Protein ID | Ani_SJS100_1|g11549.t1 |
Gene name | |
Location | scaffold_268:8302..10221 |
Strand | - |
Gene length (bp) | 1919 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 55 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 39 | 19 |
2 | 77 | 99 | 22 |
3 | 109 | 131 | 22 |
4 | 143 | 162 | 19 |
5 | 172 | 194 | 22 |
6 | 201 | 220 | 19 |
7 | 230 | 252 | 22 |
8 | 350 | 372 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11549.t1 MSPTLSDLYKRATQIQYVDWYGIWIAALLGAWLLTRLAYQLGRWTVQRHIAASLGRRLGRELPWLAQTIDISTAF EVILVGVLLGANIVLLLVSVHGWADVQQRAAKLAVLNLLPLGTGLTFGLPAHLLGISRSTVAWSHRWFARVMAAH SLLHGAIAIARAGKPTPSMRHDWVALLAAAAILMMIPVTLHAVVRRHCQVAMKIHYLLTVTAMVALAYHTWDQGS ESRWQVVGAGALWIVLTAVAVSHAVFVQQRWNAGRPALSIRPFHELLRMDITVSPHWHIRPGQYVYLWLPHAGFR SCFQLLPFYIAYWDDPPGPRILYVLTRPRASSLSARLYLRECLHQRRQPALLLGPYGRSIDFSLFGTIVFIVEDI GMLRVLPYIRMLVQASEQRRAMVRKLKIVWQMQDFDHQCWLGDWMQDLLDLDRGEFKILEFRLYYLTKGTSVNPG DGFGERIKLRQGPMVAREVVQGHLSKRRGELAVGVCARQSIRQQVRDAVQPQTGADIKLFDFDLEPCHTSAAPCR DNEGVTNLAQSDYQK* |
Coding | >Ani_SJS100_1|g11549.t1 ATGTCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGCCTGGCTTCTCACGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC GCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTCGCCCAGACCATTGACATATCCACCGCATTC GAGGTCATTTTGGTCGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGTCCATGGCTGGGCTGAT GTCCAGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTATTGCCGCTCGGTACGGGCCTGACCTTTGGCCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTACCGTTGCGTGGTCGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGGTAAGCCGACCCCCTCGATGAGGCATGACTGGGTTGCC TTACTGGCAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGCGGTCGTCCGGCGGCACTGTCAGGTC GCCATGAAAATCCACTACCTTCTGACGGTCACGGCAATGGTGGCTCTGGCGTATCATACGTGGGACCAAGGATCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATCGTGCTGACTGCCGTTGCCGTCTCTCATGCAGTT TTCGTCCAACAACGCTGGAATGCGGGACGGCCCGCCCTAAGCATACGTCCCTTTCATGAGCTGCTTCGCATGGAC ATTACAGTGTCCCCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCGC TCGTGCTTCCAACTCCTGCCCTTCTATATTGCCTACTGGGATGACCCGCCCGGACCGCGCATTCTGTACGTTCTG ACCCGACCGCGAGCCTCCAGCCTCAGTGCGCGACTCTACCTCCGCGAATGTCTACACCAGCGTCGACAGCCCGCG CTGTTGCTGGGGCCATACGGCCGATCGATCGACTTCTCTCTGTTTGGGACGATCGTGTTCATTGTAGAGGACATT GGCATGTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGCGGGCCATGGTACGCAAG CTGAAAATCGTGTGGCAGATGCAAGACTTTGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTGTTGGAC CTCGACCGCGGTGAATTTAAGATTCTTGAATTTCGTCTGTATTACCTTACAAAGGGGACTTCCGTTAACCCTGGT GACGGGTTCGGCGAACGAATTAAGCTGCGTCAAGGGCCAATGGTGGCCAGGGAAGTCGTCCAAGGTCACCTGAGC AAGCGTCGTGGGGAGCTAGCCGTCGGCGTGTGCGCCCGTCAATCGATTCGTCAACAAGTCCGGGATGCAGTTCAG CCACAGACGGGGGCAGACATCAAACTTTTCGACTTCGACCTCGAGCCGTGTCACACCTCGGCGGCCCCTTGTCGC GACAACGAAGGCGTCACTAATCTTGCGCAAAGTGATTATCAAAAGTGA |
Transcript | >Ani_SJS100_1|g11549.t1 ATGTCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGCCTGGCTTCTCACGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC GCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTCGCCCAGACCATTGACATATCCACCGCATTC GAGGTCATTTTGGTCGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGTCCATGGCTGGGCTGAT GTCCAGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTATTGCCGCTCGGTACGGGCCTGACCTTTGGCCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTACCGTTGCGTGGTCGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGGTAAGCCGACCCCCTCGATGAGGCATGACTGGGTTGCC TTACTGGCAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGCGGTCGTCCGGCGGCACTGTCAGGTC GCCATGAAAATCCACTACCTTCTGACGGTCACGGCAATGGTGGCTCTGGCGTATCATACGTGGGACCAAGGATCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATCGTGCTGACTGCCGTTGCCGTCTCTCATGCAGTT TTCGTCCAACAACGCTGGAATGCGGGACGGCCCGCCCTAAGCATACGTCCCTTTCATGAGCTGCTTCGCATGGAC ATTACAGTGTCCCCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCGC TCGTGCTTCCAACTCCTGCCCTTCTATATTGCCTACTGGGATGACCCGCCCGGACCGCGCATTCTGTACGTTCTG ACCCGACCGCGAGCCTCCAGCCTCAGTGCGCGACTCTACCTCCGCGAATGTCTACACCAGCGTCGACAGCCCGCG CTGTTGCTGGGGCCATACGGCCGATCGATCGACTTCTCTCTGTTTGGGACGATCGTGTTCATTGTAGAGGACATT GGCATGTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGCGGGCCATGGTACGCAAG CTGAAAATCGTGTGGCAGATGCAAGACTTTGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTGTTGGAC CTCGACCGCGGTGAATTTAAGATTCTTGAATTTCGTCTGTATTACCTTACAAAGGGGACTTCCGTTAACCCTGGT GACGGGTTCGGCGAACGAATTAAGCTGCGTCAAGGGCCAATGGTGGCCAGGGAAGTCGTCCAAGGTCACCTGAGC AAGCGTCGTGGGGAGCTAGCCGTCGGCGTGTGCGCCCGTCAATCGATTCGTCAACAAGTCCGGGATGCAGTTCAG CCACAGACGGGGGCAGACATCAAACTTTTCGACTTCGACCTCGAGCCGTGTCACACCTCGGCGGCCCCTTGTCGC GACAACGAAGGCGTCACTAATCTTGCGCAAAGTGATTATCAAAAGTGA |
Gene | >Ani_SJS100_1|g11549.t1 ATGTCTCCAACCCTCTCAGACCTGTATAAACGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGCCTGGCTTCTCACGCGGTTGGCGTACCAGCTTGGTCGGTGGACTGTCCAACGCCACATC GCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTCGCCCAGACCATTGACATATCCACCGCATTC GAGGTCATTTTGGTCGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGTCCATGGCTGGGCTGAT GTCCAGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTATTGCCGCTCGGTACGGGCCTGACCTTTGGCCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTACCGTTGCGTGGTCGCATCGCTGGTTTGCGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGGTAAGCCGACCCCCTCGATGAGGCATGACTGGGTTGCC TTACTGGTCAGTCACCACACCGCCCCTCGATGATGATGATGACTGTGATCCGAGAGCCATACATACCACTAACCA GGGTTAGGCAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGCGGTCGTCCGGCGGCACTGTCAGGT CGCCATGAAAATCCACTACCTTCTGACGGTCACGGCAATGGTGGCTCTGGCGTATCATACGTGGGACCAAGGATC AGAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATCGTGCTGACTGCCGTTGCCGTCTCTCATGCAGT TTTCGTCCAACAACGCTGGAATGCGGGACGGCCCGCCCTAAGCATACGTCCCTTTCATGAGCTGCTTCGCATGGA CATTACAGTGTCCCCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCGGGATTTCG CTCGTGCTTCCAACTCCTGCCCTTCTATATTGCCTACTGGGATGACCCGCCCGGACCGCGCATTCTGTACGTTCT GACCCGACCGCGAGCCTCCAGCCTCAGTGCGCGACTCTACCTCCGCGAATGTCTACACCAGCGTCGACAGCCCGC GCTGTTGCTGGGGCCATACGGCCGATCGATCGACTTCTCTCTGTTTGGGACGATCGTGTTCATTGTAGAGGACAT TGGCATGTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGCGGGCCATGGTACGCAA GCTGAAAATCGTGTGGCAGATGCAAGACTTTGGTATGGCTGTCTCTTGATGCACTGCCCGATACCGCAGTTACTG ACAAATCCTAGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTGTTGGACCTCGACCGCGGTGAATTTAA GGTATGTGACAACCCTCTACGGCCAGCCTTAATGCCGTCCTGACTGAGATAGATTCTTGAATTTCGTCTGTATTA CCTTACAAAGGGGACTTCCGTTAACCCTGGTGACGGGTTCGGCGAACGAATTAAGCTGCGTCAAGGGCCAATGGT GGCCAGGGAAGTCGTCCAAGGTCACCTGAGCAAGCGTCGTGGGGAGCTAGCCGTCGGCGGTAGGTGTGATTCCCT CCGATCGATATACGCGTGAACCTACAACCAATGTGAGAGGGGGAATTATAACAGGCCGCGTCGAACATGCACCCA AAGTCTAATGATTGTCTACCATAGTGTGCGCCCGTCAATCGATTCGTCAACAAGTCCGGGATGCAGTTCAGCCAC AGACGGGGGCAGACATCAAACTTTTCGACTTCGACCTCGAGCCGTGTCACACCTCGGCGGCCCCTTGTCGCGACA ACGAAGGCGTCACTAATCTTGCGCAAAGTGATTATCAAAAGTGA |