Protein ID | Ani_SJS100_1|g11264.t1 |
Gene name | |
Location | scaffold_178:4077..6680 |
Strand | - |
Gene length (bp) | 2603 |
Transcript length (bp) | 2286 |
Coding sequence length (bp) | 2286 |
Protein length (aa) | 762 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04516 | CP2 | CP2 transcription factor | 7.6E-86 | 192 | 438 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 25 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
CP2 |
Type of sequence | Sequence |
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Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11264.t1 MFRNRKNSQKPDDLLIQKFRKTFSDIVSPVVHRNATRFGQTPIGPITPTRREMNNDTKLSDSTPRATEDMRFPAP YTDPNAVSYVIPLQPHRSSTPNSGRLGAVYHSQAGELHFPVTGLSMITPLSLPQQVSAAPVNPETAASGLDNFDQ QYIPPHFHCPQPFARQPTFAPTAFVQSDAGYDAMDEPVEEHSLNNMDVQSSTPSHNLASSIQDEQASIANPGETL RYRITLRAPTAMINDQAEIPVTYLNKGQAYSVSVIDSTPPPMTMRSIKYRTYIRVSFQEEEQRAKPAVCWRLWKE GRGSDEAHRRGGKLQAMEYVDPIQGGIKETKNRQVQLESSAFDGFCVTWTRNPSTGASECLITVRFNFLSTDFSL SKGVKGIPVRLCAKTEMLSPDYASSTPGREAEVCYCKVKLFRDHGAERKLSCDVAHVKKTMEKLRQQIAQAEMGS GNCGKRKRSNGLVALKGADPRPAKITKYKRVRSMGSQDGPGKMRLEGDLHAKLALMQGMFTSARPVSVLGLRGEE QDDPELYPVMLPESRVFVEQENSRGSRLSIDGSSLHAVSPTSSSISVSSPFLPTNLQSNTFYCSGYHRSLTTSRG NSLPCSEVLGDKVTLKYPVKVPKFTSTVGNANMGYIEAVDIDPNYHPPAERPVISIACFYVRFPCNDRLSDDYYR AVYLTERTVRDLIEKITIKQHIDPQRVVRVLHVKQNGLEIMVDDDVRELPDGQDMVVEMSEVSSFENAAVTGPGN LSSALELKLSY* |
Coding | >Ani_SJS100_1|g11264.t1 ATGTTCCGCAACAGAAAGAATTCCCAGAAGCCAGACGACCTCCTCATCCAGAAATTTCGAAAGACCTTCTCAGAT ATTGTTTCCCCAGTCGTCCACCGCAATGCCACGCGCTTCGGTCAGACGCCCATTGGACCTATCACTCCGACTAGG CGGGAAATGAATAACGATACGAAGCTCAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTTTCCAGCTCCC TATACCGATCCGAACGCTGTCTCTTATGTAATCCCGCTACAACCACATAGGAGCTCTACGCCCAATTCAGGTAGA CTGGGTGCCGTGTACCATAGTCAAGCGGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGATTACTCCACTC TCTCTCCCGCAGCAGGTTTCTGCAGCTCCCGTCAACCCCGAAACTGCAGCCTCAGGTCTTGATAACTTCGACCAG CAATATATTCCCCCACACTTCCATTGCCCCCAGCCGTTTGCTCGGCAGCCAACCTTTGCACCCACGGCTTTCGTT CAGAGTGATGCAGGTTACGATGCCATGGACGAGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCAGAGT AGCACGCCTTCTCACAACCTTGCATCATCAATTCAAGACGAACAAGCGAGCATTGCGAACCCAGGTGAAACTCTT CGCTATCGCATCACTTTGCGCGCACCTACAGCAATGATCAATGACCAAGCCGAGATCCCAGTTACTTACCTCAAC AAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCATGACTATGCGATCGATCAAATATCGA ACCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAA GGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAATGGAGTATGTCGATCCCATACAGGGA GGCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACT CGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATAACTGTCCGGTTTAACTTCCTATCAACAGATTTCAGTCTG TCGAAGGGTGTAAAAGGTATCCCAGTCAGATTGTGTGCGAAGACAGAAATGCTATCCCCGGATTATGCGAGCTCA ACCCCGGGCAGGGAGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGACCATGGGGCTGAGCGGAAGCTC TCCTGTGATGTCGCTCATGTTAAGAAGACAATGGAAAAGCTTCGACAACAGATTGCCCAAGCTGAGATGGGCTCC GGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGGCGCTGATCCCCGCCCAGCCAAAATC ACCAAGTATAAACGGGTACGGTCCATGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCAT GCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAGCGCGGCCGGTAAGCGTCCTAGGATTGCGGGGTGAAGAG CAAGACGACCCGGAGTTGTACCCTGTCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGG TCTCGGCTCAGTATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAGCAGTAGCATCTCCGTGAGCTCGCCA TTCCTTCCTACCAATCTGCAGTCGAATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGA AATTCACTACCATGCTCTGAAGTCCTGGGCGACAAGGTCACGCTAAAGTATCCCGTCAAAGTACCGAAGTTCACT TCAACCGTCGGTAACGCCAACATGGGATACATAGAGGCAGTAGACATCGACCCAAATTATCATCCACCGGCGGAG CGACCAGTAATCTCAATCGCTTGTTTCTACGTACGATTTCCTTGTAACGATCGGCTTTCGGATGACTATTACCGG GCCGTCTATCTGACTGAGCGAACGGTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCACATCGATCCGCAG CGTGTAGTGCGAGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGGTGGATGATGATGTACGCGAGCTTCCT GACGGCCAGGACATGGTTGTCGAAATGTCCGAGGTGTCGTCATTTGAGAACGCCGCAGTTACGGGGCCAGGAAAT CTTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAA |
Transcript | >Ani_SJS100_1|g11264.t1 ATGTTCCGCAACAGAAAGAATTCCCAGAAGCCAGACGACCTCCTCATCCAGAAATTTCGAAAGACCTTCTCAGAT ATTGTTTCCCCAGTCGTCCACCGCAATGCCACGCGCTTCGGTCAGACGCCCATTGGACCTATCACTCCGACTAGG CGGGAAATGAATAACGATACGAAGCTCAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTTTCCAGCTCCC TATACCGATCCGAACGCTGTCTCTTATGTAATCCCGCTACAACCACATAGGAGCTCTACGCCCAATTCAGGTAGA CTGGGTGCCGTGTACCATAGTCAAGCGGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGATTACTCCACTC TCTCTCCCGCAGCAGGTTTCTGCAGCTCCCGTCAACCCCGAAACTGCAGCCTCAGGTCTTGATAACTTCGACCAG CAATATATTCCCCCACACTTCCATTGCCCCCAGCCGTTTGCTCGGCAGCCAACCTTTGCACCCACGGCTTTCGTT CAGAGTGATGCAGGTTACGATGCCATGGACGAGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCAGAGT AGCACGCCTTCTCACAACCTTGCATCATCAATTCAAGACGAACAAGCGAGCATTGCGAACCCAGGTGAAACTCTT CGCTATCGCATCACTTTGCGCGCACCTACAGCAATGATCAATGACCAAGCCGAGATCCCAGTTACTTACCTCAAC AAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCTACGCCGCCCCCCATGACTATGCGATCGATCAAATATCGA ACCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAGAGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAA GGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGCAAGCTCCAAGCAATGGAGTATGTCGATCCCATACAGGGA GGCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTCGAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACT CGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATAACTGTCCGGTTTAACTTCCTATCAACAGATTTCAGTCTG TCGAAGGGTGTAAAAGGTATCCCAGTCAGATTGTGTGCGAAGACAGAAATGCTATCCCCGGATTATGCGAGCTCA ACCCCGGGCAGGGAGGCAGAGGTGTGCTACTGCAAGGTCAAGCTTTTCCGCGACCATGGGGCTGAGCGGAAGCTC TCCTGTGATGTCGCTCATGTTAAGAAGACAATGGAAAAGCTTCGACAACAGATTGCCCAAGCTGAGATGGGCTCC GGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTGGTTGCACTCAAGGGCGCTGATCCCCGCCCAGCCAAAATC ACCAAGTATAAACGGGTACGGTCCATGGGCTCGCAGGACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCAT GCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCAGCGCGGCCGGTAAGCGTCCTAGGATTGCGGGGTGAAGAG CAAGACGACCCGGAGTTGTACCCTGTCATGCTGCCCGAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGG TCTCGGCTCAGTATTGATGGTTCGTCTTTGCACGCCGTTTCACCTACCAGCAGTAGCATCTCCGTGAGCTCGCCA TTCCTTCCTACCAATCTGCAGTCGAATACGTTCTATTGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGA AATTCACTACCATGCTCTGAAGTCCTGGGCGACAAGGTCACGCTAAAGTATCCCGTCAAAGTACCGAAGTTCACT TCAACCGTCGGTAACGCCAACATGGGATACATAGAGGCAGTAGACATCGACCCAAATTATCATCCACCGGCGGAG CGACCAGTAATCTCAATCGCTTGTTTCTACGTACGATTTCCTTGTAACGATCGGCTTTCGGATGACTATTACCGG GCCGTCTATCTGACTGAGCGAACGGTTCGCGATCTGATCGAGAAGATTACCATAAAACAGCACATCGATCCGCAG CGTGTAGTGCGAGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGGTGGATGATGATGTACGCGAGCTTCCT GACGGCCAGGACATGGTTGTCGAAATGTCCGAGGTGTCGTCATTTGAGAACGCCGCAGTTACGGGGCCAGGAAAT CTTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAA |
Gene | >Ani_SJS100_1|g11264.t1 ATGTTCCGCAACAGGTATGGTTGACATACCGGATGCCGACGATTCGCCGGCCATTCTCATACTGATCGGGATGTC ACCCTTGCAGAAAGAATTCCCAGAAGCCAGACGACCTCCTCATCCAGAAATTTCGAAAGACCTTCTCAGATATTG TTTCCCCAGTCGTCCACCGCAATGCCACGCGCTTCGGTCAGACGCCCATTGGACCTATCACTCCGACTAGGTAAA AATGCCTTTCAGCAAATGATAACCTGCTGCTACTTGTTGTCCGTTTCCCATTCTTATTCATCAGAGACAATAGCC TGAAAAACTACGATCTGGGCGACAGCTAACATGATATTACTGCGCCAGGCGGGAAATGAATAACGATACGAAGCT CAGTGATTCTACGCCCCGCGCAACAGAAGACATGCGGTTTCCAGCTCCCTATACCGATCCGAACGCTGTCTCTTA TGTAATCCCGCTACAACCACATAGGAGCTCTACGCCCAATTCAGGTAGACTGGGTGCCGTGTACCATAGTCAAGC GGGGGAATTGCATTTTCCTGTGACGGGTCTGAGTATGATTACTCCACTCTCTCTCCCGCAGCAGGTTTCTGCAGC TCCCGTCAACCCCGAAACTGCAGCCTCAGGTCTTGATAACTTCGACCAGCAATATATTCCCCCACACTTCCATTG CCCCCAGCCGTTTGCTCGGCAGCCAACCTTTGCACCCACGGCTTTCGTTCAGAGTGATGCAGGTTACGATGCCAT GGACGAGCCTGTTGAAGAACACTCTCTAAACAATATGGATGTGCAGAGTAGCACGCCTTCTCACAACCTTGCATC ATCAATTCAAGACGAACAAGCGAGCATTGCGAACCCAGGTGAAACGTGAGCTATTAGAGCCTATCTCATTGCGTC TGTTTAACAGTGCTTAACCGTTCTGGGCACTGCAGTCTTCGCTATCGCATCACTTTGCGCGCACCTACAGCAATG ATCAATGACCAAGCCGAGATCCCAGTTACTTACCTCAACAAAGGCCAGGCGTACTCGGTGTCCGTGATTGATTCT ACGCCGCCCCCCATGACTATGCGATCGATCAAATATCGAACCTATATCCGTGTGTCATTCCAAGAAGAAGAGCAG AGGGCAAAGCCAGCTGTTTGTTGGCGACTATGGAAAGAAGGTCGAGGTTCCGATGAAGCGCATCGACGAGGCGGC AAGCTCCAAGCAATGGAGTATGTCGATCCCATACAGGGAGGCATCAAAGAGACAAAGAACCGGCAGGTCCAGCTC GAGAGCTCAGCATTCGATGGATTCTGCGTCACATGGACTCGTAACCCGTCAACTGGGGCCTCAGAATGTTTGATA ACTGTCCGGTTTAACTTCCTATCAACAGATTTCAGTCTGTCGAAGGGTGTAAAAGGTATCCCAGTCAGATTGTGT GCGAAGACAGAAATGCTATCCCCGGATTATGCGAGCTCAACCCCGGGCAGGGAGGCAGAGGTGTGCTACTGCAAG GTCAAGCTTTTCCGCGACCATGGGGCTGAGCGGAAGCTCTCCTGTGATGTCGCTCATGTTAAGAAGACAATGGAA AAGCTTCGACAACAGATTGCCCAAGCTGAGATGGGCTCCGGTAACTGCGGCAAGCGTAAGCGTAGCAATGGCTTG GTTGCACTCAAGGGCGCTGATCCCCGCCCAGCCAAAATCACCAAGTATAAACGGGTACGGTCCATGGGCTCGCAG GACGGCCCTGGCAAAATGCGTTTGGAAGGCGATCTCCATGCGAAGCTTGCCTTAATGCAAGGTATGTTCACATCA GCGCGGCCGGTAAGCGTCCTAGGATTGCGGGGTGAAGAGCAAGACGACCCGGAGTTGTACCCTGTCATGCTGCCC GAGTCGCGTGTTTTCGTCGAACAAGAGAACAGTCGCGGGTCTCGGCTCAGTATTGATGGTTCGTCTTTGCACGCC GTTTCACCTACCAGCAGTAGCATCTCCGTGAGCTCGCCATTCCTTCCTACCAATCTGCAGTCGAATACGTTCTAT TGCTCAGGGTACCATCGATCATTGACCACCTCCCGAGGAAATTCACTACCATGCTCTGAAGTCCTGGGCGACAAG GTCACGCTAAAGTATCCCGTCAAAGTACCGAAGTTCACTTCAACCGTCGGTAACGCCAACATGGGATACATAGAG GCAGTAGACATCGACCCAAATTATCATCCACCGGCGGAGCGACCAGTAATCTCAAGTTAAGTTACTGATTCGGTA ACACCAAAGACAGGCGAACTGACATCATCCTAGTCGCTTGTTTCTACGTACGATTTCCTTGTAACGATCGGCTTT CGGATGACTATTACCGGGCCGTCTATCTGACTGAGCGAACGGTTCGCGATCTGATCGAGAAGATTACCATAAAAC AGCACATCGATCCGCAGCGTGTAGTGCGAGTCCTCCATGTCAAGCAAAATGGCCTCGAAATAATGGTGGATGATG ATGTACGCGAGCTTCCTGACGGCCAGGACATGGTTGTCGAAATGTCCGAGGTGTCGTCATTTGAGAACGCCGCAG TTACGGGGCCAGGAAATCTTAGTTCAGCCCTCGAGCTCAAATTAAGCTACTAA |