Protein ID | Ani_SJS100_1|g11546.t1 |
Gene name | |
Location | scaffold_267:480..3086 |
Strand | - |
Gene length (bp) | 2606 |
Transcript length (bp) | 2292 |
Coding sequence length (bp) | 2292 |
Protein length (aa) | 764 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04516 | CP2 | CP2 transcription factor | 2.5E-93 | 193 | 439 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
CP2 |
Type of sequence | Sequence |
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Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11546.t1 MMFRNRKNSQKPDDELIQRFQKTFSDVVPPVTHRNATRFGQMPIGPITPARLSMNNDLKLNDPTPRATEDMRFAA PFVDPNAVSYVNPLQPHGYYTPNSGGLGAVYHSQAGDLHTPGMGMSMITPLSLPQQISAATINPGTAALGLDHFD QQYIPPHFHNPQPFAQQPAFAPGAFVQSDAGYDAMDDSVEELSLNDVDMQGNASSHYVTSTIQDDQASIQNPGET FRYHVTLRAPTAMINHQAEIPVTYLNKGQAYSVSVIDSTPPPMTTQPIKYRTFIRVSFQEDEQRAKPAACWQLWK EGRGSNEAHQRGGKLQAVEYVDPIQGGIEDTKNRQIQLESSSFDGFCVTWTLNPSTGVSECSIPVRFNFLSTDFS HSKGVKGIPVRLCAKTEMVSPDDTSSTSGKESEVCYCKVKLFRDHGAERKLSNDVAHVKKTIEKLRQQIAQAEMG AGNYGKRKRSNGSIALKGADPRPAKITKHKRTWSMGSQDGPGKMSLEDDLHAKLALMQDMFTSTRPVSILGLRGE EQDDPDLFPVMLPESREFLKRENSRGSRFSIDGASLHAVSPTSSSISINSPCHPTNLQSNIFYDSAYHGSLSTSR ENSRPCSEVLGDKATLKHPVKVPKVASTDGGAPMGFIDAVDIDPTYRPPAERPVKPIACFYVRFPRNDQRSDDYY RAVYLTERTVRDLMEKISMKQRIDPQRIVRVLHVKQNGLKIMVDDDVVRELPDGQDMVVEISEASSIETAAATGS GNLSSAVEVKLSY* |
Coding | >Ani_SJS100_1|g11546.t1 ATGATGTTCCGCAACAGAAAGAATTCCCAGAAGCCAGACGACGAGCTCATCCAGAGATTCCAAAAAACTTTCTCA GACGTTGTTCCCCCAGTCACTCACCGCAATGCCACGCGCTTCGGTCAGATGCCCATCGGACCTATCACTCCAGCT AGACTAAGTATGAATAACGACCTGAAGCTCAATGACCCTACACCCCGCGCCACAGAAGATATGCGGTTCGCAGCG CCTTTTGTCGATCCGAATGCTGTCTCTTATGTAAACCCACTGCAACCACATGGCTACTATACTCCCAACTCAGGT GGGCTGGGCGCAGTATACCACAGCCAAGCAGGAGATTTGCATACCCCTGGCATGGGTATGAGCATGATTACTCCG CTATCCCTCCCGCAGCAGATCTCCGCGGCCACCATCAACCCCGGCACTGCGGCTTTGGGCCTCGATCATTTCGAC CAGCAGTACATCCCGCCACACTTTCACAACCCCCAACCCTTTGCTCAGCAGCCAGCCTTTGCGCCCGGTGCTTTC GTTCAGAGCGATGCAGGTTACGATGCCATGGACGATTCTGTTGAAGAACTCTCTCTAAATGATGTGGACATGCAG GGTAATGCGTCTTCCCATTATGTTACATCAACAATCCAGGACGATCAAGCGAGCATCCAGAACCCAGGTGAAACG TTTCGCTATCATGTCACTTTGCGCGCTCCCACAGCCATGATTAACCACCAAGCCGAAATCCCAGTTACCTATCTC AATAAAGGCCAGGCGTACTCAGTATCTGTGATTGATTCTACTCCGCCGCCCATGACTACGCAACCGATCAAATAT CGTACCTTCATCCGTGTGTCATTCCAAGAAGATGAGCAGAGGGCAAAGCCGGCTGCTTGTTGGCAATTATGGAAG GAAGGTCGCGGTTCCAATGAAGCGCATCAACGAGGCGGCAAGCTCCAAGCAGTGGAATATGTCGATCCCATACAA GGCGGCATCGAAGACACGAAGAACCGGCAGATTCAGCTCGAGAGCTCGTCGTTCGATGGTTTTTGCGTCACGTGG ACACTCAACCCGTCAACTGGAGTTTCGGAATGCTCGATTCCTGTCCGATTCAACTTCTTGTCGACGGACTTTAGC CATTCCAAGGGTGTGAAGGGTATTCCGGTCAGATTGTGCGCAAAGACAGAGATGGTCTCCCCTGACGATACGAGC TCCACCTCGGGCAAAGAATCGGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGATCATGGTGCTGAGCGGAAA CTGTCCAACGATGTCGCTCATGTCAAGAAGACCATCGAGAAACTCCGACAACAGATCGCCCAAGCCGAGATGGGT GCGGGCAACTACGGAAAGCGCAAGCGTAGCAATGGCTCCATTGCTCTCAAGGGTGCCGATCCGCGCCCGGCCAAG ATCACCAAGCACAAACGGACATGGTCCATGGGCTCGCAGGACGGCCCTGGCAAGATGTCCTTGGAGGACGATCTC CATGCGAAGCTCGCGTTGATGCAAGACATGTTCACGTCAACACGACCGGTAAGCATTCTGGGATTGCGGGGTGAG GAGCAGGACGACCCGGACTTGTTCCCAGTCATGCTCCCCGAGTCGCGAGAATTCCTCAAGCGGGAAAACAGCCGT GGATCCCGCTTCAGTATTGATGGTGCATCCCTGCATGCCGTCTCGCCCACCAGCAGTAGCATCTCAATAAACTCA CCATGCCACCCGACCAACCTCCAGTCCAACATTTTCTATGACTCAGCGTACCATGGATCCTTGAGCACGTCTCGA GAGAACTCGCGCCCGTGCTCTGAAGTCCTGGGCGACAAGGCCACACTAAAGCATCCTGTCAAAGTACCGAAAGTG GCTTCAACTGACGGTGGCGCGCCAATGGGATTCATAGACGCGGTGGATATTGACCCAACTTACCGACCACCCGCG GAGCGTCCAGTCAAGCCAATCGCGTGCTTCTACGTACGGTTCCCACGCAACGATCAGCGTTCGGATGACTATTAC CGGGCCGTCTATCTGACTGAACGAACGGTTCGCGACTTGATGGAAAAGATTTCCATGAAGCAGCGCATCGACCCC CAGCGCATTGTGCGAGTCCTCCACGTCAAACAAAACGGCCTAAAAATAATGGTGGACGATGATGTTGTTCGTGAG CTTCCAGACGGCCAAGACATGGTTGTCGAGATCTCCGAGGCATCGTCAATCGAGACCGCAGCAGCTACGGGATCG GGAAACCTCAGTTCAGCCGTTGAGGTCAAATTGAGCTACTAA |
Transcript | >Ani_SJS100_1|g11546.t1 ATGATGTTCCGCAACAGAAAGAATTCCCAGAAGCCAGACGACGAGCTCATCCAGAGATTCCAAAAAACTTTCTCA GACGTTGTTCCCCCAGTCACTCACCGCAATGCCACGCGCTTCGGTCAGATGCCCATCGGACCTATCACTCCAGCT AGACTAAGTATGAATAACGACCTGAAGCTCAATGACCCTACACCCCGCGCCACAGAAGATATGCGGTTCGCAGCG CCTTTTGTCGATCCGAATGCTGTCTCTTATGTAAACCCACTGCAACCACATGGCTACTATACTCCCAACTCAGGT GGGCTGGGCGCAGTATACCACAGCCAAGCAGGAGATTTGCATACCCCTGGCATGGGTATGAGCATGATTACTCCG CTATCCCTCCCGCAGCAGATCTCCGCGGCCACCATCAACCCCGGCACTGCGGCTTTGGGCCTCGATCATTTCGAC CAGCAGTACATCCCGCCACACTTTCACAACCCCCAACCCTTTGCTCAGCAGCCAGCCTTTGCGCCCGGTGCTTTC GTTCAGAGCGATGCAGGTTACGATGCCATGGACGATTCTGTTGAAGAACTCTCTCTAAATGATGTGGACATGCAG GGTAATGCGTCTTCCCATTATGTTACATCAACAATCCAGGACGATCAAGCGAGCATCCAGAACCCAGGTGAAACG TTTCGCTATCATGTCACTTTGCGCGCTCCCACAGCCATGATTAACCACCAAGCCGAAATCCCAGTTACCTATCTC AATAAAGGCCAGGCGTACTCAGTATCTGTGATTGATTCTACTCCGCCGCCCATGACTACGCAACCGATCAAATAT CGTACCTTCATCCGTGTGTCATTCCAAGAAGATGAGCAGAGGGCAAAGCCGGCTGCTTGTTGGCAATTATGGAAG GAAGGTCGCGGTTCCAATGAAGCGCATCAACGAGGCGGCAAGCTCCAAGCAGTGGAATATGTCGATCCCATACAA GGCGGCATCGAAGACACGAAGAACCGGCAGATTCAGCTCGAGAGCTCGTCGTTCGATGGTTTTTGCGTCACGTGG ACACTCAACCCGTCAACTGGAGTTTCGGAATGCTCGATTCCTGTCCGATTCAACTTCTTGTCGACGGACTTTAGC CATTCCAAGGGTGTGAAGGGTATTCCGGTCAGATTGTGCGCAAAGACAGAGATGGTCTCCCCTGACGATACGAGC TCCACCTCGGGCAAAGAATCGGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGATCATGGTGCTGAGCGGAAA CTGTCCAACGATGTCGCTCATGTCAAGAAGACCATCGAGAAACTCCGACAACAGATCGCCCAAGCCGAGATGGGT GCGGGCAACTACGGAAAGCGCAAGCGTAGCAATGGCTCCATTGCTCTCAAGGGTGCCGATCCGCGCCCGGCCAAG ATCACCAAGCACAAACGGACATGGTCCATGGGCTCGCAGGACGGCCCTGGCAAGATGTCCTTGGAGGACGATCTC CATGCGAAGCTCGCGTTGATGCAAGACATGTTCACGTCAACACGACCGGTAAGCATTCTGGGATTGCGGGGTGAG GAGCAGGACGACCCGGACTTGTTCCCAGTCATGCTCCCCGAGTCGCGAGAATTCCTCAAGCGGGAAAACAGCCGT GGATCCCGCTTCAGTATTGATGGTGCATCCCTGCATGCCGTCTCGCCCACCAGCAGTAGCATCTCAATAAACTCA CCATGCCACCCGACCAACCTCCAGTCCAACATTTTCTATGACTCAGCGTACCATGGATCCTTGAGCACGTCTCGA GAGAACTCGCGCCCGTGCTCTGAAGTCCTGGGCGACAAGGCCACACTAAAGCATCCTGTCAAAGTACCGAAAGTG GCTTCAACTGACGGTGGCGCGCCAATGGGATTCATAGACGCGGTGGATATTGACCCAACTTACCGACCACCCGCG GAGCGTCCAGTCAAGCCAATCGCGTGCTTCTACGTACGGTTCCCACGCAACGATCAGCGTTCGGATGACTATTAC CGGGCCGTCTATCTGACTGAACGAACGGTTCGCGACTTGATGGAAAAGATTTCCATGAAGCAGCGCATCGACCCC CAGCGCATTGTGCGAGTCCTCCACGTCAAACAAAACGGCCTAAAAATAATGGTGGACGATGATGTTGTTCGTGAG CTTCCAGACGGCCAAGACATGGTTGTCGAGATCTCCGAGGCATCGTCAATCGAGACCGCAGCAGCTACGGGATCG GGAAACCTCAGTTCAGCCGTTGAGGTCAAATTGAGCTACTAA |
Gene | >Ani_SJS100_1|g11546.t1 ATGATGTTCCGCAACAGGTACGTTGCTATACTGGATACCGATGCGGCGCTTTACCGACGGGTCGCCGGCCATTCT CATGCTGACCGGACTACCACCCTTGCAGAAAGAATTCCCAGAAGCCAGACGACGAGCTCATCCAGAGATTCCAAA AAACTTTCTCAGACGTTGTTCCCCCAGTCACTCACCGCAATGCCACGCGCTTCGGTCAGATGCCCATCGGACCTA TCACTCCAGCTAGGTAAATATGCCTTCCATTTTCTGTCTTTGTCGTTTCTTTTCTCATCCTTGTTTGGGTTGATT TGAAGCTCGGAAAATATCTTTGGGCGAGAGCTAACATGATAATTCTGCGCCAGACTAAGTATGAATAACGACCTG AAGCTCAATGACCCTACACCCCGCGCCACAGAAGATATGCGGTTCGCAGCGCCTTTTGTCGATCCGAATGCTGTC TCTTATGTAAACCCACTGCAACCACATGGCTACTATACTCCCAACTCAGGTGGGCTGGGCGCAGTATACCACAGC CAAGCAGGAGATTTGCATACCCCTGGCATGGGTATGAGCATGATTACTCCGCTATCCCTCCCGCAGCAGATCTCC GCGGCCACCATCAACCCCGGCACTGCGGCTTTGGGCCTCGATCATTTCGACCAGCAGTACATCCCGCCACACTTT CACAACCCCCAACCCTTTGCTCAGCAGCCAGCCTTTGCGCCCGGTGCTTTCGTTCAGAGCGATGCAGGTTACGAT GCCATGGACGATTCTGTTGAAGAACTCTCTCTAAATGATGTGGACATGCAGGGTAATGCGTCTTCCCATTATGTT ACATCAACAATCCAGGACGATCAAGCGAGCATCCAGAACCCAGGTGAAACGTGAGCGCTCAACCCTTCCCTCATC ATGTCTGTTCTTTTATTAACTGTGCTGGACGCTGCAGGTTTCGCTATCATGTCACTTTGCGCGCTCCCACAGCCA TGATTAACCACCAAGCCGAAATCCCAGTTACCTATCTCAATAAAGGCCAGGCGTACTCAGTATCTGTGATTGATT CTACTCCGCCGCCCATGACTACGCAACCGATCAAATATCGTACCTTCATCCGTGTGTCATTCCAAGAAGATGAGC AGAGGGCAAAGCCGGCTGCTTGTTGGCAATTATGGAAGGAAGGTCGCGGTTCCAATGAAGCGCATCAACGAGGCG GCAAGCTCCAAGCAGTGGAATATGTCGATCCCATACAAGGCGGCATCGAAGACACGAAGAACCGGCAGATTCAGC TCGAGAGCTCGTCGTTCGATGGTTTTTGCGTCACGTGGACACTCAACCCGTCAACTGGAGTTTCGGAATGCTCGA TTCCTGTCCGATTCAACTTCTTGTCGACGGACTTTAGCCATTCCAAGGGTGTGAAGGGTATTCCGGTCAGATTGT GCGCAAAGACAGAGATGGTCTCCCCTGACGATACGAGCTCCACCTCGGGCAAAGAATCGGAGGTGTGCTACTGCA AGGTCAAGCTTTTCCGCGATCATGGTGCTGAGCGGAAACTGTCCAACGATGTCGCTCATGTCAAGAAGACCATCG AGAAACTCCGACAACAGATCGCCCAAGCCGAGATGGGTGCGGGCAACTACGGAAAGCGCAAGCGTAGCAATGGCT CCATTGCTCTCAAGGGTGCCGATCCGCGCCCGGCCAAGATCACCAAGCACAAACGGACATGGTCCATGGGCTCGC AGGACGGCCCTGGCAAGATGTCCTTGGAGGACGATCTCCATGCGAAGCTCGCGTTGATGCAAGACATGTTCACGT CAACACGACCGGTAAGCATTCTGGGATTGCGGGGTGAGGAGCAGGACGACCCGGACTTGTTCCCAGTCATGCTCC CCGAGTCGCGAGAATTCCTCAAGCGGGAAAACAGCCGTGGATCCCGCTTCAGTATTGATGGTGCATCCCTGCATG CCGTCTCGCCCACCAGCAGTAGCATCTCAATAAACTCACCATGCCACCCGACCAACCTCCAGTCCAACATTTTCT ATGACTCAGCGTACCATGGATCCTTGAGCACGTCTCGAGAGAACTCGCGCCCGTGCTCTGAAGTCCTGGGCGACA AGGCCACACTAAAGCATCCTGTCAAAGTACCGAAAGTGGCTTCAACTGACGGTGGCGCGCCAATGGGATTCATAG ACGCGGTGGATATTGACCCAACTTACCGACCACCCGCGGAGCGTCCAGTCAAGCCAAGTAAGTAAAGTCTGTAAC CCTCGAAAGATACTCGAACTGACCTAGCCCTAGTCGCGTGCTTCTACGTACGGTTCCCACGCAACGATCAGCGTT CGGATGACTATTACCGGGCCGTCTATCTGACTGAACGAACGGTTCGCGACTTGATGGAAAAGATTTCCATGAAGC AGCGCATCGACCCCCAGCGCATTGTGCGAGTCCTCCACGTCAAACAAAACGGCCTAAAAATAATGGTGGACGATG ATGTTGTTCGTGAGCTTCCAGACGGCCAAGACATGGTTGTCGAGATCTCCGAGGCATCGTCAATCGAGACCGCAG CAGCTACGGGATCGGGAAACCTCAGTTCAGCCGTTGAGGTCAAATTGAGCTACTAA |