Protein ID | Ani_SJS100_1|g11502.t1 |
Gene name | |
Location | scaffold_248:5817..7798 |
Strand | - |
Gene length (bp) | 1981 |
Transcript length (bp) | 1659 |
Coding sequence length (bp) | 1659 |
Protein length (aa) | 553 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 39 | 19 |
2 | 77 | 99 | 22 |
3 | 109 | 131 | 22 |
4 | 143 | 162 | 19 |
5 | 172 | 194 | 22 |
6 | 201 | 220 | 19 |
7 | 230 | 252 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11502.t1 MPPALSDLYEQATQTQPVDWYGIWVAALLGVWLLTRLAYQLGRWTVQRHIAASIGRRLGRELPWLLQAIDIATAL EAILVGVLLGANIVLLLVSAHGWADVPQRAAKLAVLNLLPLGTGLTFGLPAHLLGISHSAVAWSHRWVGRVMAAH SLLHGAIAIARAENPIASLRHDWVPLLAAAAVLLMIPVTLHAVVRQHCQVAMKIHYSLAVTAMVALAYHTWDQGS ESRWQVVGAGALWIVLSAVAVSHAVFVQQRWSAGRPALTICPFHELLRMDITVSPNWHIRPGQYVYLWLPHAGFC SCFQLQPFYVAYWDDAPGPRILYVLTRPRASSLSTRLYLREWLHQRRQPALLLGPYGPSIDFSPFGTIVFIVEDT GILRVLPYICMLVQASEQRRAMVRKLKIVWQMQDFDNQCWLGDWMQDLLDLDRGESRILEFRLYYLTKRTSANPG DGFGERIKLCQGPLMAREIAQGHLSKRRGKLAVGVCACQSIRQPVQDVVQPRTGPDIKLFDLDLEPGHVRKALRR NKNIATFPVSSDSQQWAASRILEGHRE* |
Coding | >Ani_SJS100_1|g11502.t1 ATGCCTCCAGCCCTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGAGGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAACGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATCGCCACCGCTCTC GAGGCGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTCCCGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTCTTGCCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA GCCCATCTGCTCGGAATCAGCCACTCTGCCGTTGCGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT TTACTGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATGCGGTCGTCCGACAGCACTGTCAGGTG GCCATGAAAATCCACTACTCTCTGGCGGTCACGGCAATGGTGGCCCTGGCGTATCATACGTGGGACCAAGGGTCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCCGTCGCCGTCTCCCATGCAGTT TTCGTTCAACAACGCTGGAGTGCTGGGCGCCCCGCCCTAACCATATGTCCCTTTCATGAGCTGCTTCGCATGGAC ATTACAGTGTCCCCCAATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCAGGATTTTGC TCGTGCTTCCAACTCCAGCCCTTCTACGTCGCTTATTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTTCTG ACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTACACCAGCGTCGACAGCCCGCA CTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTCATCGTAGAGGACACT GGCATTTTGCGAGTGCTTCCCTATATCTGCATGCTCGTCCAGGCGAGCGAGCAGCGGAGGGCAATGGTACGCAAG TTGAAAATCGTCTGGCAGATGCAAGACTTTGACAACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGGAC CTCGACCGCGGTGAATCCAGGATTCTTGAATTTCGTCTGTATTACCTTACAAAGAGGACATCCGCTAACCCCGGT GATGGGTTCGGAGAACGAATTAAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGCCCAAGGTCACCTGAGC AAGCGCCGTGGGAAGCTAGCTGTCGGTGTGTGCGCCTGTCAGTCCATTCGCCAACCGGTCCAGGATGTCGTCCAG CCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGGTCATGTCCGGAAGGCGCTTCGTCGC AACAAGAACATCGCCACTTTTCCAGTCTCAAGTGATTCTCAGCAGTGGGCTGCCTCTCGCATTCTTGAAGGTCAT CGGGAATAA |
Transcript | >Ani_SJS100_1|g11502.t1 ATGCCTCCAGCCCTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGAGGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAACGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATCGCCACCGCTCTC GAGGCGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTCCCGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTCTTGCCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA GCCCATCTGCTCGGAATCAGCCACTCTGCCGTTGCGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT TTACTGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATGCGGTCGTCCGACAGCACTGTCAGGTG GCCATGAAAATCCACTACTCTCTGGCGGTCACGGCAATGGTGGCCCTGGCGTATCATACGTGGGACCAAGGGTCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCCGTCGCCGTCTCCCATGCAGTT TTCGTTCAACAACGCTGGAGTGCTGGGCGCCCCGCCCTAACCATATGTCCCTTTCATGAGCTGCTTCGCATGGAC ATTACAGTGTCCCCCAATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCAGGATTTTGC TCGTGCTTCCAACTCCAGCCCTTCTACGTCGCTTATTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTTCTG ACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTACACCAGCGTCGACAGCCCGCA CTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTCATCGTAGAGGACACT GGCATTTTGCGAGTGCTTCCCTATATCTGCATGCTCGTCCAGGCGAGCGAGCAGCGGAGGGCAATGGTACGCAAG TTGAAAATCGTCTGGCAGATGCAAGACTTTGACAACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGGAC CTCGACCGCGGTGAATCCAGGATTCTTGAATTTCGTCTGTATTACCTTACAAAGAGGACATCCGCTAACCCCGGT GATGGGTTCGGAGAACGAATTAAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGCCCAAGGTCACCTGAGC AAGCGCCGTGGGAAGCTAGCTGTCGGTGTGTGCGCCTGTCAGTCCATTCGCCAACCGGTCCAGGATGTCGTCCAG CCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGGTCATGTCCGGAAGGCGCTTCGTCGC AACAAGAACATCGCCACTTTTCCAGTCTCAAGTGATTCTCAGCAGTGGGCTGCCTCTCGCATTCTTGAAGGTCAT CGGGAATAA |
Gene | >Ani_SJS100_1|g11502.t1 ATGCCTCCAGCCCTCTCAGACCTGTATGAACAGGCTACCCAAACCCAGCCCGTTGACTGGTACGGGATATGGGTT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGAGGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAACGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATTGACATCGCCACCGCTCTC GAGGCGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTCCCGCAACGCGCGGCGAAGCTCGCCGTCCTGAACCTCTTGCCGCTCGGTACGGGCCTCACCTTTGGCCTCCCA GCCCATCTGCTCGGAATCAGCCACTCTGCCGTTGCGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTGAGGCATGACTGGGTGCCT TTACTGGTCAGTCCACCACGCTGCCCCTCGATGATGATGATGATGATGATGATGATGATAATTATCGTTGTGATC CGAGAGCATACCACTAACCAGGGCTAGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATGCGGTC GTCCGACAGCACTGTCAGGTGGCCATGAAAATCCACTACTCTCTGGCGGTCACGGCAATGGTGGCCCTGGCGTAT CATACGTGGGACCAAGGGTCAGAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCC GTCGCCGTCTCCCATGCAGTTTTCGTTCAACAACGCTGGAGTGCTGGGCGCCCCGCCCTAACCATATGTCCCTTT CATGAGCTGCTTCGCATGGACATTACAGTGTCCCCCAATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGG TTGCCTCACGCAGGATTTTGCTCGTGCTTCCAACTCCAGCCCTTCTACGTCGCTTATTGGGATGATGCGCCCGGA CCGCGCATCCTGTACGTTCTGACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTA CACCAGCGTCGACAGCCCGCACTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATC GTGTTCATCGTAGAGGACACTGGCATTTTGCGAGTGCTTCCCTATATCTGCATGCTCGTCCAGGCGAGCGAGCAG CGGAGGGCAATGGTACGCAAGTTGAAAATCGTCTGGCAGATGCAAGACTTTGGTATGGCCGTCTCTCCATGCACT GTCCGAATCCGCAGAGATCCTAATGAATCCTAGACAACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGG ACCTCGACCGCGGTGAATCCAGGGTAGGTGATAAACCCTCTGCAGCCATCAATAACGCTGCCCTGACTCCAATAG ATTCTTGAATTTCGTCTGTATTACCTTACAAAGAGGACATCCGCTAACCCCGGTGATGGGTTCGGAGAACGAATT AAACTGTGTCAAGGGCCACTGATGGCCAGAGAAATCGCCCAAGGTCACCTGAGCAAGCGCCGTGGGAAGCTAGCT GTCGGTGGTAGGTTTACTTCCCACCCGATCGATTCATCCGCCAACCTACAACGGCTGCGTGATGAGAACGCTTCT GACAGACCGTGTTGGACGTGCGCCCGAAGACTAATCTTGGTCCACCCTAGTGTGCGCCTGTCAGTCCATTCGCCA ACCGGTCCAGGATGTCGTCCAGCCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGGTCA TGTCCGGAAGGCGCTTCGTCGCAACAAGAACATCGCCACTTTTCCAGTCTCAAGTGATTCTCAGCAGTGGGCTGC CTCTCGCATTCTTGAAGGTCATCGGGAATAA |