Protein ID | Ani_SJS100_1|g11350.t1 |
Gene name | |
Location | scaffold_196:2071..4062 |
Strand | - |
Gene length (bp) | 1991 |
Transcript length (bp) | 1635 |
Coding sequence length (bp) | 1635 |
Protein length (aa) | 545 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 73 | 95 | 22 |
3 | 108 | 130 | 22 |
4 | 173 | 195 | 22 |
5 | 204 | 221 | 17 |
6 | 231 | 252 | 21 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11350.t1 MSPTLSDLYRRATQIQYVDWYGIWIAALLGVWLLTMLAYQLGRWTVQSHIAASIGRRLGRELPWLLQAIDIATTL EVILVGVLLGANIVLLLVSAHGWADVQQRAAKLAVLNLLLLSTGLTFGLPAHLLGISRSAVGWSHRWVGRVMAAH SLLHGAIAIARAENPIASLRHDWVPLLAAAAVLLMIPVTLHTVVRQHCQVAMKIHYSLAITAMVALAYHTWDQGS ESRWQVVGAGALWIVLSAVAVSHAVFVQQRWSAGRPAVTIRPFHELLRMDITVSSHWHIRPGQYVYLWLPHAGFC SCFQLQPLYVAYWDDAPGPRILYVLTRPRASSLSTRLYLREWLHQRRQPALLLGPYGPSIDFSPFGTIVFIVEDT GILRVLPYIRMLVQASEQRRAMVRKLKIVWQMQDFDHQCWLGDWMQDLLDLDRGEFKILEFRLYYLTKRTSANPG DGFGERIKLCQGPLMAREIAQGHLSKRRGKLAVGVCAGQSIRQPVQDVVQPRTGPDIKLFDLDLEPDHVWEAPCR NKNTATVPASSDSQHMPRT* |
Coding | >Ani_SJS100_1|g11350.t1 ATGTCTCCAACCCTCTCAGACCTGTATAGAAGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGATGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAAAGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATAGACATCGCCACCACTCTC GAAGTGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTTCAGCAACGTGCGGCGAAGCTCGCCGTGCTGAACCTATTGCTGCTCAGTACGGGCCTGACCTTTGGTCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTGCTGTTGGGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTAAGGCATGACTGGGTGCCT TTACTGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATACGGTCGTCCGACAGCACTGTCAGGTG GCCATGAAAATCCACTACTCTCTGGCGATCACGGCAATGGTGGCCCTGGCGTATCATACGTGGGACCAAGGGTCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCCGTCGCCGTCTCCCATGCAGTT TTCGTTCAACAACGCTGGAGTGCTGGACGCCCCGCCGTAACCATACGTCCTTTTCATGAGCTGCTTCGCATGGAC ATTACAGTCTCGTCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCAGGATTTTGC TCGTGCTTCCAACTCCAGCCCCTCTATGTCGCTTACTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTTCTG ACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTACACCAGCGTCGACAGCCCGCA CTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTCATCGTAGAGGACACT GGCATTTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGAGGGCAATGGTACGCAAG TTGAAAATCGTCTGGCAGATGCAAGACTTTGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGGAC CTCGACCGCGGTGAATTCAAGATTCTTGAATTTCGTCTGTATTACCTTACAAAGAGGACATCCGCTAACCCCGGT GATGGGTTCGGAGAACGGATTAAACTGTGTCAAGGGCCACTGATGGCGAGAGAAATCGCCCAAGGTCACCTGAGC AAGCGCCGTGGGAAGCTAGCTGTCGGTGTGTGCGCCGGTCAGTCCATTCGCCAACCGGTCCAGGATGTCGTCCAG CCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGATCATGTCTGGGAGGCTCCTTGTCGC AACAAGAACACCGCCACTGTCCCGGCCTCAAGTGATTCTCAGCACATGCCTAGGACATAA |
Transcript | >Ani_SJS100_1|g11350.t1 ATGTCTCCAACCCTCTCAGACCTGTATAGAAGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGATGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAAAGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATAGACATCGCCACCACTCTC GAAGTGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTTCAGCAACGTGCGGCGAAGCTCGCCGTGCTGAACCTATTGCTGCTCAGTACGGGCCTGACCTTTGGTCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTGCTGTTGGGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTAAGGCATGACTGGGTGCCT TTACTGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATACGGTCGTCCGACAGCACTGTCAGGTG GCCATGAAAATCCACTACTCTCTGGCGATCACGGCAATGGTGGCCCTGGCGTATCATACGTGGGACCAAGGGTCA GAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCCGTCGCCGTCTCCCATGCAGTT TTCGTTCAACAACGCTGGAGTGCTGGACGCCCCGCCGTAACCATACGTCCTTTTCATGAGCTGCTTCGCATGGAC ATTACAGTCTCGTCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCAGGATTTTGC TCGTGCTTCCAACTCCAGCCCCTCTATGTCGCTTACTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTTCTG ACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTACACCAGCGTCGACAGCCCGCA CTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTCATCGTAGAGGACACT GGCATTTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGAGGGCAATGGTACGCAAG TTGAAAATCGTCTGGCAGATGCAAGACTTTGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGGAC CTCGACCGCGGTGAATTCAAGATTCTTGAATTTCGTCTGTATTACCTTACAAAGAGGACATCCGCTAACCCCGGT GATGGGTTCGGAGAACGGATTAAACTGTGTCAAGGGCCACTGATGGCGAGAGAAATCGCCCAAGGTCACCTGAGC AAGCGCCGTGGGAAGCTAGCTGTCGGTGTGTGCGCCGGTCAGTCCATTCGCCAACCGGTCCAGGATGTCGTCCAG CCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGATCATGTCTGGGAGGCTCCTTGTCGC AACAAGAACACCGCCACTGTCCCGGCCTCAAGTGATTCTCAGCACATGCCTAGGACATAA |
Gene | >Ani_SJS100_1|g11350.t1 ATGTCTCCAACCCTCTCAGACCTGTATAGAAGGGCCACCCAAATCCAATACGTTGATTGGTACGGAATATGGATT GCTGCCTTGCTGGGCGTCTGGCTTCTCACGATGTTGGCGTACCAGCTTGGTCGCTGGACTGTCCAAAGCCACATC GCGGCCTCCATTGGACGGCGTCTCGGCCGCGAGTTGCCGTGGCTTCTCCAGGCTATAGACATCGCCACCACTCTC GAAGTGATCTTGGTTGGGGTGCTCCTGGGCGCCAACATTGTCCTCCTACTCGTGTCCGCCCATGGCTGGGCCGAC GTTCAGCAACGTGCGGCGAAGCTCGCCGTGCTGAACCTATTGCTGCTCAGTACGGGCCTGACCTTTGGTCTCCCG GCCCATCTGCTCGGAATCAGCCGCTCTGCTGTTGGGTGGTCGCATCGCTGGGTTGGGCGGGTGATGGCCGCCCAT TCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGAGAACCCGATCGCCTCGCTAAGGCATGACTGGGTGCCT TTACTGGTCAGTCCACCACGCTGCCCCTCGATGATGATGATGATGATCGTTGTGATCCGAGAGCATACCACTAAC CAGAGCTAGGCAGCTGCCGCCGTTCTTCTCATGATCCCCGTGACCTTGCATACGGTCGTCCGACAGCACTGTCAG GTGGCCATGAAAATCCACTACTCTCTGGCGATCACGGCAATGGTGGCCCTGGCGTATCATACGTGGGACCAAGGG TCAGAATCCCGCTGGCAAGTGGTTGGTGCTGGGGCCCTATGGATTGTGCTGAGTGCCGTCGCCGTCTCCCATGCA GTTTTCGTTCAACAACGCTGGAGTGCTGGACGCCCCGCCGTAACCATACGTCCTTTTCATGAGCTGCTTCGCATG GACATTACAGTCTCGTCCCATTGGCACATCCGGCCGGGGCAGTACGTATACCTCTGGTTGCCTCACGCAGGATTT TGCTCGTGCTTCCAACTCCAGCCCCTCTATGTCGCTTACTGGGATGATGCGCCCGGACCGCGCATCCTGTACGTT CTGACCCGACCTCGAGCCTCCAGCCTCAGTACACGACTCTATCTCCGCGAATGGCTACACCAGCGTCGACAGCCC GCACTGTTGCTGGGGCCATACGGCCCATCGATCGACTTTTCTCCGTTTGGGACGATCGTGTTCATCGTAGAGGAC ACTGGCATTTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGAGGGCAATGGTACGC AAGTTGAAAATCGTCTGGCAGATGCAAGACTTTGGTATGGCCGTCTCTCCATGCACTGTCCGAATCCGCAGAGAT CCTAATGAATCCTAGACCACCAATGCTGGCTGGGCGATTGGATGCAGGACCTCTTGGACCTCGACCGCGGTGAAT TCAAGGTAGGTGATAAACCCTCTGCAGCCATCAATAACGCTGCCCTGACTCCAATAGATTCTTGAATTTCGTCTG TATTACCTTACAAAGAGGACATCCGCTAACCCCGGTGATGGGTTCGGAGAACGGATTAAACTGTGTCAAGGGCCA CTGATGGCGAGAGAAATCGCCCAAGGTCACCTGAGCAAGCGCCGTGGGAAGCTAGCTGTCGGTGGTAGGTTTACT TCCCACCCGATCGATTCATCCGTCAACCTACAACGGCTGTGTGATGAGAGCGCTTCTGACAGACCGTGTTGGACG TGCGACTGATGACTAATCTTGGTCCACCCTAGTGTGCGCCGGTCAGTCCATTCGCCAACCGGTCCAGGATGTCGT CCAGCCTCGGACGGGGCCGGATATCAAACTCTTTGACCTCGACCTCGAGCCAGATCATGTCTGGGAGGCTCCTTG TCGCAACAAGAACACCGCCACTGTCCCGGCCTCAAGTGATTCTCAGCAGTGGGTTGCCTCTCGCATAATTGAAGG TTATCGAGAATAACGTGAGTTTCAGCATGCCTAGGACATAA |