Protein ID | Ani_SJS100_1|g11323.t1 |
Gene name | |
Location | scaffold_188:13198..15447 |
Strand | + |
Gene length (bp) | 2249 |
Transcript length (bp) | 2070 |
Coding sequence length (bp) | 2070 |
Protein length (aa) | 690 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 5.0E-22 | 321 | 496 |
PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 7.7E-11 | 320 | 503 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11323.t1 MILRTEAGLVAESISRPTDDRDWSYLQFFDHIQRFVRMKWVSGSLYECVYLPGHPSLSASNADDGSYHSRDLFVQ HPTHPKRWKYVARRDDRVTLINGEKVLPLPIEGIIRQHPLVDEAVVVGVQKAEPGLLIFRAAAAQDTPAEQVLDH IWPTVEEANARAEQFSRISRAMVIVLPAGAACPRTDKGSIIRPQVYNDFKDDISKMYSRCHDGSGALQLSVDDIA AHLLKRCQNELRLPVSTVHEDLYSHDVDSLQAIQLRRKICRLQVRRRRNRPTEPGHGQDTQHEDEQALARDWVEQ YSSFSGTPGSGARLNEKAAILTGATGSIGAHLLRTLLADETITTVYCLTRQPNPHDALFANLRRKQITIPPAWAE RIVALQSDLAQSDLGVADKLMRQMKRSVSLIIHVAWPVNFTLPLPSFEPHVKGLHNLISSSLSVDAPVPAVLLFC SSVSTALASPAPEIEEIPMEPNCALEMGYSRSKFVGEQLVSRAREAGAHAYAEAIPLMVRSALTLGALPDLDISC SWPPVDHLAACLQEIADACLARREAGITLSHRDDSVYNVVNPRWFTWSVLLEELRRHGLAFRTVSVSEWLRLLEK SKARGEETANPAVKLMDHYRTTYGQGSASTQKSFLTRNAERDSKTLKGKSAMIIEDGILGRYAHDWLRRWGGAIS RNPTEENFGVQNRL* |
Coding | >Ani_SJS100_1|g11323.t1 ATGATTTTAAGAACCGAGGCAGGTTTGGTGGCCGAGTCCATCTCGCGCCCGACGGACGACCGCGATTGGAGCTAT CTGCAATTCTTCGACCATATTCAGCGGTTCGTCCGAATGAAGTGGGTGAGCGGCTCGTTGTACGAGTGCGTCTAC CTGCCTGGCCACCCGAGCCTCAGCGCCTCCAACGCGGACGACGGCTCCTACCATTCGCGGGACCTTTTCGTCCAG CACCCGACACACCCGAAGCGGTGGAAGTATGTCGCCCGCCGCGACGACCGTGTCACACTCATCAACGGTGAAAAG GTGCTACCGCTTCCCATCGAAGGCATCATCCGCCAACATCCCCTCGTCGACGAGGCCGTCGTGGTAGGCGTGCAG AAAGCTGAACCGGGGCTGTTGATCTTCCGCGCAGCCGCCGCCCAAGATACCCCAGCCGAGCAAGTTCTCGACCAC ATCTGGCCCACGGTGGAAGAGGCCAACGCCCGGGCGGAACAGTTTTCGCGCATCTCGCGGGCGATGGTCATCGTG CTGCCGGCAGGGGCGGCCTGCCCGCGGACCGACAAAGGATCGATTATCCGGCCGCAGGTATACAACGACTTTAAA GACGACATCAGCAAGATGTACAGCCGTTGCCACGACGGGTCTGGTGCGCTGCAGTTAAGTGTGGACGACATCGCA GCCCATCTGTTGAAGCGTTGCCAGAACGAACTCCGCCTTCCGGTCAGCACAGTCCACGAGGACTTGTACTCCCAC GACGTGGACAGTCTTCAGGCGATCCAACTGCGACGAAAGATCTGCAGACTTCAAGTTCGCCGACGCCGCAACCGT CCCACAGAACCTGGTCACGGTCAGGACACGCAGCACGAGGATGAACAGGCCTTGGCGCGCGACTGGGTCGAGCAA TACTCCTCCTTCTCTGGCACCCCAGGCTCGGGTGCTCGATTGAACGAGAAAGCAGCAATCTTGACCGGCGCCACC GGATCGATCGGCGCGCATCTGCTCCGAACCTTGCTGGCGGATGAGACTATCACCACCGTGTACTGTCTGACCAGA CAGCCGAACCCGCACGACGCGCTCTTCGCCAACCTCCGCCGGAAACAGATTACTATCCCGCCCGCCTGGGCCGAA CGGATTGTCGCGCTGCAGAGTGATCTCGCACAAAGCGATCTCGGCGTCGCCGACAAACTCATGCGCCAGATGAAG CGATCGGTGTCCCTCATCATCCATGTCGCCTGGCCGGTGAACTTTACGCTGCCACTCCCGAGCTTCGAGCCGCAC GTCAAAGGCCTTCACAATTTGATCAGTTCCTCCCTGTCCGTCGACGCGCCGGTCCCCGCGGTGCTCCTCTTCTGC TCCTCCGTCTCTACCGCGCTCGCCTCGCCTGCGCCCGAGATCGAAGAGATCCCGATGGAGCCGAATTGCGCGCTG GAGATGGGGTACAGCCGCTCCAAATTTGTCGGGGAACAGCTAGTCAGCCGCGCTCGGGAAGCAGGAGCCCATGCT TATGCCGAAGCCATTCCCTTGATGGTCCGGTCCGCCCTGACGCTGGGGGCATTGCCGGATCTGGATATCTCGTGC TCCTGGCCGCCAGTGGATCACCTCGCCGCCTGTCTGCAGGAGATCGCTGACGCGTGTCTCGCTCGCCGCGAGGCT GGAATTACCCTCAGCCACCGTGACGACAGCGTCTACAACGTGGTGAACCCTCGATGGTTCACCTGGTCGGTCCTG TTGGAGGAACTCAGACGTCATGGACTGGCGTTTCGAACCGTGTCGGTGAGTGAATGGTTGCGCTTGCTGGAAAAG AGCAAAGCTCGCGGGGAGGAGACGGCCAACCCGGCCGTCAAATTGATGGACCACTATCGGACAACATACGGTCAG GGGTCAGCGTCGACGCAGAAAAGCTTCCTCACAAGGAACGCCGAGCGAGACAGCAAAACACTCAAGGGAAAATCG GCCATGATCATCGAAGATGGCATCCTCGGCCGGTATGCGCACGACTGGCTTCGTCGTTGGGGAGGGGCAATTAGT CGCAACCCCACTGAGGAGAATTTTGGAGTTCAGAATCGTCTGTGA |
Transcript | >Ani_SJS100_1|g11323.t1 ATGATTTTAAGAACCGAGGCAGGTTTGGTGGCCGAGTCCATCTCGCGCCCGACGGACGACCGCGATTGGAGCTAT CTGCAATTCTTCGACCATATTCAGCGGTTCGTCCGAATGAAGTGGGTGAGCGGCTCGTTGTACGAGTGCGTCTAC CTGCCTGGCCACCCGAGCCTCAGCGCCTCCAACGCGGACGACGGCTCCTACCATTCGCGGGACCTTTTCGTCCAG CACCCGACACACCCGAAGCGGTGGAAGTATGTCGCCCGCCGCGACGACCGTGTCACACTCATCAACGGTGAAAAG GTGCTACCGCTTCCCATCGAAGGCATCATCCGCCAACATCCCCTCGTCGACGAGGCCGTCGTGGTAGGCGTGCAG AAAGCTGAACCGGGGCTGTTGATCTTCCGCGCAGCCGCCGCCCAAGATACCCCAGCCGAGCAAGTTCTCGACCAC ATCTGGCCCACGGTGGAAGAGGCCAACGCCCGGGCGGAACAGTTTTCGCGCATCTCGCGGGCGATGGTCATCGTG CTGCCGGCAGGGGCGGCCTGCCCGCGGACCGACAAAGGATCGATTATCCGGCCGCAGGTATACAACGACTTTAAA GACGACATCAGCAAGATGTACAGCCGTTGCCACGACGGGTCTGGTGCGCTGCAGTTAAGTGTGGACGACATCGCA GCCCATCTGTTGAAGCGTTGCCAGAACGAACTCCGCCTTCCGGTCAGCACAGTCCACGAGGACTTGTACTCCCAC GACGTGGACAGTCTTCAGGCGATCCAACTGCGACGAAAGATCTGCAGACTTCAAGTTCGCCGACGCCGCAACCGT CCCACAGAACCTGGTCACGGTCAGGACACGCAGCACGAGGATGAACAGGCCTTGGCGCGCGACTGGGTCGAGCAA TACTCCTCCTTCTCTGGCACCCCAGGCTCGGGTGCTCGATTGAACGAGAAAGCAGCAATCTTGACCGGCGCCACC GGATCGATCGGCGCGCATCTGCTCCGAACCTTGCTGGCGGATGAGACTATCACCACCGTGTACTGTCTGACCAGA CAGCCGAACCCGCACGACGCGCTCTTCGCCAACCTCCGCCGGAAACAGATTACTATCCCGCCCGCCTGGGCCGAA CGGATTGTCGCGCTGCAGAGTGATCTCGCACAAAGCGATCTCGGCGTCGCCGACAAACTCATGCGCCAGATGAAG CGATCGGTGTCCCTCATCATCCATGTCGCCTGGCCGGTGAACTTTACGCTGCCACTCCCGAGCTTCGAGCCGCAC GTCAAAGGCCTTCACAATTTGATCAGTTCCTCCCTGTCCGTCGACGCGCCGGTCCCCGCGGTGCTCCTCTTCTGC TCCTCCGTCTCTACCGCGCTCGCCTCGCCTGCGCCCGAGATCGAAGAGATCCCGATGGAGCCGAATTGCGCGCTG GAGATGGGGTACAGCCGCTCCAAATTTGTCGGGGAACAGCTAGTCAGCCGCGCTCGGGAAGCAGGAGCCCATGCT TATGCCGAAGCCATTCCCTTGATGGTCCGGTCCGCCCTGACGCTGGGGGCATTGCCGGATCTGGATATCTCGTGC TCCTGGCCGCCAGTGGATCACCTCGCCGCCTGTCTGCAGGAGATCGCTGACGCGTGTCTCGCTCGCCGCGAGGCT GGAATTACCCTCAGCCACCGTGACGACAGCGTCTACAACGTGGTGAACCCTCGATGGTTCACCTGGTCGGTCCTG TTGGAGGAACTCAGACGTCATGGACTGGCGTTTCGAACCGTGTCGGTGAGTGAATGGTTGCGCTTGCTGGAAAAG AGCAAAGCTCGCGGGGAGGAGACGGCCAACCCGGCCGTCAAATTGATGGACCACTATCGGACAACATACGGTCAG GGGTCAGCGTCGACGCAGAAAAGCTTCCTCACAAGGAACGCCGAGCGAGACAGCAAAACACTCAAGGGAAAATCG GCCATGATCATCGAAGATGGCATCCTCGGCCGGTATGCGCACGACTGGCTTCGTCGTTGGGGAGGGGCAATTAGT CGCAACCCCACTGAGGAGAATTTTGGAGTTCAGAATCGTCTGTGA |
Gene | >Ani_SJS100_1|g11323.t1 ATGATTTTAAGAACCGAGGCAGGTTTGGTGGCCGAGTCCATCTCGCGCCCGACGGACGACCGCGATTGGAGCTAT CTGCAATTCTTCGACCATATTCAGCGGTTCGTCCGAATGAAGTGGGTGAGCGGCTCGTTGTACGAGTGCGTCTAC CTGCCTGGCCACCCGAGCCTCAGCGCCTCCAACGCGGACGACGGCTCCTACCATTCGCGGGACCTTTTCGTCCAG CACCCGACACACCCGAAGCGGTGGAAGTATGTCGCCCGCCGCGACGACCGTGTCACACTCATCAACGGTGAAAAG GTGCTACCGCTTCCCATCGAAGGCATCATCCGCCAACATCCCCTCGTCGACGAGGCCGTCGTGGTAGGCGTGCAG AAAGCTGAACCGGGGCTGTTGATCTTCCGCGCAGCCGCCGCCCAAGATACCCCAGCCGAGCAAGTTCTCGACCAC ATCTGGCCCACGGTGGAAGAGGCCAACGCCCGGGCGGAACAGTTTTCGCGCATCTCGCGGGCGATGGTCATCGTG CTGCCGGCAGGGGCGGCCTGCCCGCGGACCGACAAAGGATCGATTATCCGGCCGCAGGTATACAACGACTTTAAA GACGACATCAGCAAGATGTACAGCCGTTGCCACGACGGGTCTGGTGCGCTGCAGTTAAGTGTGGACGACATCGCA GCCCATCTGTTGAAGCGTTGCCAGAACGAACTCCGCCTTCCGGTCAGCACAGTCCACGAGGACTTGTACTCCCAC GACGTGGACAGTCTTCAGGCGATCCAACTGCGACGAAAGATCTGCAGACTTCAAGTTCGCCGACGCCGCAACCGT CCCACAGAACCTGGTGTACGATGCGGGGAACATCTCTCGGCTGGCGAAGCTGATCTATGCCATCCAGCACGGTCA GGACACGCAGCACGAGGATGAACAGGCCTTGGCGCGCGACTGGGTCGAGCAATACTCCTCCTTCTCTGGCACCCC AGGCTCGGGTGCTCGATTGAACGAGAAAGCAGCAGTACGTTGGCTTATCCAGACGCATCGAAGCCGTACTAGGCT GTCCACTTTCGCACATCTACTGACCCAGGCAGATCTTGACCGGCGCCACCGGATCGATCGGCGCGCATCTGCTCC GAACCTTGCTGGCGGATGAGACTATCACCACCGTGTACTGTCTGACCAGACAGCCGAACCCGCACGACGCGCTCT TCGCCAACCTCCGCCGGAAACAGATTACTATCCCGCCCGCCTGGGCCGAACGGATTGTCGCGCTGCAGAGTGATC TCGCACAAAGCGATCTCGGCGTCGCCGACAAACTCATGCGCCAGATGAAGCGATCGGTGTCCCTCATCATCCATG TCGCCTGGCCGGTGAACTTTACGCTGCCACTCCCGAGCTTCGAGCCGCACGTCAAAGGCCTTCACAATTTGATCA GTTCCTCCCTGTCCGTCGACGCGCCGGTCCCCGCGGTGCTCCTCTTCTGCTCCTCCGTCTCTACCGCGCTCGCCT CGCCTGCGCCCGAGATCGAAGAGATCCCGATGGAGCCGAATTGCGCGCTGGAGATGGGGTACAGCCGCTCCAAAT TTGTCGGGGAACAGCTAGTCAGCCGCGCTCGGGAAGCAGGAGCCCATGCTTATGCCGTGCGGATCGGCCAGGTCT CGGGCCATTCAGAAAGAGGCCTGTGGAATGACTAGGAAGCCATTCCCTTGATGGTCCGGTCCGCCCTGACGCTGG GGGCATTGCCGGATCTGGATATCTCGTGCTCCTGGCCGCCAGTGGATCACCTCGCCGCCTGTCTGCAGGAGATCG CTGACGCGTGTCTCGCTCGCCGCGAGGCTGGAATTACCCTCAGCCACCGTGACGACAGCGTCTACAACGTGGTGA ACCCTCGATGGTTCACCTGGTCGGTCCTGTTGGAGGAACTCAGACGTCATGGACTGGCGTTTCGAACCGTGTCGG TGAGTGAATGGTTGCGCTTGCTGGAAAAGAGCAAAGCTCGCGGGGAGGAGACGGCCAACCCGGCCGTCAAATTGA TGGACCACTATCGGACAACATACGGTCAGGGGTCAGCGTCGACGCAGAAAAGCTTCCTCACAAGGAACGCCGAGC GAGACAGCAAAACACTCAAGGGAAAATCGGCCATGATCATCGAAGATGGCATCCTCGGCCGGTATGCGCACGACT GGCTTCGTCGTTGGGGAGGGGCAATTAGTCGCAACCCCACTGAGGAGAATTTTGGAGTTCAGAATCGTCTGTGA |