Protein ID | Ani_SJS100_1|g11648.t1 |
Gene name | |
Location | scaffold_312:1984..4146 |
Strand | + |
Gene length (bp) | 2162 |
Transcript length (bp) | 1299 |
Coding sequence length (bp) | 1299 |
Protein length (aa) | 433 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13391 | HNH_2 | HNH endonuclease | 1.2E-15 | 216 | 329 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11648.t1 MRCPGPPCRHDGQYCWQDPLGKKHYKLKTHHLRSLVKFVENGGELETHEDVPDDIRQQLYGEEEQRLEKQKKGGQ NAQGGTMWPPININVLPSQSSHPSQMYSNASPSVTCGPIDIPGPLDTAIDEYTAWQKSRVSRDSFKEQMDIARNV ALENCLDLRQIHKDQDSGFFVSQGVKVGAARRFVTLSLTQTPTQVGTRQRVSALRKACLVRDHHRCVISRKFDIV EARKRSAEDRDNCKDDDGNLLSSEARGGFQYLEVAHILPHSLTTVAQGESELSESKTNVFRILDMFDPGLSHRLD GANIDRPVNALTLTLEYHRLFGEFQIYFEPTGRPHEYKIESLEDSPFLRDPLFPVTRTLSLSPNRTIDPPDSRLL RVHCAIAHIMKLSGAAEHIESVLRDMEEVDVKADGSTNLGYMMGLRLNGWVNTLSVF* |
Coding | >Ani_SJS100_1|g11648.t1 ATGCGTTGTCCAGGCCCACCCTGTCGCCATGATGGCCAGTATTGCTGGCAAGACCCTTTGGGAAAAAAGCATTAC AAATTGAAAACCCATCATCTGAGGAGTCTGGTCAAGTTCGTCGAGAATGGTGGCGAATTAGAGACACACGAAGAC GTTCCAGACGATATTCGTCAGCAGTTGTACGGCGAGGAGGAACAACGCCTTGAGAAACAGAAGAAAGGGGGCCAG AACGCACAGGGTGGGACAATGTGGCCGCCAATCAATATTAATGTCCTCCCGTCACAGTCATCTCATCCCTCGCAG ATGTACAGTAACGCGTCTCCGAGTGTCACTTGTGGGCCTATTGATATACCGGGCCCGCTTGACACAGCGATCGAT GAGTACACGGCTTGGCAAAAATCCCGTGTGAGTCGTGATTCTTTCAAGGAGCAGATGGACATAGCCCGCAATGTG GCATTGGAGAACTGTCTGGATCTGAGACAGATCCATAAGGATCAGGACTCAGGGTTTTTCGTCAGCCAAGGCGTG AAAGTTGGTGCTGCTCGCCGATTTGTTACATTGTCCTTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGT GTCTCTGCCTTACGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATATCCCGCAAGTTTGATATCGTC GAAGCCAGGAAGCGCAGCGCAGAGGATAGGGATAACTGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCA CGGGGCGGATTCCAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAACAGTGGCACAGGGAGAGTCA GAGCTGAGCGAGTCAAAAACGAATGTGTTCCGTATACTTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGAT GGAGCGAATATCGATAGACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATCGACTATTTGGTGAATTTCAA ATCTATTTCGAACCCACAGGGAGACCACATGAGTATAAGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGAT CCGTTATTTCCCGTCACTCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATCCACCAGACTCCAGACTTCTC CGTGTCCACTGTGCCATTGCACATATTATGAAACTCAGCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGAC ATGGAAGAGGTGGACGTTAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGGGTTTACGACTCAACGGTTGG GTAAACACTTTGTCAGTGTTTTAA |
Transcript | >Ani_SJS100_1|g11648.t1 ATGCGTTGTCCAGGCCCACCCTGTCGCCATGATGGCCAGTATTGCTGGCAAGACCCTTTGGGAAAAAAGCATTAC AAATTGAAAACCCATCATCTGAGGAGTCTGGTCAAGTTCGTCGAGAATGGTGGCGAATTAGAGACACACGAAGAC GTTCCAGACGATATTCGTCAGCAGTTGTACGGCGAGGAGGAACAACGCCTTGAGAAACAGAAGAAAGGGGGCCAG AACGCACAGGGTGGGACAATGTGGCCGCCAATCAATATTAATGTCCTCCCGTCACAGTCATCTCATCCCTCGCAG ATGTACAGTAACGCGTCTCCGAGTGTCACTTGTGGGCCTATTGATATACCGGGCCCGCTTGACACAGCGATCGAT GAGTACACGGCTTGGCAAAAATCCCGTGTGAGTCGTGATTCTTTCAAGGAGCAGATGGACATAGCCCGCAATGTG GCATTGGAGAACTGTCTGGATCTGAGACAGATCCATAAGGATCAGGACTCAGGGTTTTTCGTCAGCCAAGGCGTG AAAGTTGGTGCTGCTCGCCGATTTGTTACATTGTCCTTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGT GTCTCTGCCTTACGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATATCCCGCAAGTTTGATATCGTC GAAGCCAGGAAGCGCAGCGCAGAGGATAGGGATAACTGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCA CGGGGCGGATTCCAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAACAGTGGCACAGGGAGAGTCA GAGCTGAGCGAGTCAAAAACGAATGTGTTCCGTATACTTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGAT GGAGCGAATATCGATAGACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATCGACTATTTGGTGAATTTCAA ATCTATTTCGAACCCACAGGGAGACCACATGAGTATAAGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGAT CCGTTATTTCCCGTCACTCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATCCACCAGACTCCAGACTTCTC CGTGTCCACTGTGCCATTGCACATATTATGAAACTCAGCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGAC ATGGAAGAGGTGGACGTTAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGGGTTTACGACTCAACGGTTGG GTAAACACTTTGTCAGTGTTTTAA |
Gene | >Ani_SJS100_1|g11648.t1 ATGCGTTGTCCAGGCCCACCCTGTCGCCATGATGGCCAGTATTGCTGGCAAGACCCTTTGGGAAAAAAGCATTAC AAATTGAAAACCCATCATCTGAGGAGTCTGGTCAAGTTCGTCGAGAATGGTGGCGAATTAGAGACACACGAAGAC GTTCCAGACGATATTCGTCAGCAGTTGTACGGCGAGGAGGAACAACGCCTTGAGAAACAGAAGAAAGGGGGCCAG AACGCACAGGGTGGGACAATGTGGCCGCCAATCAATATTAATGTCCTCCCGTCACAGTCATCTCATCCCTCGCAG ATGTACAGTAACGCGTCTCCGAGTGTCACTTGTGGGCCTATTGATATACCGGGCCCGCTTGACACAGCGATCGAT GAGTACACGGCTTGGCAAAAATCCCGTGTGAGTCGTGATTCTTTCAAGGAGCAGATGGACATAGCCCGCAATGTG GCATTGGAGAACTGTCTGGATCTGAGACAGATCCATAAGGATCAGGACTCAGGGTTTTTCGTCAGCCAAGGCGTG AAAGTTGGTGCTGCTCGCCGATTTGTTAGTGAGATCAGAAGCTGGCTTGAAGAACGTGGGAATAGAAGAGACTCT GAAGATAGCCTGGACTAATGTTCATATGGCGCCACTTGTACCCGTATAAAGTGGTTGGCTTTGCTTCTTCTGATT ACATAACTGCTCAACCGCCTTTCCAGAAACGTCATTTAGTTAGTTACTCTTCATGGAAAATGATTAGATCATCGG AGACTGCGGATCAATATAATTCCGGAACGACCCGTAGTCTCGCTTCACACGTGATAGCGTCCTGATATAACGATT AGTCAATCCCCTTGTGACTCTGTTCTTATCGTAACCTACCGTCATGGCCCAGCATCGACATCAGTCATCCTTAGA ATCTGTGTTGGATTTCTCTCCTACACTTCTCTTAACACCTCAACAAAAACAAAAGGCTCATGCACTCCTGCATCT CTTCATTCAGGATTATGGCCTCAGCCAAACCGTACAGAGGGGTTACAGACCCGCAAAACTCATTTTGGAGATGTT TGACCGGGTAATTTCCAAAGACGCCTTTATAAGACTCTTCTTTTTATATATTTATGAGAGCCTTAAAGCTACCGG TGAAACTGCTGATAACGATATGGCTACTGCCCTGTCTTACCTTGACTCCTTCGCTGAAGACGGAAGTATGGATCC AAGCAAATCGATGCGTATAAAGAGCGCTCTTGAAAGTTTTGCTGAGTATATCGTCGACAATTTCCTTCTCCCACG TATGATTACCCCCTGTCCTTTACGATTATTTGCTAATGAGGCCAATTAGTTAGGGCTTCATCAGTTAAAACACCA CAAGCAACACCTACAGCATTGTCCTTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGTGTCTCTGCCTTA CGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATATCCCGCAAGTTTGATATCGTCGAAGCCAGGAAG CGCAGCGCAGAGGATAGGGATAACTGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCACGGGGCGGATTC CAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAACAGTGGCACAGGGAGAGTCAGAGCTGGTGCGT TATCGCCGACAATTGTCCATTAGCTGCGTACTAACCTTCCCAAGAGCGAGTCAAAAACGAATGTGTTCCGTATAC TTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGAGCGAATATCGATAGACCTGTTAATGCTCTTACGC TGACGCTTGAATATCATCGACTATTTGGTGAATTTCAAATCTATTTCGAACCCACAGGGAGACCACATGAGTATA AGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGATCCGTTATTTCCCGTCACTCGTACTCTGAGCCTTAGTC CCAACCGAACAATCGATCCACCAGACTCCAGACTTCTCCGTGTCCACTGTGCCATTGCACATATTATGAAACTCA GCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGACATGGAAGAGGTGGACGTTAAAGCTGATGGCTCAACAA ATTTAGGTTATATGATGGGTTTACGACTCAACGGTTGGGTAAACACTTTGTCAGTGTTTTAA |