Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11520.t1
Gene name
Locationscaffold_255:480..1072
Strand-
Gene length (bp)592
Transcript length (bp)537
Coding sequence length (bp)537
Protein length (aa) 179

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01227 GTP_cyclohydroI GTP cyclohydrolase I 1.9E-69 2 174

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11520.t1
MVKDMLQCLGEDPTREGLAKTPERYARAILFFTKGYTENPRDIVGNAIFTVDSRELVLVKDIEVSSLCEHHLMPF
VGKIHIGYIPDGRVLGLSKLARMAEIFARRLQLQERLTQQIANAIEQILKPQGVGVIMEASHMCMVTRGTQKYAA
MTTTCCMTGVLQRDSRARDNFYFLLNRR*
Coding >Ani_SJS100_1|g11520.t1
ATGGTTAAAGATATGCTGCAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAAGATAT
GCCAGGGCGATTTTATTCTTTACCAAGGGCTACACTGAGAATCCCAGGGATATTGTTGGCAATGCTATCTTCACA
GTCGATAGCCGGGAGCTTGTTCTGGTCAAAGACATTGAGGTTTCTAGCCTCTGCGAGCATCATCTGATGCCATTT
GTTGGAAAGATCCATATAGGTTATATTCCCGATGGCCGCGTGCTTGGTCTCTCTAAGCTCGCTCGCATGGCAGAA
ATTTTTGCTCGGCGCTTACAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTGAGCAGATTCTAAAG
CCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGCATGGTCACGCGAGGCACTCAAAAATACGCCGCC
ATGACGACAACCTGCTGTATGACCGGCGTGTTGCAGCGTGACAGCAGGGCCAGGGATAACTTCTACTTCCTTCTC
AATCGGCGATAA
Transcript >Ani_SJS100_1|g11520.t1
ATGGTTAAAGATATGCTGCAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAAGATAT
GCCAGGGCGATTTTATTCTTTACCAAGGGCTACACTGAGAATCCCAGGGATATTGTTGGCAATGCTATCTTCACA
GTCGATAGCCGGGAGCTTGTTCTGGTCAAAGACATTGAGGTTTCTAGCCTCTGCGAGCATCATCTGATGCCATTT
GTTGGAAAGATCCATATAGGTTATATTCCCGATGGCCGCGTGCTTGGTCTCTCTAAGCTCGCTCGCATGGCAGAA
ATTTTTGCTCGGCGCTTACAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTGAGCAGATTCTAAAG
CCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGCATGGTCACGCGAGGCACTCAAAAATACGCCGCC
ATGACGACAACCTGCTGTATGACCGGCGTGTTGCAGCGTGACAGCAGGGCCAGGGATAACTTCTACTTCCTTCTC
AATCGGCGATAA
Gene >Ani_SJS100_1|g11520.t1
ATGGTTAAAGATATGCTGCAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAAGATAT
GCCAGGGCGATTTTATTCTTTACCAAGGGCTACACTGAGAATCCCAGGGATATTGTTGGCAATGCTATCTTCACA
GTCGATAGCCGGGAGCTTGTTCTGGTCAAAGACATTGAGGTTTCTAGCCTCTGCGAGCATCATCTGATGCCATTT
GTTGGAAAGGTATGGCATAGCTTGTGTGGCTGGGAGCGTCGAATTACTCATTGTTTTTTCAAAGATCCATATAGG
TTATATTCCCGATGGCCGCGTGCTTGGTCTCTCTAAGCTCGCTCGCATGGCAGAAATTTTTGCTCGGCGCTTACA
ACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTGAGCAGATTCTAAAGCCTCAGGGGGTTGGTGTGAT
CATGGAAGCAAGCCACATGTGCATGGTCACGCGAGGCACTCAAAAATACGCCGCCATGACGACAACCTGCTGTAT
GACCGGCGTGTTGCAGCGTGACAGCAGGGCCAGGGATAACTTCTACTTCCTTCTCAATCGGCGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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