCTCGTCCGACGGCACTGCCAGGTCGCCATGAAAATCCACTACCTT CTGGCAATCACAGCAATGGTGGCCCTGGCGTATCACACGTGGGACCGAGGGTCAGAATCCCGCTGGCAAGTGGTT GGTGCTGGGGCCCTATGGATGGTGCTGAGTGTCGTTGCCGTCTCTCATGCAGTTTTCGTCCAACAACGCTGGAGT GCTGGACGGCCCACCGTAACCATACGTCCCTTTCAGGAGCTGCTTCGCATGGACATTACCGTGTCCCCCCATTGG CACATCTGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCGCTCGTGCTTCCAACTCCAGCCC TTCTATGTTGCTTACTGGGATGATCCGCCCGGACCGCGCATCCTGTACGTGCTGACCCGACCGCGAGCCTCCAGC CTCAGTGCACGACTCTACCTCCGCGAGTGGCTACACCAGCGTCGACAGCCCGCACTGTTGCTGGGGCCATACGGC CCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTTATCGTAGAGGACACTGGCATTTTGCGAGTGCTTCCC TATATCCGCATGCTCGTCCAAGCGAGCGAGCAGCGGCGGGCCATGGTACGCAAGTTGAAAATCGTGTGGCAGATG CAAGACTTTGACCATCAATGCTGGCTGGGTGACTGGATGCAGGACCTTTTGGACCTGGACCGCGGTGAATTTAAG ATTCTTGAATTTCGTCTATATTACCTTACGAAGGGGACATCCGTTAACCCCGGTGACGAATTCGGAGAACGAATC AAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGTCCAAGGCCACCTGAGCAAGCGCCGTGGGAAGCTAGCT GTCGGTGTGTGCGCCCGTCAATCCATTCGCGAACAAGTCCGGGATGCAGTCCAGCCACAGACGGGGGCAGACATC AAACTTTGCGACTTCGATCTCGAGCCGCGTCACACCTGGGAGGCCCCTTGTCGCGACAATGACGCCGCCACTAAT CTTGCGCAAAGTGATCATCAAAAGTGGATTGCGTCTTGCATTATTGAAGGAAATCCTCAAATGCAGTGA |
Gene | >Ani_SJS100_1|g11685.t1 ATGTATAAACAAGCCACCCAAATCCAATACGTTGACTGGTACGGGATATGGGTGGCGGCTTTGCTGGGCGTTTGG CTTATTGCGCGGTTGGCGCACCAGCTTGGCCGATGGACTGTCCAACGCCCAATCGCGGTCTCCCTTGGGCGGCGC ATCGGCCATGAGTTGCCATGGCTCGCCCAGACTATTGATATATCCACCGCATTCGAGGCCATTTTGGTCGTGGTG CTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGACATCCAGCAACGCGCGGCGAAG CTCGCCGTCCTGAACCTATTGCCGCTCAGTACGGGCCTGACCTTTGGCCTCCCGGCCCATCTGCTCGGAATTAGC CGCTCTGCCGTTGCGTGGTTGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCATTCCCTGCTTCATGGAGCCATT GCCATCGCCAGAGCGGACAACCCGATCCCCTCGCTGAGGCATGACTGGGTTCCCTTGCTGGTCAGTCACCACGCC GCCCCTCGATGATTATTACTGTCACCCGAGAGCGATACCACTAACCAGGGTTAGGCAGCTGCTGCCATTTTGATG ATGATCCCCGTGACCTTGCATGTGCTCGTCCGACGGCACTGCCAGGTCGCCATGAAAATCCACTACCTTCTGGCA ATCACAGCAATGGTGGCCCTGGCGTATCACACGTGGGACCGAGGGTCAGAATCCCGCTGGCAAGTGGTTGGTGCT GGGGCCCTATGGATGGTGCTGAGTGTCGTTGCCGTCTCTCATGCAGTTTTCGTCCAACAACGCTGGAGTGCTGGA CGGCCCACCGTAACCATACGTCCCTTTCAGGAGCTGCTTCGCATGGACATTACCGTGTCCCCCCATTGGCACATC TGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCGCTCGTGCTTCCAACTCCAGCCCTTCTAT GTTGCTTACTGGGATGATCCGCCCGGACCGCGCATCCTGTACGTGCTGACCCGACCGCGAGCCTCCAGCCTCAGT GCACGACTCTACCTCCGCGAGTGGCTACACCAGCGTCGACAGCCCGCACTGTTGCTGGGGCCATACGGCCCATCG ATCGACTTTTCTCCGTTTGGGACGATCGTGTTTATCGTAGAGGACACTGGCATTTTGCGAGTGCTTCCCTATATC CGCATGCTCGTCCAAGCGAGCGAGCAGCGGCGGGCCATGGTACGCAAGTTGAAAATCGTGTGGCAGATGCAAGAC TTTGGTATGACCGTCTCTCCATGCACTGTCCGAATCCGCAGAGATCTTAACGAATCCTAGACCATCAATGCTGGC TGGGTGACTGGATGCAGGACCTTTTGGACCTGGACCGCGGTGAATTTAAGGTGTGTGACAAACCCTCTGCGGCCA TTGATGCCACCCTGACTCTGATAGATTCTTGAATTTCGTCTATATTACCTTACGAAGGGGACATCCGTTAACCCC GGTGACGAATTCGGAGAACGAATCAAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGTCCAAGGCCACCTG AGCAAGCGCCGTGGGAAGCTAGCTGTCGGTGGTAGGTTTAGTTCCCACCCGATCGATTCACCTATCAACCTACAA CGGCTGTGTGATGAGGGGGCTTCTGCCAGACCGTCGAACGTGCGCCCGATGACTAATATTTGTTCACTAACGTTA TAACTAGTGTGCGCCCGTCAATCCATTCGCGAACAAGTCCGGGATGCAGTCCAGCCACAGACGGGGGCAGACATC AAACTTTGCGACTTCGATCTCGAGCCGCGTCACACCTGGGAGGCCCCTTGTCGCGACAATGACGCCGCCACTAAT CTTGCGCAAAGTGATCATCAAAAGTGGATTGCGTCTTGCATTATTGAAGGAAATCCTCAAATGCAGTGA |