Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g11615.t1
Gene name
Location	scaffold_297:3657..4348
Strand	-
Gene length (bp)	691
Transcript length (bp)	627
Coding sequence length (bp)	627
Protein length (aa)	209

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	3.2E-07	105	142
PF13921	Myb_DNA-bind_6	Myb-like DNA-binding domain	2.3E-05	109	149

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 42	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g11615.t1 MLPKSTGSRYPTRSNVATGPSITAATTPPGVSCLLSDPAQATPPSAVDSMDSNSVDPEAAPTDKNNNEADSAGDP SIRRASGRAKLNSLARAFPKPPGQGPPTAWALDEDAIVIAMHDHGERWEQISQHLPGRTPKACECRYAFLRHRPE WNESWKNSIAYWYQQYKSELWAHVSEKTRLPERDIEALVWHLGPWEIARRAAAAQHIA*
Coding	>Ani_SJS100_1\|g11615.t1 ATGCTCCCGAAAAGCACAGGCAGCCGCTACCCCACAAGATCGAATGTGGCAACAGGGCCTTCGATCACTGCTGCT ACCACCCCCCCAGGAGTGTCGTGCCTGTTGAGCGACCCCGCCCAAGCGACCCCGCCTAGTGCAGTGGACAGCATG GACTCGAACAGCGTCGATCCTGAAGCTGCCCCGACTGACAAAAACAACAATGAGGCGGACTCTGCAGGAGATCCA TCCATCAGGCGAGCCAGTGGACGGGCAAAGCTGAATAGCTTGGCTCGGGCATTCCCAAAACCTCCCGGCCAGGGG CCACCAACAGCTTGGGCCCTGGATGAGGATGCCATTGTCATTGCCATGCACGATCATGGGGAGAGGTGGGAACAG ATTAGTCAGCACTTACCTGGCCGTACTCCCAAGGCATGCGAATGCCGGTACGCCTTCCTCCGACACCGGCCTGAG TGGAACGAGAGCTGGAAGAACAGCATAGCGTACTGGTATCAGCAATACAAGTCGGAGCTTTGGGCTCACGTAAGC GAGAAAACACGTCTTCCCGAGCGCGATATCGAAGCCCTGGTGTGGCACCTTGGACCATGGGAGATCGCGCGCCGC GCAGCAGCTGCACAACACATAGCTTGA
Transcript	>Ani_SJS100_1\|g11615.t1 ATGCTCCCGAAAAGCACAGGCAGCCGCTACCCCACAAGATCGAATGTGGCAACAGGGCCTTCGATCACTGCTGCT ACCACCCCCCCAGGAGTGTCGTGCCTGTTGAGCGACCCCGCCCAAGCGACCCCGCCTAGTGCAGTGGACAGCATG GACTCGAACAGCGTCGATCCTGAAGCTGCCCCGACTGACAAAAACAACAATGAGGCGGACTCTGCAGGAGATCCA TCCATCAGGCGAGCCAGTGGACGGGCAAAGCTGAATAGCTTGGCTCGGGCATTCCCAAAACCTCCCGGCCAGGGG CCACCAACAGCTTGGGCCCTGGATGAGGATGCCATTGTCATTGCCATGCACGATCATGGGGAGAGGTGGGAACAG ATTAGTCAGCACTTACCTGGCCGTACTCCCAAGGCATGCGAATGCCGGTACGCCTTCCTCCGACACCGGCCTGAG TGGAACGAGAGCTGGAAGAACAGCATAGCGTACTGGTATCAGCAATACAAGTCGGAGCTTTGGGCTCACGTAAGC GAGAAAACACGTCTTCCCGAGCGCGATATCGAAGCCCTGGTGTGGCACCTTGGACCATGGGAGATCGCGCGCCGC GCAGCAGCTGCACAACACATAGCTTGA
Gene	>Ani_SJS100_1\|g11615.t1 ATGCTCCCGAAAAGCACAGGCAGCCGCTACCCCACAAGATCGAATGTGGCAACAGGGCCTTCGATCACTGCTGCT ACCACCCCCCCAGGAGTGTCGTGCCTGTTGAGCGACCCCGCCCAAGCGACCCCGCCTAGTGCAGTGGACAGCATG GACTCGAACAGCGTCGATCCTGAAGCTGCCCCGACTGACAAAAACAACAATGAGGCGGACTCTGCAGGAGATCCA TCCATCAGGCGAGCCAGTGGACGGGCAAAGCTGAATAGCTTGGCTCGGGCATTCCCAAAACCTCCCGGCCAGGGG CCACCAACAGCTTGGGCCCTGGATGAGGATGCCATTGTCATTGCCATGCACGATCATGGGGAGAGGTGGGAACAG ATTAGTCAGCACTTACCTGGCCGTACTCCCAAGGCATGCGAATGCCGGTACGCCTTCCTCCGACACCGGCCTGAG TGGAACGAGAGCTGGAAGAACAGCATAGCGTACTGGTATCAGCAGTGCGTGACCCGTCATTCCCCAGATGCGGTT GACTTGGCGAGCTGATCCTCGTGCCTTGTACAGATACAAGTCGGAGCTTTGGGCTCACGTAAGCGAGAAAACACG TCTTCCCGAGCGCGATATCGAAGCCCTGGTGTGGCACCTTGGACCATGGGAGATCGCGCGCCGCGCAGCAGCTGC ACAACACATAGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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