Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11587.t1
Gene name
Locationscaffold_285:742..1166
Strand-
Gene length (bp)424
Transcript length (bp)357
Coding sequence length (bp)357
Protein length (aa) 119

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 5.9E-20 9 67

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11587.t1
MAKEKQLSAQQISQHKTPDDCWIVVDNQVWDVTDFLEEHPGGSSSILKYAGRDATKAYSDVHAPSVIKTQLHPER
NMGVLDEATISDDWVKQPPTENPPLLLENEKPPLHTLINSHDF*
Coding >Ani_SJS100_1|g11587.t1
ATGGCGAAAGAGAAGCAGTTGTCTGCACAGCAGATCTCTCAACACAAGACGCCCGACGATTGTTGGATTGTGGTC
GACAATCAGGTATGGGATGTGACGGACTTCTTGGAAGAGCATCCGGGTGGATCTTCAAGTATCCTCAAGTACGCG
GGACGTGATGCCACCAAAGCATACTCCGATGTCCATGCTCCGAGCGTCATCAAAACACAGCTACATCCAGAGCGA
AATATGGGAGTGTTGGATGAAGCGACAATCAGCGATGATTGGGTGAAGCAGCCGCCCACTGAGAATCCGCCTCTG
CTCCTAGAGAATGAGAAGCCACCCCTACACACCCTGATAAACTCCCACGACTTTTGA
Transcript >Ani_SJS100_1|g11587.t1
ATGGCGAAAGAGAAGCAGTTGTCTGCACAGCAGATCTCTCAACACAAGACGCCCGACGATTGTTGGATTGTGGTC
GACAATCAGGTATGGGATGTGACGGACTTCTTGGAAGAGCATCCGGGTGGATCTTCAAGTATCCTCAAGTACGCG
GGACGTGATGCCACCAAAGCATACTCCGATGTCCATGCTCCGAGCGTCATCAAAACACAGCTACATCCAGAGCGA
AATATGGGAGTGTTGGATGAAGCGACAATCAGCGATGATTGGGTGAAGCAGCCGCCCACTGAGAATCCGCCTCTG
CTCCTAGAGAATGAGAAGCCACCCCTACACACCCTGATAAACTCCCACGACTTTTGA
Gene >Ani_SJS100_1|g11587.t1
ATGGCGAAAGAGAAGCAGTTGTCTGCACAGCAGATCTCTCAACACAAGACGCCCGACGATTGTTGGATTGTGGTC
GACAATCAGGTATGGGATGTGACGGACTTCTTGGAAGAGCATCCGGGTGGATCTTCAAGTAAGATTGCAGCGCTA
AATCTCCTAATACTCTTCTAGAACAATATATACTGACACGTTCTTCTAAGGTATCCTCAAGTACGCGGGACGTGA
TGCCACCAAAGCATACTCCGATGTCCATGCTCCGAGCGTCATCAAAACACAGCTACATCCAGAGCGAAATATGGG
AGTGTTGGATGAAGCGACAATCAGCGATGATTGGGTGAAGCAGCCGCCCACTGAGAATCCGCCTCTGCTCCTAGA
GAATGAGAAGCCACCCCTACACACCCTGATAAACTCCCACGACTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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