Protein ID | Ani_SJS100_1|g11590.t1 |
Gene name | |
Location | scaffold_285:6070..7876 |
Strand | + |
Gene length (bp) | 1806 |
Transcript length (bp) | 1749 |
Coding sequence length (bp) | 1749 |
Protein length (aa) | 583 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03441 | FAD_binding_7 | FAD binding domain of DNA photolyase | 1.2E-75 | 381 | 576 |
PF00875 | DNA_photolyase | DNA photolyase | 2.9E-37 | 94 | 258 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11590.t1 MPPQKRKASSSSATNGASSHTNKREKPDLTRQHPHAKDTEDFGIVLRDFYPPEMCNERCKAYNNGTLERPIESLH RAYEDTLDERQKIRPNAVVVHWFKTDLRLHDNRGLQMAYQVAREHKLPLIGLYILSPEDLTAHLSSAPRVDLTLR TLESLRRDLSELDIPLYMETQEKRNDIPQRIIDLCQEWGATHLFANLEYEVDELRREAKLVRLCARNGIRFEAAH DTCVVTPGKLVSQQGKQYAVYSPWFRAWCAFLNENPEYLEVADEPGSNPGDARKHFKTLFDCEVPVAPENKRLSE EERTRFRELYPEGEHEANRRLEAFLEEKANDYDDLRNTLAGRNTSVLSPYLASGSLSARTAVLQAKNEGHLNRNQ TGYTSWISEVDWRDFSKHVLVHWPFICMNKCFKPEFTNLAWSYNKDHFNAWCEGKTGYPIVDAAMRQIKHAAWMH NRTRMVVSSILSKDLLTDWRRGERYFMENLIDGDFASNHGGWGFGSSTGVDPQPYFRIFNPLRQSERFDPEGEYI RHWVPELRAIEGAAVHDPYGRGAGDIAERNGYPMPIVDHSESRDRALENYKKVAQGR* |
Coding | >Ani_SJS100_1|g11590.t1 ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGCCTCGTCGCACACCAATAAACGCGAA AAGCCCGATCTTACGCGTCAACATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC CCCCCTGAGATGTGCAACGAACGGTGCAAGGCGTACAATAACGGAACGCTGGAACGACCCATCGAATCCCTACAT AGGGCATACGAAGACACGTTGGATGAACGTCAGAAAATCCGGCCCAATGCAGTCGTCGTTCACTGGTTCAAAACA GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGCGCGAGAACACAAACTGCCTCTCATC GGCTTGTATATTCTCTCTCCGGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGACGTTGCGA ACACTAGAATCGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTATATGGAAACGCAGGAGAAGAGGAAT GATATTCCTCAAAGGATTATAGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAATGGCATACGATTTGAAGCCGCACAT GATACATGCGTTGTCACTCCGGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCAGTTTATAGTCCGTGGTTT CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGCGGACGAACCAGGGTCGAACCCCGGT GATGCACGCAAGCACTTCAAGACCCTCTTTGACTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG GAGGAAAGGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGCAAACCGTAGGCTGGAGGCGTTTCTG GAGGAGAAAGCAAATGACTATGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT CTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTACAGGCAAAGAACGAAGGCCACTTAAATAGGAATCAG ACCGGATATACGTCTTGGATTAGCGAAGTTGACTGGCGAGATTTCTCAAAGCATGTCCTGGTCCATTGGCCATTT ATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCC TGGTGCGAGGGCAAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCGCCTGGATGCAC AATCGCACGCGCATGGTCGTTTCATCAATTCTTTCCAAAGACCTTCTGACAGATTGGCGTAGAGGGGAGCGATAT TTCATGGAAAACTTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACCGGGGTT GATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGCCAGAGTGAGCGGTTCGATCCAGAAGGGGAGTATATT CGTCATTGGGTGCCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCCGGGGAT ATTGCTGAGAGGAATGGCTATCCTATGCCGATAGTTGATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTAC AAAAAGGTAGCCCAGGGCCGTTGA |
Transcript | >Ani_SJS100_1|g11590.t1 ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGCCTCGTCGCACACCAATAAACGCGAA AAGCCCGATCTTACGCGTCAACATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC CCCCCTGAGATGTGCAACGAACGGTGCAAGGCGTACAATAACGGAACGCTGGAACGACCCATCGAATCCCTACAT AGGGCATACGAAGACACGTTGGATGAACGTCAGAAAATCCGGCCCAATGCAGTCGTCGTTCACTGGTTCAAAACA GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGCGCGAGAACACAAACTGCCTCTCATC GGCTTGTATATTCTCTCTCCGGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGACGTTGCGA ACACTAGAATCGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTATATGGAAACGCAGGAGAAGAGGAAT GATATTCCTCAAAGGATTATAGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAATGGCATACGATTTGAAGCCGCACAT GATACATGCGTTGTCACTCCGGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCAGTTTATAGTCCGTGGTTT CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGCGGACGAACCAGGGTCGAACCCCGGT GATGCACGCAAGCACTTCAAGACCCTCTTTGACTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG GAGGAAAGGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGCAAACCGTAGGCTGGAGGCGTTTCTG GAGGAGAAAGCAAATGACTATGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT CTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTACAGGCAAAGAACGAAGGCCACTTAAATAGGAATCAG ACCGGATATACGTCTTGGATTAGCGAAGTTGACTGGCGAGATTTCTCAAAGCATGTCCTGGTCCATTGGCCATTT ATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCC TGGTGCGAGGGCAAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCGCCTGGATGCAC AATCGCACGCGCATGGTCGTTTCATCAATTCTTTCCAAAGACCTTCTGACAGATTGGCGTAGAGGGGAGCGATAT TTCATGGAAAACTTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACCGGGGTT GATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGCCAGAGTGAGCGGTTCGATCCAGAAGGGGAGTATATT CGTCATTGGGTGCCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCCGGGGAT ATTGCTGAGAGGAATGGCTATCCTATGCCGATAGTTGATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTAC AAAAAGGTAGCCCAGGGCCGTTGA |
Gene | >Ani_SJS100_1|g11590.t1 ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGCCTCGTCGCACACCAATAAACGCGAA AAGCCCGATCTTACGCGTCAACATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC CCCCCTGAGATGTGCAACGAACGGTGCAAGGCGTACAATAACGGAACGCTGGAACGACCCATCGAATCCCTACAT AGGGCATACGAAGACACGTTGGATGAACGTCAGAAAATCCGGCCCAATGCAGTCGTCGTTCACTGGTTCAAAACA GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGCGCGAGAACACAAACTGCCTCTCATC GGCTTGTATATTCTCTCTCCGGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGACGTTGCGA ACACTAGAATCGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTATATGGAAACGCAGGAGAAGAGGAAT GATATTCCTCAAAGGATTATAGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAATGGCATACGATTTGAAGCCGCACAT GATACATGCGTTGTCACTCCGGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCAGTTTATAGTCCGTGGTTT CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGCGGACGAACCAGGGTCGAACCCCGGT GATGCACGCAAGCACTTCAAGACCCTCTTTGACTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG GAGGAAAGGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGCAAACCGTAGGCTGGAGGCGTTTCTG GAGGAGAAAGCAAATGACTATGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT CTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTACAGGCAAAGAACGAAGGCCACTTAAATAGGAATCAG ACCGGATATACGTCTTGGATTAGCGAAGTTGACTGGCGAGATTTCTCAAAGCATGTCCTGGTCCATTGGCCATTT ATCTGGTTCGTTTTCTCCATTTTGACTGACTATCCGTATAAAGCTGACCAGTCATCATACAGTATGAACAAGTGC TTCAAACCTGAGTTCACAAACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAAAACT GGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCGCCTGGATGCACAATCGCACGCGCATGGTC GTTTCATCAATTCTTTCCAAAGACCTTCTGACAGATTGGCGTAGAGGGGAGCGATATTTCATGGAAAACTTGATA GACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACCGGGGTTGATCCCCAACCATATTTC CGGATCTTTAATCCTCTGCGCCAGAGTGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCATTGGGTGCCGGAG CTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCCGGGGATATTGCTGAGAGGAATGGC TATCCTATGCCGATAGTTGATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTACAAAAAGGTAGCCCAGGGC CGTTGA |