Protein ID | Ani_SJS100_1|g11269.t1 |
Gene name | |
Location | scaffold_179:10287..12038 |
Strand | + |
Gene length (bp) | 1751 |
Transcript length (bp) | 1698 |
Coding sequence length (bp) | 1698 |
Protein length (aa) | 566 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13432 | TPR_16 | Tetratricopeptide repeat | 1.4E-02 | 377 | 452 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11269.t1 MLKSSNLDEMPYFNLGSHHRPVTTTSKEAQLWFDRGLIWSYSFNHGEAERCFERAATYDPSCAMALWGLAYAAGP NYNKAWKFFDQEDLRDSIKRANNALARATELANQASPVEQALIKAITARFPPTDSIPDDLSSLDYAYANAMRPVY QRFGRDPDVAALFAEALMCITPRGLWDLDTGKPTGVHTVEAREAIEVALKHPNGYDHPALCHLHIHMLEMSPFPE LALPAADRLRRLVPDGSHMLHMPTHIDAAVGDYRRSVDSNHEAILADDKYFAREDASIQYVAYRVHYICAKLYAA MMSGRFIDAITAAEKLEHIIDAKLLSIKSPPIADFNESFLGSKAHVLVRFGRWEEILGLQLPADRRLYCVTTAII LYAQGLAFSALGRITEAEAAQKEFEAARAVVPTSRLNSIPCKEVDVLRVASSMLTGELEYRKGNYDTAFSTLREA IKLEDGLPYSDPPPWMQPVRHALGGLLLEQNRIDEAEVVFREDLGMARDFPRRRAKLNNVWGLHGLYECFTRAGK IEEALFIKSSRDIAIASADVPVTTSCYCRRSAVEKIECCA* |
Coding | >Ani_SJS100_1|g11269.t1 ATGCTGAAATCGTCCAATCTCGACGAAATGCCTTACTTCAACCTTGGCTCACACCATCGGCCAGTGACCACTACT TCAAAAGAGGCTCAGCTGTGGTTTGACCGTGGTTTGATATGGTCATATTCATTCAACCATGGCGAGGCTGAGCGA TGCTTTGAGAGAGCTGCTACATATGATCCGAGTTGTGCGATGGCATTATGGGGTCTTGCATATGCGGCTGGACCA AATTACAACAAGGCGTGGAAATTCTTCGATCAAGAGGACCTTCGGGATTCAATCAAAAGAGCGAACAATGCCTTA GCCCGTGCCACTGAGCTAGCGAACCAGGCGAGTCCTGTTGAACAAGCTTTGATTAAGGCAATAACCGCGCGCTTC CCGCCTACTGACAGTATTCCTGACGACCTGAGCTCCTTGGACTACGCTTACGCGAATGCGATGCGCCCTGTTTAT CAACGATTTGGCCGTGACCCAGATGTAGCGGCTTTATTTGCTGAAGCCCTTATGTGCATTACCCCTCGGGGTCTG TGGGATTTGGATACTGGGAAACCAACTGGCGTTCACACAGTCGAGGCTCGAGAAGCTATCGAGGTGGCGTTAAAG CATCCTAACGGTTATGACCACCCGGCTCTGTGTCATCTCCACATTCACATGTTAGAGATGTCTCCGTTCCCGGAG TTGGCACTCCCTGCCGCAGATCGACTGCGTCGCCTGGTCCCCGACGGTTCGCATATGCTGCACATGCCGACACAC ATTGATGCCGCAGTTGGCGACTATCGCCGCTCAGTCGACTCCAACCATGAAGCAATCCTTGCGGACGACAAGTAC TTCGCTCGGGAGGATGCTTCCATCCAGTATGTGGCGTATAGGGTACACTATATCTGCGCAAAGCTGTACGCTGCT ATGATGTCCGGCCGCTTTATAGACGCCATTACAGCTGCAGAGAAGCTCGAGCATATAATCGATGCCAAGTTGCTA TCGATCAAGTCCCCACCCATAGCGGACTTCAATGAAAGTTTCCTTGGCAGTAAAGCACATGTTCTGGTGCGCTTT GGCCGCTGGGAGGAAATTCTTGGTCTTCAGCTACCTGCTGACCGCAGATTGTACTGCGTGACCACAGCGATTATT CTCTATGCGCAGGGGCTTGCCTTTAGCGCACTTGGTCGAATTACGGAGGCCGAGGCTGCTCAGAAAGAGTTCGAA GCAGCACGGGCAGTCGTCCCAACTTCACGTCTTAACAGCATACCGTGTAAGGAGGTTGATGTGCTTCGAGTTGCA TCATCAATGCTCACTGGTGAGCTCGAATATCGCAAAGGGAATTACGATACTGCCTTTTCTACCCTTCGGGAAGCT ATAAAGCTTGAAGACGGACTTCCGTATTCCGACCCGCCACCTTGGATGCAGCCTGTTCGCCACGCTCTGGGAGGC TTGCTGCTCGAGCAAAACCGTATTGATGAGGCAGAAGTGGTGTTTCGAGAGGATCTTGGTATGGCTAGGGACTTT CCGCGTCGGCGTGCGAAGCTTAATAATGTGTGGGGACTCCACGGGCTTTATGAATGTTTTACGCGCGCTGGCAAG ATTGAAGAAGCCCTCTTCATCAAATCATCACGTGATATTGCCATAGCCTCAGCTGATGTCCCCGTTACTACTTCA TGCTATTGCCGCAGATCTGCAGTGGAAAAGATTGAGTGCTGTGCATGA |
Transcript | >Ani_SJS100_1|g11269.t1 ATGCTGAAATCGTCCAATCTCGACGAAATGCCTTACTTCAACCTTGGCTCACACCATCGGCCAGTGACCACTACT TCAAAAGAGGCTCAGCTGTGGTTTGACCGTGGTTTGATATGGTCATATTCATTCAACCATGGCGAGGCTGAGCGA TGCTTTGAGAGAGCTGCTACATATGATCCGAGTTGTGCGATGGCATTATGGGGTCTTGCATATGCGGCTGGACCA AATTACAACAAGGCGTGGAAATTCTTCGATCAAGAGGACCTTCGGGATTCAATCAAAAGAGCGAACAATGCCTTA GCCCGTGCCACTGAGCTAGCGAACCAGGCGAGTCCTGTTGAACAAGCTTTGATTAAGGCAATAACCGCGCGCTTC CCGCCTACTGACAGTATTCCTGACGACCTGAGCTCCTTGGACTACGCTTACGCGAATGCGATGCGCCCTGTTTAT CAACGATTTGGCCGTGACCCAGATGTAGCGGCTTTATTTGCTGAAGCCCTTATGTGCATTACCCCTCGGGGTCTG TGGGATTTGGATACTGGGAAACCAACTGGCGTTCACACAGTCGAGGCTCGAGAAGCTATCGAGGTGGCGTTAAAG CATCCTAACGGTTATGACCACCCGGCTCTGTGTCATCTCCACATTCACATGTTAGAGATGTCTCCGTTCCCGGAG TTGGCACTCCCTGCCGCAGATCGACTGCGTCGCCTGGTCCCCGACGGTTCGCATATGCTGCACATGCCGACACAC ATTGATGCCGCAGTTGGCGACTATCGCCGCTCAGTCGACTCCAACCATGAAGCAATCCTTGCGGACGACAAGTAC TTCGCTCGGGAGGATGCTTCCATCCAGTATGTGGCGTATAGGGTACACTATATCTGCGCAAAGCTGTACGCTGCT ATGATGTCCGGCCGCTTTATAGACGCCATTACAGCTGCAGAGAAGCTCGAGCATATAATCGATGCCAAGTTGCTA TCGATCAAGTCCCCACCCATAGCGGACTTCAATGAAAGTTTCCTTGGCAGTAAAGCACATGTTCTGGTGCGCTTT GGCCGCTGGGAGGAAATTCTTGGTCTTCAGCTACCTGCTGACCGCAGATTGTACTGCGTGACCACAGCGATTATT CTCTATGCGCAGGGGCTTGCCTTTAGCGCACTTGGTCGAATTACGGAGGCCGAGGCTGCTCAGAAAGAGTTCGAA GCAGCACGGGCAGTCGTCCCAACTTCACGTCTTAACAGCATACCGTGTAAGGAGGTTGATGTGCTTCGAGTTGCA TCATCAATGCTCACTGGTGAGCTCGAATATCGCAAAGGGAATTACGATACTGCCTTTTCTACCCTTCGGGAAGCT ATAAAGCTTGAAGACGGACTTCCGTATTCCGACCCGCCACCTTGGATGCAGCCTGTTCGCCACGCTCTGGGAGGC TTGCTGCTCGAGCAAAACCGTATTGATGAGGCAGAAGTGGTGTTTCGAGAGGATCTTGGTATGGCTAGGGACTTT CCGCGTCGGCGTGCGAAGCTTAATAATGTGTGGGGACTCCACGGGCTTTATGAATGTTTTACGCGCGCTGGCAAG ATTGAAGAAGCCCTCTTCATCAAATCATCACGTGATATTGCCATAGCCTCAGCTGATGTCCCCGTTACTACTTCA TGCTATTGCCGCAGATCTGCAGTGGAAAAGATTGAGTGCTGTGCATGA |
Gene | >Ani_SJS100_1|g11269.t1 ATGCTGTGAGTTTATGCTATTCGTCAACCTTTATATATACTATCTGACGCTCACGCAGGAAATCGTCCAATCTCG ACGAAATGCCTTACTTCAACCTTGGCTCACACCATCGGCCAGTGACCACTACTTCAAAAGAGGCTCAGCTGTGGT TTGACCGTGGTTTGATATGGTCATATTCATTCAACCATGGCGAGGCTGAGCGATGCTTTGAGAGAGCTGCTACAT ATGATCCGAGTTGTGCGATGGCATTATGGGGTCTTGCATATGCGGCTGGACCAAATTACAACAAGGCGTGGAAAT TCTTCGATCAAGAGGACCTTCGGGATTCAATCAAAAGAGCGAACAATGCCTTAGCCCGTGCCACTGAGCTAGCGA ACCAGGCGAGTCCTGTTGAACAAGCTTTGATTAAGGCAATAACCGCGCGCTTCCCGCCTACTGACAGTATTCCTG ACGACCTGAGCTCCTTGGACTACGCTTACGCGAATGCGATGCGCCCTGTTTATCAACGATTTGGCCGTGACCCAG ATGTAGCGGCTTTATTTGCTGAAGCCCTTATGTGCATTACCCCTCGGGGTCTGTGGGATTTGGATACTGGGAAAC CAACTGGCGTTCACACAGTCGAGGCTCGAGAAGCTATCGAGGTGGCGTTAAAGCATCCTAACGGTTATGACCACC CGGCTCTGTGTCATCTCCACATTCACATGTTAGAGATGTCTCCGTTCCCGGAGTTGGCACTCCCTGCCGCAGATC GACTGCGTCGCCTGGTCCCCGACGGTTCGCATATGCTGCACATGCCGACACACATTGATGCCGCAGTTGGCGACT ATCGCCGCTCAGTCGACTCCAACCATGAAGCAATCCTTGCGGACGACAAGTACTTCGCTCGGGAGGATGCTTCCA TCCAGTATGTGGCGTATAGGGTACACTATATCTGCGCAAAGCTGTACGCTGCTATGATGTCCGGCCGCTTTATAG ACGCCATTACAGCTGCAGAGAAGCTCGAGCATATAATCGATGCCAAGTTGCTATCGATCAAGTCCCCACCCATAG CGGACTTCAATGAAAGTTTCCTTGGCAGTAAAGCACATGTTCTGGTGCGCTTTGGCCGCTGGGAGGAAATTCTTG GTCTTCAGCTACCTGCTGACCGCAGATTGTACTGCGTGACCACAGCGATTATTCTCTATGCGCAGGGGCTTGCCT TTAGCGCACTTGGTCGAATTACGGAGGCCGAGGCTGCTCAGAAAGAGTTCGAAGCAGCACGGGCAGTCGTCCCAA CTTCACGTCTTAACAGCATACCGTGTAAGGAGGTTGATGTGCTTCGAGTTGCATCATCAATGCTCACTGGTGAGC TCGAATATCGCAAAGGGAATTACGATACTGCCTTTTCTACCCTTCGGGAAGCTATAAAGCTTGAAGACGGACTTC CGTATTCCGACCCGCCACCTTGGATGCAGCCTGTTCGCCACGCTCTGGGAGGCTTGCTGCTCGAGCAAAACCGTA TTGATGAGGCAGAAGTGGTGTTTCGAGAGGATCTTGGTATGGCTAGGGACTTTCCGCGTCGGCGTGCGAAGCTTA ATAATGTGTGGGGACTCCACGGGCTTTATGAATGTTTTACGCGCGCTGGCAAGATTGAAGAAGCCCTCTTCATCA AATCATCACGTGATATTGCCATAGCCTCAGCTGATGTCCCCGTTACTACTTCATGCTATTGCCGCAGATCTGCAG TGGAAAAGATTGAGTGCTGTGCATGA |