© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1140.t1 |
| Gene name | |
| Location | scaffold_004:130458..131396 |
| Strand | + |
| Gene length (bp) | 938 |
| Transcript length (bp) | 726 |
| Coding sequence length (bp) | 726 |
| Protein length (aa) | 242 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03188 | Cytochrom_B561 | Eukaryotic cytochrome b561 | 3.9E-13 | 76 | 203 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 52 | 74 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 145 | 167 | 22 |
| 4 | 188 | 207 | 19 |
| 5 | 212 | 234 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1140.t1 MASATGIPQEHPDTIQEQEDAPLLHTPGNVPQKENAAIYQNLFTGTASAAQVGIWMLAILVWTGILSHPLIFFSA HPLLNSAAILLQVQATLILQPTTTPHQKRLGTIIHYIIQTLSLLGFITAFIIIEINKGDHARFTSPHGILGLITY IFIILQVLVGVVQYFVPVQVLGSVEKGKSIYKYHRKSGYVLLLLELATVSAATQTTYNLNVLSIPLWGVLVASVL VILGLGARIKKHKLGL* |
| Coding | >Ani_SJS100_1|g1140.t1 ATGGCTTCTGCTACGGGTATCCCCCAAGAACATCCCGACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCAT ACCCCGGGAAATGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTCACAGGCACGGCCAGTGCAGCT CAAGTCGGAATCTGGATGCTGGCCATCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGATATTCTTCTCCGCT CATCCCCTCCTCAACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTCTCATCCTCCAACCCACCACCACTCCT CACCAAAAGCGCCTCGGAACCATCATCCATTACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTTC ATCATCATCGAGATCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGCACGGCATCCTAGGTCTCATCACCTAC ATCTTCATTATCCTACAGGTCCTGGTAGGTGTCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGAG AAGGGCAAGAGCATCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGCTGCTCTTGGAGCTGGCAACTGTCTCG GCGGCAACTCAGACTACCTACAATCTCAACGTGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTTG GTTATCCTGGGGTTGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGTAA |
| Transcript | >Ani_SJS100_1|g1140.t1 ATGGCTTCTGCTACGGGTATCCCCCAAGAACATCCCGACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCAT ACCCCGGGAAATGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTCACAGGCACGGCCAGTGCAGCT CAAGTCGGAATCTGGATGCTGGCCATCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGATATTCTTCTCCGCT CATCCCCTCCTCAACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTCTCATCCTCCAACCCACCACCACTCCT CACCAAAAGCGCCTCGGAACCATCATCCATTACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTTC ATCATCATCGAGATCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGCACGGCATCCTAGGTCTCATCACCTAC ATCTTCATTATCCTACAGGTCCTGGTAGGTGTCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGAG AAGGGCAAGAGCATCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGCTGCTCTTGGAGCTGGCAACTGTCTCG GCGGCAACTCAGACTACCTACAATCTCAACGTGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTTG GTTATCCTGGGGTTGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGTAA |
| Gene | >Ani_SJS100_1|g1140.t1 ATGGCTTCTGCTACGGGTATCCCCCAAGAACATCCCGACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCAT ACCCCGGGAAATGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTCACAGGTGAGTTGATTATTCCT CTGGGTAACGATGAAAATGTATCTTCTCCCAGCTAATGCTCGTTACATTATTAGGCACGGCCAGTGCAGCTCAAG TCGGAATCTGGATGGTAAGAAGATCCTTGTTGCTGCTCTTGTGTCTTACTGACTGAGTCCTTGCTCAGCTGGCCA TCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGATATTCTTCTCCGCTCATCCCGTAAGTCATCATCACCACA TTCACTAGTTATTATTACCATCACGGCTATCCCAGTAAGTAGTGTTCCACAAACTAATTCCTCATCAGCTCCTCA ACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTCTCATCCTCCAACCCACCACCACTCCTCACCAAAAGCGCC TCGGAACCATCATCCATTACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTTCATCATCATCGAGA TCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGCACGGCATCCTAGGTCTCATCACCTACATCTTCATTATCC TACAGGTCCTGGTAGGTGTCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGAGAAGGGCAAGAGCA TCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGCTGCTCTTGGAGCTGGCAACTGTCTCGGCGGCAACTCAGA CTACCTACAATCTCAACGTGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTTGGTTATCCTGGGGT TGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGTAA |