© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11389.t1 |
| Gene name | |
| Location | scaffold_207:9145..11980 |
| Strand | + |
| Gene length (bp) | 2835 |
| Transcript length (bp) | 2835 |
| Coding sequence length (bp) | 2835 |
| Protein length (aa) | 945 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13374 | TPR_10 | Tetratricopeptide repeat | 8.6E-04 | 728 | 757 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.6E-10 | 759 | 799 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 3.6E-13 | 801 | 841 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 1.7E-11 | 843 | 884 |
| PF13374 | TPR_10 | Tetratricopeptide repeat | 8.8E-07 | 885 | 926 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 7.3E-12 | 726 | 791 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 3.0E-08 | 789 | 833 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 6.9E-15 | 812 | 875 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 8.6E-14 | 853 | 915 |
| PF13424 | TPR_12 | Tetratricopeptide repeat | 4.1E-07 | 886 | 935 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 1.5E-02 | 805 | 824 |
| PF13176 | TPR_7 | Tetratricopeptide repeat | 3.2E-02 | 889 | 908 |
| PF00931 | NB-ARC | NB-ARC domain | 4.0E-10 | 335 | 533 |
| PF17874 | TPR_MalT | MalT-like TPR region | 1.7E-08 | 757 | 917 |
| PF07721 | TPR_4 | Tetratricopeptide repeat | 4.9E-01 | 764 | 782 |
| PF07721 | TPR_4 | Tetratricopeptide repeat | 7.4E-01 | 805 | 824 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042802 | identical protein binding | Yes |
| GO:0043531 | ADP binding | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043167 | ion binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 55 | 77 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11389.t1 MTSAQNDYTVAWICALPLEVAAAKAMLDDIHTPLPQPESDHNVYTLGRVGRHNVVVACLPSGVYGTISATGVVSH MVSTFRNIRFGLMVGIGGGVPSHSADVRLGDVVVSKPSVTSSGVIQYDYGKTLCSGRFQHTGSLNKSPPVLLKAV SQLESDYMTGKRLTSEILDGVLHNCDTMQEQFSRPKDDWLFPPTYNHKGSEHDCSVCDQAKLVNRPKRRTDVPFI YYGSIASGDQVMKDAKTRDSIARDLDILCFEMEAAGLMDELPSLVVRGICDYCDSHKNKQWQGYAALAAAAYTKA LLSIVPTCCRKESRCSKQPAWMVPFRRNPRFAGREKEIMRIEELILQQNGNDKVAICGLGGVGKTQIALELAYRM RDRDPKCSIFWITCTSYEGVEQAYLKIATMLEMTDIKPAEAEEKVKAYLSQGGAGKWLLLFDNADDMGIWNKSDI NNSVLIDFLPHSEQGHILFTTRSRKVAVKLASSHVITIAEPDRQTSVQILQNSLVEKSLVNDCDLALILLEQLAF LPLAIIQAAAYINENSIGLSEHLQLLRDPEPDVIELLSEDFGDEMRYKDIQNPVALTWFISFQQIQRSNKLATDY LSFMACVNPRNIPQSLLPQPISNKKRIEAIGLLKAFSFIIEEGENRFFNLHRLVHLATRNWMRESQQFSQQLLRT ADRLGEVFPNNNHTNRQMWREYLPHALSIIAEADFRKEQEKYITFFQKVCRCLHSDGRWKEAEVLEMQVMNICKG VLGPEHPATLTSMGNLALIYWGQGRWKEAEELGVQVIQLLKIVLGPEHPATLTTMGNLASTYWDQGRWKEAEELG VEVMDIRKRVLGPEHPATLTSMGDLASTYRSQGQWKEAEELGMQVMDIRKRVLGPEHPNTLASMDNLASIYRNQE RWEEAEELGVQVTELFMRVLGLEHPHTLTSMENLAPVWESQRKL* |
| Coding | >Ani_SJS100_1|g11389.t1 ATGACTTCTGCGCAAAACGATTACACGGTTGCATGGATCTGCGCCTTGCCGTTGGAAGTAGCAGCGGCGAAGGCC ATGCTGGACGACATCCACACTCCGCTTCCCCAGCCAGAGTCCGACCACAATGTCTACACACTTGGAAGGGTCGGC AGGCATAATGTGGTGGTGGCCTGTCTGCCTAGTGGTGTCTATGGGACGATATCCGCTACAGGTGTAGTGTCACAT ATGGTTTCTACCTTTCGGAATATCCGCTTCGGGTTGATGGTGGGTATTGGAGGCGGAGTTCCGAGCCACAGTGCT GATGTTCGCCTCGGTGATGTTGTGGTCAGCAAGCCGAGTGTCACCTCAAGTGGTGTTATCCAATATGACTACGGC AAGACACTATGCAGCGGACGATTCCAGCACACCGGGTCGCTTAATAAATCTCCCCCAGTATTGTTGAAGGCCGTG TCTCAATTAGAGAGTGATTACATGACCGGGAAAAGGCTGACCAGCGAAATTCTGGATGGTGTGCTGCACAACTGC GATACAATGCAAGAACAATTTTCGCGCCCGAAAGACGACTGGCTATTCCCCCCAACATACAATCATAAGGGTAGC GAACACGACTGTTCGGTGTGTGATCAGGCAAAATTAGTTAACCGTCCTAAGCGAAGGACTGACGTCCCTTTTATC TATTATGGCTCGATCGCGTCCGGAGATCAGGTCATGAAAGATGCCAAGACTCGAGATTCCATTGCTCGAGACCTA GACATACTCTGTTTTGAAATGGAGGCTGCTGGGCTTATGGACGAACTGCCATCACTGGTCGTTCGCGGAATTTGT GACTATTGTGATTCTCATAAAAATAAACAGTGGCAAGGATATGCTGCACTTGCGGCTGCTGCGTACACGAAGGCT CTCCTGTCAATAGTTCCCACTTGTTGTCGCAAGGAATCACGTTGCTCGAAGCAGCCAGCTTGGATGGTCCCCTTC CGAAGGAACCCGCGATTCGCAGGCCGGGAAAAAGAAATCATGAGAATTGAAGAATTAATTCTGCAACAGAATGGA AATGACAAAGTTGCTATTTGCGGACTAGGCGGAGTTGGGAAGACCCAGATTGCACTTGAGCTGGCCTACCGCATG CGAGATCGGGACCCCAAATGCTCCATTTTTTGGATCACGTGTACCAGCTATGAGGGCGTGGAACAAGCCTATCTG AAAATTGCCACGATGCTGGAAATGACTGATATAAAGCCAGCAGAGGCGGAAGAAAAAGTCAAAGCTTATCTCAGC CAGGGTGGTGCTGGAAAGTGGCTTCTTCTTTTCGATAATGCAGACGATATGGGGATATGGAACAAGAGCGATATT AATAACTCAGTGCTGATTGACTTCCTTCCTCATAGTGAGCAGGGCCATATCCTCTTCACCACACGCAGCCGCAAG GTAGCTGTAAAACTTGCATCTTCTCATGTGATAACAATTGCTGAGCCGGACAGACAGACTTCTGTCCAGATTCTA CAGAACTCACTGGTTGAAAAGTCCTTGGTAAATGATTGTGATCTAGCTCTTATACTTCTCGAGCAGCTGGCCTTT CTCCCTCTGGCGATCATCCAGGCGGCAGCGTATATAAATGAGAACAGCATCGGCCTCTCTGAACATCTTCAGCTT CTACGGGATCCGGAGCCAGATGTGATTGAACTGCTGAGTGAAGATTTTGGAGATGAAATGCGATACAAAGACATC CAGAATCCTGTTGCTTTGACATGGTTCATCTCATTCCAACAAATTCAACGGTCAAATAAACTCGCGACAGACTAT TTGTCATTCATGGCCTGCGTCAATCCTCGCAATATTCCACAATCCTTACTTCCACAGCCAATCTCTAATAAGAAG AGAATTGAGGCCATTGGCCTCCTCAAGGCCTTCTCCTTCATTATTGAGGAGGGCGAAAACCGTTTCTTTAACCTA CACCGACTAGTCCATCTTGCGACCCGCAACTGGATGAGGGAGAGCCAACAGTTTAGCCAGCAATTACTGAGAACA GCTGATCGATTGGGTGAAGTCTTCCCAAACAACAATCACACAAACCGGCAGATGTGGCGAGAATATCTGCCACAT GCTCTTTCAATAATAGCAGAAGCTGACTTCCGAAAGGAGCAAGAGAAATATATTACTTTTTTCCAAAAAGTCTGT AGGTGTCTGCATAGTGACGGACGATGGAAGGAAGCAGAAGTGCTGGAAATGCAAGTGATGAATATATGCAAGGGA GTGCTGGGGCCAGAACACCCAGCCACTCTCACCAGCATGGGCAACCTGGCATTAATATACTGGGGCCAGGGACGA TGGAAGGAAGCAGAAGAGCTGGGAGTGCAAGTCATACAGCTGTTAAAGATAGTATTGGGACCAGAACATCCAGCC ACTCTTACCACTATGGGCAACCTGGCATCAACATACTGGGATCAGGGACGATGGAAGGAAGCAGAAGAGCTAGGA GTGGAGGTGATGGATATACGCAAGAGAGTGCTGGGGCCAGAACACCCAGCCACTCTTACCAGCATGGGCGACCTG GCATCAACATACCGGAGTCAGGGACAATGGAAGGAAGCAGAAGAGTTGGGAATGCAGGTGATGGATATACGCAAG AGAGTGCTGGGGCCAGAACACCCAAATACCCTTGCCAGCATGGACAACCTGGCATCAATATATCGGAATCAGGAG CGATGGGAAGAAGCAGAAGAGCTAGGTGTGCAAGTCACAGAGCTGTTTATGAGAGTTCTAGGGTTAGAACACCCT CACACTCTCACCAGCATGGAGAATCTAGCCCCTGTATGGGAAAGCCAGAGAAAGTTATAA |
| Transcript | >Ani_SJS100_1|g11389.t1 ATGACTTCTGCGCAAAACGATTACACGGTTGCATGGATCTGCGCCTTGCCGTTGGAAGTAGCAGCGGCGAAGGCC ATGCTGGACGACATCCACACTCCGCTTCCCCAGCCAGAGTCCGACCACAATGTCTACACACTTGGAAGGGTCGGC AGGCATAATGTGGTGGTGGCCTGTCTGCCTAGTGGTGTCTATGGGACGATATCCGCTACAGGTGTAGTGTCACAT ATGGTTTCTACCTTTCGGAATATCCGCTTCGGGTTGATGGTGGGTATTGGAGGCGGAGTTCCGAGCCACAGTGCT GATGTTCGCCTCGGTGATGTTGTGGTCAGCAAGCCGAGTGTCACCTCAAGTGGTGTTATCCAATATGACTACGGC AAGACACTATGCAGCGGACGATTCCAGCACACCGGGTCGCTTAATAAATCTCCCCCAGTATTGTTGAAGGCCGTG TCTCAATTAGAGAGTGATTACATGACCGGGAAAAGGCTGACCAGCGAAATTCTGGATGGTGTGCTGCACAACTGC GATACAATGCAAGAACAATTTTCGCGCCCGAAAGACGACTGGCTATTCCCCCCAACATACAATCATAAGGGTAGC GAACACGACTGTTCGGTGTGTGATCAGGCAAAATTAGTTAACCGTCCTAAGCGAAGGACTGACGTCCCTTTTATC TATTATGGCTCGATCGCGTCCGGAGATCAGGTCATGAAAGATGCCAAGACTCGAGATTCCATTGCTCGAGACCTA GACATACTCTGTTTTGAAATGGAGGCTGCTGGGCTTATGGACGAACTGCCATCACTGGTCGTTCGCGGAATTTGT GACTATTGTGATTCTCATAAAAATAAACAGTGGCAAGGATATGCTGCACTTGCGGCTGCTGCGTACACGAAGGCT CTCCTGTCAATAGTTCCCACTTGTTGTCGCAAGGAATCACGTTGCTCGAAGCAGCCAGCTTGGATGGTCCCCTTC CGAAGGAACCCGCGATTCGCAGGCCGGGAAAAAGAAATCATGAGAATTGAAGAATTAATTCTGCAACAGAATGGA AATGACAAAGTTGCTATTTGCGGACTAGGCGGAGTTGGGAAGACCCAGATTGCACTTGAGCTGGCCTACCGCATG CGAGATCGGGACCCCAAATGCTCCATTTTTTGGATCACGTGTACCAGCTATGAGGGCGTGGAACAAGCCTATCTG AAAATTGCCACGATGCTGGAAATGACTGATATAAAGCCAGCAGAGGCGGAAGAAAAAGTCAAAGCTTATCTCAGC CAGGGTGGTGCTGGAAAGTGGCTTCTTCTTTTCGATAATGCAGACGATATGGGGATATGGAACAAGAGCGATATT AATAACTCAGTGCTGATTGACTTCCTTCCTCATAGTGAGCAGGGCCATATCCTCTTCACCACACGCAGCCGCAAG GTAGCTGTAAAACTTGCATCTTCTCATGTGATAACAATTGCTGAGCCGGACAGACAGACTTCTGTCCAGATTCTA CAGAACTCACTGGTTGAAAAGTCCTTGGTAAATGATTGTGATCTAGCTCTTATACTTCTCGAGCAGCTGGCCTTT CTCCCTCTGGCGATCATCCAGGCGGCAGCGTATATAAATGAGAACAGCATCGGCCTCTCTGAACATCTTCAGCTT CTACGGGATCCGGAGCCAGATGTGATTGAACTGCTGAGTGAAGATTTTGGAGATGAAATGCGATACAAAGACATC CAGAATCCTGTTGCTTTGACATGGTTCATCTCATTCCAACAAATTCAACGGTCAAATAAACTCGCGACAGACTAT TTGTCATTCATGGCCTGCGTCAATCCTCGCAATATTCCACAATCCTTACTTCCACAGCCAATCTCTAATAAGAAG AGAATTGAGGCCATTGGCCTCCTCAAGGCCTTCTCCTTCATTATTGAGGAGGGCGAAAACCGTTTCTTTAACCTA CACCGACTAGTCCATCTTGCGACCCGCAACTGGATGAGGGAGAGCCAACAGTTTAGCCAGCAATTACTGAGAACA GCTGATCGATTGGGTGAAGTCTTCCCAAACAACAATCACACAAACCGGCAGATGTGGCGAGAATATCTGCCACAT GCTCTTTCAATAATAGCAGAAGCTGACTTCCGAAAGGAGCAAGAGAAATATATTACTTTTTTCCAAAAAGTCTGT AGGTGTCTGCATAGTGACGGACGATGGAAGGAAGCAGAAGTGCTGGAAATGCAAGTGATGAATATATGCAAGGGA GTGCTGGGGCCAGAACACCCAGCCACTCTCACCAGCATGGGCAACCTGGCATTAATATACTGGGGCCAGGGACGA TGGAAGGAAGCAGAAGAGCTGGGAGTGCAAGTCATACAGCTGTTAAAGATAGTATTGGGACCAGAACATCCAGCC ACTCTTACCACTATGGGCAACCTGGCATCAACATACTGGGATCAGGGACGATGGAAGGAAGCAGAAGAGCTAGGA GTGGAGGTGATGGATATACGCAAGAGAGTGCTGGGGCCAGAACACCCAGCCACTCTTACCAGCATGGGCGACCTG GCATCAACATACCGGAGTCAGGGACAATGGAAGGAAGCAGAAGAGTTGGGAATGCAGGTGATGGATATACGCAAG AGAGTGCTGGGGCCAGAACACCCAAATACCCTTGCCAGCATGGACAACCTGGCATCAATATATCGGAATCAGGAG CGATGGGAAGAAGCAGAAGAGCTAGGTGTGCAAGTCACAGAGCTGTTTATGAGAGTTCTAGGGTTAGAACACCCT CACACTCTCACCAGCATGGAGAATCTAGCCCCTGTATGGGAAAGCCAGAGAAAGTTATAA |
| Gene | >Ani_SJS100_1|g11389.t1 ATGACTTCTGCGCAAAACGATTACACGGTTGCATGGATCTGCGCCTTGCCGTTGGAAGTAGCAGCGGCGAAGGCC ATGCTGGACGACATCCACACTCCGCTTCCCCAGCCAGAGTCCGACCACAATGTCTACACACTTGGAAGGGTCGGC AGGCATAATGTGGTGGTGGCCTGTCTGCCTAGTGGTGTCTATGGGACGATATCCGCTACAGGTGTAGTGTCACAT ATGGTTTCTACCTTTCGGAATATCCGCTTCGGGTTGATGGTGGGTATTGGAGGCGGAGTTCCGAGCCACAGTGCT GATGTTCGCCTCGGTGATGTTGTGGTCAGCAAGCCGAGTGTCACCTCAAGTGGTGTTATCCAATATGACTACGGC AAGACACTATGCAGCGGACGATTCCAGCACACCGGGTCGCTTAATAAATCTCCCCCAGTATTGTTGAAGGCCGTG TCTCAATTAGAGAGTGATTACATGACCGGGAAAAGGCTGACCAGCGAAATTCTGGATGGTGTGCTGCACAACTGC GATACAATGCAAGAACAATTTTCGCGCCCGAAAGACGACTGGCTATTCCCCCCAACATACAATCATAAGGGTAGC GAACACGACTGTTCGGTGTGTGATCAGGCAAAATTAGTTAACCGTCCTAAGCGAAGGACTGACGTCCCTTTTATC TATTATGGCTCGATCGCGTCCGGAGATCAGGTCATGAAAGATGCCAAGACTCGAGATTCCATTGCTCGAGACCTA GACATACTCTGTTTTGAAATGGAGGCTGCTGGGCTTATGGACGAACTGCCATCACTGGTCGTTCGCGGAATTTGT GACTATTGTGATTCTCATAAAAATAAACAGTGGCAAGGATATGCTGCACTTGCGGCTGCTGCGTACACGAAGGCT CTCCTGTCAATAGTTCCCACTTGTTGTCGCAAGGAATCACGTTGCTCGAAGCAGCCAGCTTGGATGGTCCCCTTC CGAAGGAACCCGCGATTCGCAGGCCGGGAAAAAGAAATCATGAGAATTGAAGAATTAATTCTGCAACAGAATGGA AATGACAAAGTTGCTATTTGCGGACTAGGCGGAGTTGGGAAGACCCAGATTGCACTTGAGCTGGCCTACCGCATG CGAGATCGGGACCCCAAATGCTCCATTTTTTGGATCACGTGTACCAGCTATGAGGGCGTGGAACAAGCCTATCTG AAAATTGCCACGATGCTGGAAATGACTGATATAAAGCCAGCAGAGGCGGAAGAAAAAGTCAAAGCTTATCTCAGC CAGGGTGGTGCTGGAAAGTGGCTTCTTCTTTTCGATAATGCAGACGATATGGGGATATGGAACAAGAGCGATATT AATAACTCAGTGCTGATTGACTTCCTTCCTCATAGTGAGCAGGGCCATATCCTCTTCACCACACGCAGCCGCAAG GTAGCTGTAAAACTTGCATCTTCTCATGTGATAACAATTGCTGAGCCGGACAGACAGACTTCTGTCCAGATTCTA CAGAACTCACTGGTTGAAAAGTCCTTGGTAAATGATTGTGATCTAGCTCTTATACTTCTCGAGCAGCTGGCCTTT CTCCCTCTGGCGATCATCCAGGCGGCAGCGTATATAAATGAGAACAGCATCGGCCTCTCTGAACATCTTCAGCTT CTACGGGATCCGGAGCCAGATGTGATTGAACTGCTGAGTGAAGATTTTGGAGATGAAATGCGATACAAAGACATC CAGAATCCTGTTGCTTTGACATGGTTCATCTCATTCCAACAAATTCAACGGTCAAATAAACTCGCGACAGACTAT TTGTCATTCATGGCCTGCGTCAATCCTCGCAATATTCCACAATCCTTACTTCCACAGCCAATCTCTAATAAGAAG AGAATTGAGGCCATTGGCCTCCTCAAGGCCTTCTCCTTCATTATTGAGGAGGGCGAAAACCGTTTCTTTAACCTA CACCGACTAGTCCATCTTGCGACCCGCAACTGGATGAGGGAGAGCCAACAGTTTAGCCAGCAATTACTGAGAACA GCTGATCGATTGGGTGAAGTCTTCCCAAACAACAATCACACAAACCGGCAGATGTGGCGAGAATATCTGCCACAT GCTCTTTCAATAATAGCAGAAGCTGACTTCCGAAAGGAGCAAGAGAAATATATTACTTTTTTCCAAAAAGTCTGT AGGTGTCTGCATAGTGACGGACGATGGAAGGAAGCAGAAGTGCTGGAAATGCAAGTGATGAATATATGCAAGGGA GTGCTGGGGCCAGAACACCCAGCCACTCTCACCAGCATGGGCAACCTGGCATTAATATACTGGGGCCAGGGACGA TGGAAGGAAGCAGAAGAGCTGGGAGTGCAAGTCATACAGCTGTTAAAGATAGTATTGGGACCAGAACATCCAGCC ACTCTTACCACTATGGGCAACCTGGCATCAACATACTGGGATCAGGGACGATGGAAGGAAGCAGAAGAGCTAGGA GTGGAGGTGATGGATATACGCAAGAGAGTGCTGGGGCCAGAACACCCAGCCACTCTTACCAGCATGGGCGACCTG GCATCAACATACCGGAGTCAGGGACAATGGAAGGAAGCAGAAGAGTTGGGAATGCAGGTGATGGATATACGCAAG AGAGTGCTGGGGCCAGAACACCCAAATACCCTTGCCAGCATGGACAACCTGGCATCAATATATCGGAATCAGGAG CGATGGGAAGAAGCAGAAGAGCTAGGTGTGCAAGTCACAGAGCTGTTTATGAGAGTTCTAGGGTTAGAACACCCT CACACTCTCACCAGCATGGAGAATCTAGCCCCTGTATGGGAAAGCCAGAGAAAGTTATAA |