Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11663.t1
Gene name
Locationscaffold_323:5957..7006
Strand-
Gene length (bp)1049
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 44 66 22
3 71 93 22
4 100 122 22
5 151 168 17
6 181 203 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11663.t1
MTPTAGERPRDTDILVVEAWGQGLLVGSLILMTAITTANMKKEVLLHKLIVAELALALGHGTFIFLHAPAQGWYL
SATAVGLTILHTLHNVIAWMKIRGFFTSWGTRLYLISLLAAQPYWVIKIYANFTFFNRGQALYTTTRPLEPLFRD
PWWIFTTCFLLYIIQRGYECSLMQLIRISPRFGVMLLFMVISIVFAIVDMCAIRVENRLGYPPGMEPFWKLAFVF
KCLRDTIILDDFGGALVRLRHHHHPDVLPLQEPDTHARCRRTNKLVGSVPEASVRRPDPVCRPPDMV*
Coding >Ani_SJS100_1|g11663.t1
ATGACGCCGACTGCTGGCGAGCGTCCTAGAGACACGGACATTCTTGTCGTGGAGGCATGGGGACAAGGATTGCTG
GTGGGCTCCCTCATTCTCATGACCGCCATCACCACGGCCAACATGAAGAAAGAGGTACTGCTGCACAAACTTATC
GTAGCAGAGCTCGCTCTGGCCCTTGGACACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTT
TCGGCCACGGCCGTCGGCCTCACGATTTTGCACACCCTCCACAACGTAATCGCGTGGATGAAGATTCGCGGATTT
TTCACCTCCTGGGGCACGCGACTGTATCTGATCAGCTTGCTGGCGGCCCAGCCGTACTGGGTTATCAAAATCTAC
GCCAACTTTACCTTTTTCAATCGGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAGCCGCTGTTTCGGGAC
CCGTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATGAGTGTTCGCTGATGCAGTTG
ATCCGCATCAGCCCACGTTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCATTGTATTTGCGATTGTGGACATG
TGTGCGATCCGGGTCGAGAATCGCCTAGGTTACCCCCCGGGCATGGAGCCGTTTTGGAAGCTGGCGTTTGTATTC
AAGTGCCTGAGGGACACCATCATCTTGGATGACTTTGGGGGCGCCCTGGTTCGACTGCGCCACCACCATCACCCG
GATGTCCTGCCACTGCAGGAGCCCGACACGCATGCTCGCTGTCGGAGAACAAATAAGCTTGTGGGCAGTGTACCT
GAAGCGTCTGTCAGACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA
Transcript >Ani_SJS100_1|g11663.t1
ATGACGCCGACTGCTGGCGAGCGTCCTAGAGACACGGACATTCTTGTCGTGGAGGCATGGGGACAAGGATTGCTG
GTGGGCTCCCTCATTCTCATGACCGCCATCACCACGGCCAACATGAAGAAAGAGGTACTGCTGCACAAACTTATC
GTAGCAGAGCTCGCTCTGGCCCTTGGACACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTT
TCGGCCACGGCCGTCGGCCTCACGATTTTGCACACCCTCCACAACGTAATCGCGTGGATGAAGATTCGCGGATTT
TTCACCTCCTGGGGCACGCGACTGTATCTGATCAGCTTGCTGGCGGCCCAGCCGTACTGGGTTATCAAAATCTAC
GCCAACTTTACCTTTTTCAATCGGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAGCCGCTGTTTCGGGAC
CCGTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATGAGTGTTCGCTGATGCAGTTG
ATCCGCATCAGCCCACGTTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCATTGTATTTGCGATTGTGGACATG
TGTGCGATCCGGGTCGAGAATCGCCTAGGTTACCCCCCGGGCATGGAGCCGTTTTGGAAGCTGGCGTTTGTATTC
AAGTGCCTGAGGGACACCATCATCTTGGATGACTTTGGGGGCGCCCTGGTTCGACTGCGCCACCACCATCACCCG
GATGTCCTGCCACTGCAGGAGCCCGACACGCATGCTCGCTGTCGGAGAACAAATAAGCTTGTGGGCAGTGTACCT
GAAGCGTCTGTCAGACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA
Gene >Ani_SJS100_1|g11663.t1
ATGACGCCGACTGCTGGCGAGCGTCCTAGAGACACGGACATTCTTGTCGTGGAGGCATGGGGACAAGGATTGCTG
GTGGGCTCCCTCATTCTCATGACCGCCATCACCACGGCCAACATGAAGAAAGAGGTACTGCTGCACAAACTTATC
GTAGCAGAGGTAGGTCGCACTGTCTGGTTGGGGCGAATGGCGCACTAGTCCCTGCTGATATGGACGTCTAGCTCG
CTCTGGCCCTTGGACACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCACGGCCG
TCGGCCTCACGATTTTGCACACCCTCCACAACGTAATCGCGTGGATGAAGATTCGCGGATTTTTCACCTCCTGGG
GCACGCGACTGTATCTGATCAGCTTGCTGGCGGCCCAGCCGTACTGGGTTATCAAAATCTACGCCAACTTTACCT
TTTTCAATCGGGGCCAGGCCTTATATACCACCACTCGGCCACTCGAGCCGCTGTTTCGGTGCGGTGTCCGAACGC
GATTCTCCCCCACACCCCACGTTGCTGATCCAGATCTAGGGACCCGTGGTGGATCTTCACCACCTGCTTTCTCCT
GTACATCATCCAGCGTGGGTATGAGTGTTCGCTGATGCAGTTGATCCGCATCAGCCCACGTTTCGGCGTCATGCT
CTTGTTCATGGTGATCTCCATTGTATTTGCGATTGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGTTA
CCCCCCGGGCATGGAGCCGTTTTGGAAGGTAAATAGCCGCCACTGACGGGACAAAGATCAGCATGCTAACCCTGC
GGCAGCTGGCGTTTGTATTCAAGTGCCTGAGGGACACCATCATCTTGGATGACTTTGGGGGCGCCCTGGTTCGAC
TGCGCCACCACCATCACCCGGATGTCCTGCCACTGCAGGAGCCCGACACGCATGCTCGCTGTCGGAGAACAAATA
AGCTTGTGGGCAGTGTACCTGAAGCGTCTGTCAGACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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