© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11325.t1 |
| Gene name | |
| Location | scaffold_189:3275..4713 |
| Strand | - |
| Gene length (bp) | 1438 |
| Transcript length (bp) | 1383 |
| Coding sequence length (bp) | 1383 |
| Protein length (aa) | 461 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.1E-21 | 37 | 281 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.5E-09 | 251 | 426 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.2E-05 | 242 | 427 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 48 | 22 |
| 2 | 72 | 94 | 22 |
| 3 | 101 | 122 | 21 |
| 4 | 132 | 154 | 22 |
| 5 | 159 | 181 | 22 |
| 6 | 191 | 213 | 22 |
| 7 | 315 | 337 | 22 |
| 8 | 352 | 374 | 22 |
| 9 | 386 | 408 | 22 |
| 10 | 423 | 441 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11325.t1 MNAPASAEQHPPTEAPKNKHSRRQYVLIVLSGFMLNFTGCGVVFAYGVYQAEYEKMATQKDTAFTGSSSAEITLI GSLSSAMMKLGAPFVVAWCKCFGPRIIVCVGGLIFGLANILASFGTASWHFQLSQGLLLGIGSCLSYMPSMIVPP TWFSKRRGLALGIISAGTGIGGLVFAPVIQACIDTMGFRDTLRLVGCLSALLICASGAVLVWEPAMEQRLQEEVA AKPSLVSRLFQFPLPPWSLVRQRKFIAQVLNAAFQSAAYYTPIYYISSYGQTLGYSESEGANWTSLSNACNAIGK VAIGYLADYIGRLNSFFLVTLLSAVGAVALWIPSTLLGSTLHDLVAAKGCFIVFTIFYGLFASAYIGLFSPALVE LFGLQEMPRITGIMYMVQGAAGLVGTPVAGVMVRTYNGETTSRSYLDMAIFVSALMVASTMTVAWARMEQGFDRV SGHLTWKWKL* |
| Coding | >Ani_SJS100_1|g11325.t1 ATGAACGCACCAGCCAGTGCCGAACAGCATCCGCCCACAGAGGCTCCCAAGAACAAGCACTCGCGGAGGCAATAT GTCCTCATTGTCCTCTCCGGATTCATGCTCAACTTCACCGGCTGTGGAGTTGTCTTCGCCTACGGAGTTTACCAA GCTGAGTACGAGAAGATGGCCACCCAAAAGGACACTGCATTCACCGGATCCTCATCCGCCGAGATTACATTGATT GGGAGCTTGTCATCAGCCATGATGAAGCTTGGCGCCCCCTTCGTGGTGGCATGGTGCAAGTGTTTTGGTCCTCGC ATTATTGTATGCGTAGGAGGACTTATATTCGGGTTAGCAAATATTCTCGCCAGCTTTGGAACAGCATCCTGGCAT TTTCAACTCTCTCAAGGCCTTCTTCTGGGGATCGGCAGCTGTCTTTCCTACATGCCCTCGATGATCGTACCGCCC ACATGGTTCTCAAAGCGCCGCGGACTCGCCCTTGGCATTATCTCTGCGGGAACCGGTATTGGCGGTCTGGTCTTC GCCCCTGTCATCCAGGCCTGTATCGATACTATGGGTTTCCGTGATACACTCCGCTTGGTGGGTTGCTTGTCAGCA CTGCTCATTTGTGCTTCGGGTGCTGTGCTGGTATGGGAGCCCGCTATGGAGCAACGCTTGCAGGAGGAAGTAGCA GCCAAGCCCTCCTTAGTGTCTCGACTATTCCAGTTCCCACTGCCTCCTTGGTCTCTGGTCCGCCAGCGCAAATTC ATCGCACAGGTGCTCAACGCAGCCTTTCAGAGCGCAGCCTACTACACGCCCATCTACTACATCTCGTCGTACGGA CAGACGTTGGGCTACAGCGAGTCCGAGGGAGCCAACTGGACCTCTCTCAGCAATGCGTGCAATGCCATCGGTAAG GTCGCCATCGGGTACCTGGCTGACTATATTGGGCGATTGAATTCCTTCTTCCTGGTCACTCTTCTCAGTGCTGTG GGTGCGGTGGCACTCTGGATCCCCAGTACCTTGCTTGGGTCCACGTTGCATGACCTGGTGGCGGCCAAGGGCTGC TTCATTGTTTTCACCATTTTCTACGGTCTCTTCGCTAGTGCCTATATTGGGCTGTTCTCGCCGGCTCTCGTGGAA CTCTTTGGTTTGCAGGAGATGCCCCGTATCACGGGTATCATGTACATGGTGCAGGGAGCGGCTGGGTTGGTGGGC ACCCCGGTGGCTGGAGTCATGGTACGCACGTACAATGGCGAGACTACCTCGCGTAGCTATTTGGATATGGCTATC TTTGTCAGTGCGTTGATGGTGGCATCTACCATGACGGTTGCCTGGGCACGAATGGAACAGGGATTCGACCGTGTT AGTGGCCATCTTACCTGGAAGTGGAAGCTCTAG |
| Transcript | >Ani_SJS100_1|g11325.t1 ATGAACGCACCAGCCAGTGCCGAACAGCATCCGCCCACAGAGGCTCCCAAGAACAAGCACTCGCGGAGGCAATAT GTCCTCATTGTCCTCTCCGGATTCATGCTCAACTTCACCGGCTGTGGAGTTGTCTTCGCCTACGGAGTTTACCAA GCTGAGTACGAGAAGATGGCCACCCAAAAGGACACTGCATTCACCGGATCCTCATCCGCCGAGATTACATTGATT GGGAGCTTGTCATCAGCCATGATGAAGCTTGGCGCCCCCTTCGTGGTGGCATGGTGCAAGTGTTTTGGTCCTCGC ATTATTGTATGCGTAGGAGGACTTATATTCGGGTTAGCAAATATTCTCGCCAGCTTTGGAACAGCATCCTGGCAT TTTCAACTCTCTCAAGGCCTTCTTCTGGGGATCGGCAGCTGTCTTTCCTACATGCCCTCGATGATCGTACCGCCC ACATGGTTCTCAAAGCGCCGCGGACTCGCCCTTGGCATTATCTCTGCGGGAACCGGTATTGGCGGTCTGGTCTTC GCCCCTGTCATCCAGGCCTGTATCGATACTATGGGTTTCCGTGATACACTCCGCTTGGTGGGTTGCTTGTCAGCA CTGCTCATTTGTGCTTCGGGTGCTGTGCTGGTATGGGAGCCCGCTATGGAGCAACGCTTGCAGGAGGAAGTAGCA GCCAAGCCCTCCTTAGTGTCTCGACTATTCCAGTTCCCACTGCCTCCTTGGTCTCTGGTCCGCCAGCGCAAATTC ATCGCACAGGTGCTCAACGCAGCCTTTCAGAGCGCAGCCTACTACACGCCCATCTACTACATCTCGTCGTACGGA CAGACGTTGGGCTACAGCGAGTCCGAGGGAGCCAACTGGACCTCTCTCAGCAATGCGTGCAATGCCATCGGTAAG GTCGCCATCGGGTACCTGGCTGACTATATTGGGCGATTGAATTCCTTCTTCCTGGTCACTCTTCTCAGTGCTGTG GGTGCGGTGGCACTCTGGATCCCCAGTACCTTGCTTGGGTCCACGTTGCATGACCTGGTGGCGGCCAAGGGCTGC TTCATTGTTTTCACCATTTTCTACGGTCTCTTCGCTAGTGCCTATATTGGGCTGTTCTCGCCGGCTCTCGTGGAA CTCTTTGGTTTGCAGGAGATGCCCCGTATCACGGGTATCATGTACATGGTGCAGGGAGCGGCTGGGTTGGTGGGC ACCCCGGTGGCTGGAGTCATGGTACGCACGTACAATGGCGAGACTACCTCGCGTAGCTATTTGGATATGGCTATC TTTGTCAGTGCGTTGATGGTGGCATCTACCATGACGGTTGCCTGGGCACGAATGGAACAGGGATTCGACCGTGTT AGTGGCCATCTTACCTGGAAGTGGAAGCTCTAG |
| Gene | >Ani_SJS100_1|g11325.t1 ATGAACGCACCAGCCAGTGCCGAACAGCATCCGCCCACAGAGGCTCCCAAGAACAAGCACTCGCGGAGGTACGGC AACCTTACAACTGCTAGTATTGCCCTCGGCTCCTTCTGACCTGCTTAGGCAATATGTCCTCATTGTCCTCTCCGG ATTCATGCTCAACTTCACCGGCTGTGGAGTTGTCTTCGCCTACGGAGTTTACCAAGCTGAGTACGAGAAGATGGC CACCCAAAAGGACACTGCATTCACCGGATCCTCATCCGCCGAGATTACATTGATTGGGAGCTTGTCATCAGCCAT GATGAAGCTTGGCGCCCCCTTCGTGGTGGCATGGTGCAAGTGTTTTGGTCCTCGCATTATTGTATGCGTAGGAGG ACTTATATTCGGGTTAGCAAATATTCTCGCCAGCTTTGGAACAGCATCCTGGCATTTTCAACTCTCTCAAGGCCT TCTTCTGGGGATCGGCAGCTGTCTTTCCTACATGCCCTCGATGATCGTACCGCCCACATGGTTCTCAAAGCGCCG CGGACTCGCCCTTGGCATTATCTCTGCGGGAACCGGTATTGGCGGTCTGGTCTTCGCCCCTGTCATCCAGGCCTG TATCGATACTATGGGTTTCCGTGATACACTCCGCTTGGTGGGTTGCTTGTCAGCACTGCTCATTTGTGCTTCGGG TGCTGTGCTGGTATGGGAGCCCGCTATGGAGCAACGCTTGCAGGAGGAAGTAGCAGCCAAGCCCTCCTTAGTGTC TCGACTATTCCAGTTCCCACTGCCTCCTTGGTCTCTGGTCCGCCAGCGCAAATTCATCGCACAGGTGCTCAACGC AGCCTTTCAGAGCGCAGCCTACTACACGCCCATCTACTACATCTCGTCGTACGGACAGACGTTGGGCTACAGCGA GTCCGAGGGAGCCAACTGGACCTCTCTCAGCAATGCGTGCAATGCCATCGGTAAGGTCGCCATCGGGTACCTGGC TGACTATATTGGGCGATTGAATTCCTTCTTCCTGGTCACTCTTCTCAGTGCTGTGGGTGCGGTGGCACTCTGGAT CCCCAGTACCTTGCTTGGGTCCACGTTGCATGACCTGGTGGCGGCCAAGGGCTGCTTCATTGTTTTCACCATTTT CTACGGTCTCTTCGCTAGTGCCTATATTGGGCTGTTCTCGCCGGCTCTCGTGGAACTCTTTGGTTTGCAGGAGAT GCCCCGTATCACGGGTATCATGTACATGGTGCAGGGAGCGGCTGGGTTGGTGGGCACCCCGGTGGCTGGAGTCAT GGTACGCACGTACAATGGCGAGACTACCTCGCGTAGCTATTTGGATATGGCTATCTTTGTCAGTGCGTTGATGGT GGCATCTACCATGACGGTTGCCTGGGCACGAATGGAACAGGGATTCGACCGTGTTAGTGGCCATCTTACCTGGAA GTGGAAGCTCTAG |