Protein ID | Ani_SJS100_1|g11491.t1 |
Gene name | |
Location | scaffold_243:9574..11672 |
Strand | - |
Gene length (bp) | 2098 |
Transcript length (bp) | 1302 |
Coding sequence length (bp) | 1302 |
Protein length (aa) | 434 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | 5.3E-19 | 284 | 405 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11491.t1 MPLNAATRIASWADVVRSGTPSYPSTPNSRASTTASVKDRETVVKLDANSAAVLRKISPEDLCKRVNDALGSRIN LLGKAPRVIAAKHLKSGDVVLHTATTAEADTLKSTEEEWAKVLGTTARVIKPTYGVIVHGVRTDKESIDTDNQDR AIEKIESENTILHEGAKVAYVGWLTKEGRRKAASSLVVEFTTKYHANRVIREGLVLNAIHHDCVLYDRSCRLKQC YRCHEYGHIGPQCDAEERCGYCAGAHNTKECIARDADPKPAPKCVLTLELKWGAHEETIIIHNVYNPVPSLEPTN SAITTLQRVVDRWKDAEQIVVGDFNLHHPYWGGLKVQTPDPEAEEALQIIEEYQLGLLYEPGTTTFRVRDTETTI DLSLATPSLQDSLIRCRPRDDLDHDSDHIPSETVLAKPSRNSVSYFDGRPRVDAEITN* |
Coding | >Ani_SJS100_1|g11491.t1 ATGCCACTCAACGCAGCCACCCGAATCGCTTCCTGGGCGGATGTAGTCCGCTCGGGCACGCCCTCGTACCCGTCC ACGCCAAATAGCAGAGCCTCCACAACCGCAAGCGTCAAGGATAGGGAAACCGTAGTGAAACTTGATGCGAATTCC GCGGCCGTTCTCCGCAAGATATCACCGGAGGACCTCTGCAAACGAGTGAACGATGCCTTGGGATCACGGATAAAC CTGCTTGGGAAAGCCCCACGCGTCATAGCAGCAAAGCATCTGAAAAGCGGCGATGTAGTACTCCATACTGCAACC ACGGCAGAGGCAGACACACTGAAGAGCACCGAAGAGGAATGGGCCAAGGTCCTCGGGACAACTGCACGAGTAATT AAGCCCACGTATGGAGTGATCGTCCACGGAGTACGCACCGACAAGGAATCAATTGATACCGACAATCAAGACAGA GCTATCGAGAAGATCGAATCGGAGAACACCATACTCCATGAAGGAGCGAAGGTAGCCTACGTAGGGTGGTTGACC AAGGAAGGGAGAAGGAAAGCAGCCTCCTCCCTTGTCGTGGAATTCACAACAAAATACCACGCTAACCGGGTCATC CGAGAGGGACTGGTATTGAACGCGATCCACCACGATTGCGTCCTGTACGATCGGTCATGCAGGCTCAAGCAGTGC TATCGTTGCCACGAATATGGCCACATCGGACCCCAGTGCGACGCCGAAGAGAGATGCGGATACTGCGCGGGAGCG CACAATACCAAGGAATGCATAGCGAGGGACGCTGACCCGAAACCCGCGCCCAAATGCGTGCTCACACTGGAGCTA AAGTGGGGTGCGCATGAGGAAACCATCATCATTCATAACGTCTACAACCCCGTCCCAAGCCTCGAACCCACTAAC AGCGCCATAACAACGCTACAAAGGGTGGTAGACCGGTGGAAAGACGCGGAACAAATTGTGGTAGGAGACTTCAAC CTGCACCATCCCTATTGGGGAGGACTCAAGGTACAAACACCAGACCCTGAGGCGGAAGAGGCCCTCCAGATAATA GAAGAGTATCAGCTGGGCCTCCTATATGAGCCAGGAACGACCACGTTCAGGGTAAGGGACACGGAAACGACTATA GATCTTTCCCTGGCCACTCCAAGCCTGCAAGACAGCCTTATTCGATGCCGCCCACGGGACGACCTAGACCACGAC TCTGACCACATCCCCTCGGAAACTGTACTGGCCAAACCAAGTCGGAACAGTGTCAGCTATTTTGACGGCCGTCCG AGGGTCGACGCCGAAATCACGAATTAG |
Transcript | >Ani_SJS100_1|g11491.t1 ATGCCACTCAACGCAGCCACCCGAATCGCTTCCTGGGCGGATGTAGTCCGCTCGGGCACGCCCTCGTACCCGTCC ACGCCAAATAGCAGAGCCTCCACAACCGCAAGCGTCAAGGATAGGGAAACCGTAGTGAAACTTGATGCGAATTCC GCGGCCGTTCTCCGCAAGATATCACCGGAGGACCTCTGCAAACGAGTGAACGATGCCTTGGGATCACGGATAAAC CTGCTTGGGAAAGCCCCACGCGTCATAGCAGCAAAGCATCTGAAAAGCGGCGATGTAGTACTCCATACTGCAACC ACGGCAGAGGCAGACACACTGAAGAGCACCGAAGAGGAATGGGCCAAGGTCCTCGGGACAACTGCACGAGTAATT AAGCCCACGTATGGAGTGATCGTCCACGGAGTACGCACCGACAAGGAATCAATTGATACCGACAATCAAGACAGA GCTATCGAGAAGATCGAATCGGAGAACACCATACTCCATGAAGGAGCGAAGGTAGCCTACGTAGGGTGGTTGACC AAGGAAGGGAGAAGGAAAGCAGCCTCCTCCCTTGTCGTGGAATTCACAACAAAATACCACGCTAACCGGGTCATC CGAGAGGGACTGGTATTGAACGCGATCCACCACGATTGCGTCCTGTACGATCGGTCATGCAGGCTCAAGCAGTGC TATCGTTGCCACGAATATGGCCACATCGGACCCCAGTGCGACGCCGAAGAGAGATGCGGATACTGCGCGGGAGCG CACAATACCAAGGAATGCATAGCGAGGGACGCTGACCCGAAACCCGCGCCCAAATGCGTGCTCACACTGGAGCTA AAGTGGGGTGCGCATGAGGAAACCATCATCATTCATAACGTCTACAACCCCGTCCCAAGCCTCGAACCCACTAAC AGCGCCATAACAACGCTACAAAGGGTGGTAGACCGGTGGAAAGACGCGGAACAAATTGTGGTAGGAGACTTCAAC CTGCACCATCCCTATTGGGGAGGACTCAAGGTACAAACACCAGACCCTGAGGCGGAAGAGGCCCTCCAGATAATA GAAGAGTATCAGCTGGGCCTCCTATATGAGCCAGGAACGACCACGTTCAGGGTAAGGGACACGGAAACGACTATA GATCTTTCCCTGGCCACTCCAAGCCTGCAAGACAGCCTTATTCGATGCCGCCCACGGGACGACCTAGACCACGAC TCTGACCACATCCCCTCGGAAACTGTACTGGCCAAACCAAGTCGGAACAGTGTCAGCTATTTTGACGGCCGTCCG AGGGTCGACGCCGAAATCACGAATTAG |
Gene | >Ani_SJS100_1|g11491.t1 ATGCCACTCAACGCAGCCACCCGAATCGCTTCCTGGGCGGATGTAGTCCGCTCGGGCACGCCCTCGTACCCGTCC ACGCCAAATAGCAGAGCCTCCACAACCGCAAGCGTCAAGGATAGGGAAACCGTAGTGAAACTTGATGCGAATTCC GCGGCCGTTCTCCGCAAGATATCACCGGAGGACCTCTGCAAACGAGTGAACGATGCCTTGGGATCACGGATAAAC CTGCTTGGGAAAGCCCCACGCGTCATAGCAGCAAAGCATCTGAAAAGCGGCGATGTAGTACTCCATACTGCAACC ACGGCAGAGGCAGACACACTGAAGAGCACCGAAGAGGAATGGGCCAAGGTCCTCGGGACAACTGCACGAGTAATT AAGCCCACGTATGGAGTGATCGTCCACGGAGTACGCACCGACAAGGAATCAATTGATACCGACAATCAAGACAGA GCTATCGAGAAGATCGAATCGGAGAACACCATACTCCATGAAGGAGCGAAGGTAGCCTACGTAGGGTGGTTGACC AAGGAAGGGAGAAGGAAAGCAGCCTCCTCCCTTGTCGTGGAATTCACAACAAAATACCACGCTAACCGGGTCATC CGAGAGGGACTGGTATTGAACGCGATCCACCACGATTGCGTCCTGTACGATCGGTCATGCAGGCTCAAGCAGTGC TATCGTTGCCACGAATATGGCCACATCGGACCCCAGTGCGACGCCGAAGAGAGATGCGGATACTGCGCGGGAGCG CACAATACCAAGGAATGCATAGCGAGGGACGCTGACCCGAAACCCGCGCCCAAATGCGTGCTGTGTAAGGGTCAA CACACTGCCTGGAGCAACGCTTTCCCGCGAAGACGGAGAGAGCAAGCAAGGATAGAGCAAGCCCGGAAGACCCGT CCTATCTTTCACTACGAATCAGACGAATCAAGACCATCAGCTGTTGGAACCGCCACCGGCGGAGGCGTAGAGAGG CCTTCGAATCCGCTTGAGAGGGGGAGCGACCTAGTAAATTTGACTGATACGCCGACCCCGAGTCTGCCCGCTAGT CAATCTCATCACTATGACCTCCGAAAGACTATTCAGCTATGAACACGCGTGGGAGAGGATGAATGGCATACGGCA CGTCGTAGGCGACGAACACGATCGCCCCAGAAGAGTAGCCAGCGGGATAGAAGCCGAAGCCCGAGGCCTGGACAA GGCCGCTCACTCTTTCAGAACGGCCCGTGAATGCCACCCTGGGAAGAGAAAATGTGCACCACCAATCAGTCCCGA GAGAGAAGATACAGACACTGGAGAACTCCTTCCAACTCACGCCCAGCCAACAATGAGTACACGACCCATGCTGTC AATACTGCAGTACAATGTAATGAAATCTCGTGATAGAGTTATGGCCGCACTGCTTCGAGATAGGAAAATTTCAAG CTACGATGTGTTGGCTTTCCAGGAGCCATGGCGGAACCCTTTCGTCCATGCAACCCACAGTCCCATCCCTCAACA TTTCGAAGTGGCCTACTATGACCACAGGAAGACTCGCGTCTGCTTCTTTGTAAACAAAAGGATCGCGAGCCATCA ATGGACAGTCACACACCACACACCAGACCTTAGCACACTGGAGCTAAAGTGGGGTGCGCATGAGGAAACCATCAT CATTCATAACGTCTACAACCCCGTCCCAAGCCTCGAACCCACTAACAGCGCCATAACAACGCTACAAAGGGTGGT AGACCGGTGGAAAGACGCGGAACAAATTGTGGTAGGAGACTTCAACCTGCACCATCCCTATTGGGGAGGACTCAA GGTACAAACACCAGACCCTGAGGCGGAAGAGGCCCTCCAGATAATAGAAGAGTATCAGCTGGGCCTCCTATATGA GCCAGGAACGACCACGTTCAGGGTAAGGGACACGGAAACGACTATAGATCTTTCCCTGGCCACTCCAAGCCTGCA AGACAGCCTTATTCGATGCCGCCCACGGGACGACCTAGACCACGACTCTGACCACATCCCCTCGGAAACTGTACT GGCCAAACCAAGTCGGAACAGTGTCAGCTATTTTGACGGCCGTCCGAGGGTCGACGCCGAAATCACGAATTAG |