Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g11680.t1
Gene name
Location	scaffold_336:987..2044
Strand	-
Gene length (bp)	1057
Transcript length (bp)	975
Coding sequence length (bp)	975
Protein length (aa)	325

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	56	78	22
2	218	240	22
3	255	277	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g11680.t1 MVSTVGKPAHIQFARNGTRGGRHMSSQPPTSGLTIEDALAPITSTAAKTRKKRQIATLIYAGLLAASLVADILAL LFLTRPPVQQAGVATLHLNGEGLLSKRGKKAYTMGETYVTVSSASIDDNIAGTTAAASNMPLLTATTAPDRPGFL TGDTNGSNWISIGTQALCFQAGPSRRVCHPFPANLSTILPPSMQLVLGDSILQLQNFERSAAVTARRGARSVMAI GLVLISVAVTLVLIFSRWSWACVHRLKWLMMAVASLCGLVCFTVSSGVLGTLQSSIEEEVRRGIPGIARMEWGSA SRYSLGAMCCAIVAFGCSLASQAI*
Coding	>Ani_SJS100_1\|g11680.t1 ATGGTATCTACTGTGGGAAAGCCGGCGCACATCCAGTTTGCACGCAACGGCACCCGAGGAGGACGGCATATGTCT TCACAACCACCCACCAGCGGTCTGACGATTGAAGATGCCCTGGCCCCAATTACGTCCACTGCAGCAAAGACCCGA AAAAAGAGGCAAATTGCTACCTTGATATATGCAGGGCTTCTTGCAGCCTCCCTAGTGGCCGACATTTTGGCTCTT TTGTTCTTGACCAGACCCCCTGTTCAGCAGGCGGGAGTGGCCACTCTTCATTTAAACGGGGAAGGACTCCTGTCC AAGCGCGGCAAGAAGGCTTATACCATGGGCGAGACCTACGTCACAGTATCATCTGCCAGCATAGACGACAATATT GCTGGGACCACCGCAGCAGCTAGTAATATGCCTCTCCTCACAGCAACCACGGCTCCTGATCGCCCTGGCTTCTTG ACAGGTGATACGAATGGATCCAACTGGATTTCTATCGGTACCCAAGCACTGTGCTTTCAGGCTGGTCCAAGCCGT CGGGTGTGTCATCCGTTCCCGGCAAACCTTTCAACTATTCTGCCTCCTTCCATGCAACTCGTGCTGGGTGACTCT ATTTTACAGTTACAAAACTTTGAGCGGTCGGCTGCTGTTACGGCCAGGAGAGGTGCCCGGTCTGTCATGGCCATT GGTCTGGTACTGATATCTGTTGCCGTGACCCTGGTCCTGATTTTTTCACGGTGGTCGTGGGCTTGTGTGCACAGG CTGAAGTGGCTCATGATGGCAGTTGCCAGCCTGTGCGGCCTGGTATGCTTCACAGTATCCTCCGGTGTTCTGGGC ACTCTGCAGTCTTCTATCGAGGAGGAGGTGCGTCGTGGCATTCCGGGTATTGCTCGGATGGAATGGGGATCCGCG AGCCGGTATAGCTTAGGGGCCATGTGTTGTGCTATTGTAGCTTTTGGCTGCAGCCTTGCATCCCAGGCTATATAA
Transcript	>Ani_SJS100_1\|g11680.t1 ATGGTATCTACTGTGGGAAAGCCGGCGCACATCCAGTTTGCACGCAACGGCACCCGAGGAGGACGGCATATGTCT TCACAACCACCCACCAGCGGTCTGACGATTGAAGATGCCCTGGCCCCAATTACGTCCACTGCAGCAAAGACCCGA AAAAAGAGGCAAATTGCTACCTTGATATATGCAGGGCTTCTTGCAGCCTCCCTAGTGGCCGACATTTTGGCTCTT TTGTTCTTGACCAGACCCCCTGTTCAGCAGGCGGGAGTGGCCACTCTTCATTTAAACGGGGAAGGACTCCTGTCC AAGCGCGGCAAGAAGGCTTATACCATGGGCGAGACCTACGTCACAGTATCATCTGCCAGCATAGACGACAATATT GCTGGGACCACCGCAGCAGCTAGTAATATGCCTCTCCTCACAGCAACCACGGCTCCTGATCGCCCTGGCTTCTTG ACAGGTGATACGAATGGATCCAACTGGATTTCTATCGGTACCCAAGCACTGTGCTTTCAGGCTGGTCCAAGCCGT CGGGTGTGTCATCCGTTCCCGGCAAACCTTTCAACTATTCTGCCTCCTTCCATGCAACTCGTGCTGGGTGACTCT ATTTTACAGTTACAAAACTTTGAGCGGTCGGCTGCTGTTACGGCCAGGAGAGGTGCCCGGTCTGTCATGGCCATT GGTCTGGTACTGATATCTGTTGCCGTGACCCTGGTCCTGATTTTTTCACGGTGGTCGTGGGCTTGTGTGCACAGG CTGAAGTGGCTCATGATGGCAGTTGCCAGCCTGTGCGGCCTGGTATGCTTCACAGTATCCTCCGGTGTTCTGGGC ACTCTGCAGTCTTCTATCGAGGAGGAGGTGCGTCGTGGCATTCCGGGTATTGCTCGGATGGAATGGGGATCCGCG AGCCGGTATAGCTTAGGGGCCATGTGTTGTGCTATTGTAGCTTTTGGCTGCAGCCTTGCATCCCAGGCTATATAA
Gene	>Ani_SJS100_1\|g11680.t1 ATGGTATCTACTGTGGGAAAGCCGGCGCACATCCAGTTTGCACGCAACGGCACCCGAGGAGGACGGCATATGTCT TCACAACCACCCACCAGCGGTCTGACGATTGAAGATGCCCTGGCCCCAATTACGTCCACTGCAGCAAAGACCCGA AAAAAGAGGCAAATTGCTACCTTGATATATGCAGGGCTTCTTGCAGCCTCCCTAGTGGCCGACATTTTGGCTCTT TTGTTCTTGACCAGACCCCCTGTTCAGCAGGCGGGAGTGGCCACTCTTCATGTGAGTTGGTAACCACTACTGAGC ATCTGCAGTAATACAATGTGCAGCAACTGAGTTGGACATAACTAATCACTTTTGTCAGTTAAACGGGGAAGGACT CCTGTCCAAGCGCGGCAAGAAGGCTTATACCATGGGCGAGACCTACGTCACAGTATCATCTGCCAGCATAGACGA CAATATTGCTGGGACCACCGCAGCAGCTAGTAATATGCCTCTCCTCACAGCAACCACGGCTCCTGATCGCCCTGG CTTCTTGACAGGTGATACGAATGGATCCAACTGGATTTCTATCGGTACCCAAGCACTGTGCTTTCAGGCTGGTCC AAGCCGTCGGGTGTGTCATCCGTTCCCGGCAAACCTTTCAACTATTCTGCCTCCTTCCATGCAACTCGTGCTGGG TGACTCTATTTTACAGTTACAAAACTTTGAGCGGTCGGCTGCTGTTACGGCCAGGAGAGGTGCCCGGTCTGTCAT GGCCATTGGTCTGGTACTGATATCTGTTGCCGTGACCCTGGTCCTGATTTTTTCACGGTGGTCGTGGGCTTGTGT GCACAGGCTGAAGTGGCTCATGATGGCAGTTGCCAGCCTGTGCGGCCTGGTATGCTTCACAGTATCCTCCGGTGT TCTGGGCACTCTGCAGTCTTCTATCGAGGAGGAGGTGCGTCGTGGCATTCCGGGTATTGCTCGGATGGAATGGGG ATCCGCGAGCCGGTATAGCTTAGGGGCCATGTGTTGTGCTATTGTAGCTTTTGGCTGCAGCCTTGCATCCCAGGC TATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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