© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11434.t1 |
| Gene name | |
| Location | scaffold_223:10958..12234 |
| Strand | - |
| Gene length (bp) | 1276 |
| Transcript length (bp) | 1026 |
| Coding sequence length (bp) | 1026 |
| Protein length (aa) | 342 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 100 | 122 | 22 |
| 4 | 132 | 154 | 22 |
| 5 | 214 | 233 | 19 |
| 6 | 238 | 260 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11434.t1 MSSSVFGDPPPGTDLTASRRGVNNAAVSVTYVLAAIAIALRFFARSRVQQASIAADDWMIVAALLSVTANFVSTI VGGYYGLGKHVWAIPLHDVIKVMQILFAYVLIYVVTVPLIKLSVILFYRRIFGMNKAMWFCVALTIGYWVSCTIA FLVCCRPVSYYWTQYADPAGGRCVYNLYPFYIGNAAANVTTDVIILLAPMPVIWRLHMRTTQKVLVCSIFLLGSL SVDITWIMGNVFIWSSVEPCIGIVCACLPTLQPLLRYTIQRIFGSRVGRYLGSSENKLSSHTRNAPVRKPRDWDE SLLATQTVRVEMDSMRREDESDEGRIMIETDFQVIESKRAV* |
| Coding | >Ani_SJS100_1|g11434.t1 ATGTCCAGCAGCGTCTTTGGGGATCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAACAATGCA GCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCTTCGATTTTTCGCCAGATCTCGGGTGCAACAG GCTTCCATTGCTGCCGATGATTGGATGATAGTTGCTGCTTTGCTGTCCGTAACCGCGAATTTCGTCTCCACGATT GTTGGAGGCTACTATGGCCTCGGGAAGCATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCAAATA TTGTTCGCATACGTCCTCATATACGTCGTCACCGTGCCCTTGATCAAGCTTTCGGTCATCCTCTTTTACCGCCGC ATTTTCGGTATGAACAAGGCGATGTGGTTCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCATCGCC TTTCTCGTCTGTTGCCGGCCTGTCTCATACTACTGGACGCAGTATGCTGATCCGGCTGGCGGCCGCTGCGTCTAC AACCTTTATCCATTCTATATCGGAAATGCCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCCCATG CCTGTTATCTGGAGGCTTCACATGCGAACCACCCAGAAGGTTCTGGTTTGCAGCATTTTCCTACTTGGCAGCTTG TCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGTCCAGTGTGGAGCCGTGCATCGGAATTGTTTGT GCCTGTCTGCCTACCTTGCAACCCCTGCTGCGGTACACCATCCAACGGATATTCGGCTCGCGTGTGGGAAGGTAT CTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATGCTCCCGTGAGGAAGCCCAGGGATTGGGACGAG AGTCTGCTTGCAACGCAGACTGTCCGAGTCGAGATGGACTCTATGCGCAGAGAAGACGAGAGTGACGAGGGCAGA ATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGGCAGTATAA |
| Transcript | >Ani_SJS100_1|g11434.t1 ATGTCCAGCAGCGTCTTTGGGGATCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAACAATGCA GCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCTTCGATTTTTCGCCAGATCTCGGGTGCAACAG GCTTCCATTGCTGCCGATGATTGGATGATAGTTGCTGCTTTGCTGTCCGTAACCGCGAATTTCGTCTCCACGATT GTTGGAGGCTACTATGGCCTCGGGAAGCATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCAAATA TTGTTCGCATACGTCCTCATATACGTCGTCACCGTGCCCTTGATCAAGCTTTCGGTCATCCTCTTTTACCGCCGC ATTTTCGGTATGAACAAGGCGATGTGGTTCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCATCGCC TTTCTCGTCTGTTGCCGGCCTGTCTCATACTACTGGACGCAGTATGCTGATCCGGCTGGCGGCCGCTGCGTCTAC AACCTTTATCCATTCTATATCGGAAATGCCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCCCATG CCTGTTATCTGGAGGCTTCACATGCGAACCACCCAGAAGGTTCTGGTTTGCAGCATTTTCCTACTTGGCAGCTTG TCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGTCCAGTGTGGAGCCGTGCATCGGAATTGTTTGT GCCTGTCTGCCTACCTTGCAACCCCTGCTGCGGTACACCATCCAACGGATATTCGGCTCGCGTGTGGGAAGGTAT CTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATGCTCCCGTGAGGAAGCCCAGGGATTGGGACGAG AGTCTGCTTGCAACGCAGACTGTCCGAGTCGAGATGGACTCTATGCGCAGAGAAGACGAGAGTGACGAGGGCAGA ATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGGCAGTATAA |
| Gene | >Ani_SJS100_1|g11434.t1 ATGTCCAGCAGCGTCTTTGGGGATCCTCCTCCAGGGACGGACCTGACGGCCAGCCGGCGTGGGGTGAACAATGCA GCTGTGAGTGTCACATACGTGCTGGCAGCTATTGCCATTGCCCTTCGATTTTTCGCCAGATCTCGGGTGCAACAG GCTTCCATTGCTGCCGATGATTGGATGATAGTTGCTGCTTTGGTATGTGCTTGTGACATATTGCCTCTCCAGAAG CACCGGATGGCGATGCTGATGATTAGGATGACTGCAGCTGTCCGTAACCGCGAATTTCGTCTCCACGATTGTTGG TTCGTTCGCCAGGCCATCACCCGGCAAAGAGTACTGACCAACTCTATACAGGAGGCTACTATGGCCTCGGGAAGC ATGTATGGGCTATACCCCTGCATGATGTGATCAAGGTCATGCAAATATTGTTCGCATACGTCCTCATATACGTCG TCACCGTGCCCTTGATCAAGCTTTCGGTCATCCTCTTTTACCGCCGCATTTTCGGTATGAACAAGGCGATGTGGT TCTGCGTCGCATTGACGATCGGCTACTGGGTTTCTTGCACCATCGCCTTTCTCGTCTGTTGCCGGCCTGTCTCAT ACTACTGGACGCAGTATGCTGATCCGGCTGGCGGCCGCTGCGTCTACAACCTTTATCCATTCTATATCGGAAATG CCGCTGCAAATGTGACCACGGACGTGATCATTCTGCTAGCCCCCATGCCTGTTATCTGGAGGCTTCACATGCGAA CCACCCAGAAGGTTCTGGTTTGCAGCATTTTCCTACTTGGCAGCTTGTATGTTGTGTCGATCGCCCCCCTTTCCG ACCCCATGTTTTATCCTGTCCGGAAACTGATAAAAACATTATTTGTAGTGTCTGCGTGGCGAGCCTCATCCGAAT ATATTACATGACGTTTCTTAGCAGGTCCGTGGATATCACCTGGATCATGGGAAATGTCTTCATCTGGTCCAGTGT GGAGCCGTGCATCGGAATTGTTTGTGCCTGTCTGCCTACCTTGCAACCCCTGCTGCGGTACACCATCCAACGGAT ATTCGGCTCGCGTGTGGGAAGGTATCTGGGTAGCTCGGAGAATAAGCTGTCCAGCCACACGAGGAATGCTCCCGT GAGGAAGCCCAGGGATTGGGACGAGAGTCTGCTTGCAACGCAGACTGTCCGAGTCGAGATGGACTCTATGCGCAG AGAAGACGAGAGTGACGAGGGCAGAATCATGATTGAGACCGACTTCCAAGTGATCGAGAGCAAGAGGGCAGTATA A |