© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11249.t1 |
| Gene name | |
| Location | scaffold_175:11930..12731 |
| Strand | - |
| Gene length (bp) | 801 |
| Transcript length (bp) | 741 |
| Coding sequence length (bp) | 741 |
| Protein length (aa) | 247 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.7E-11 | 62 | 227 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 3.8E-07 | 89 | 228 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 9 | 31 | 22 |
| 2 | 58 | 80 | 22 |
| 3 | 124 | 143 | 19 |
| 4 | 148 | 170 | 22 |
| 5 | 183 | 205 | 22 |
| 6 | 210 | 232 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11249.t1 MINRLIPKVGFGWAMRIVAFMMLFFLIVAALTVRERVPPRPEVLNREILLRPFCDVKMVLLLVSGILLSFGVWCP SNYIVTSSLAVGVQTNLSQYLVSIQNAGSLFGRFFCGVFADKFGTYNSYISLNVCSGILVLALWIPATSNSAIIV FDVLFGFTSGAYYTLLVALVAPVAPPREIGYWAGLNFFFASIAGLVTGPIGGAILAQDDGSYWGMKVYSGVLLLA GSVVVLGTRLRLTGMVLWAKC* |
| Coding | >Ani_SJS100_1|g11249.t1 ATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGCCATGCGAATTGTCGCATTCATGATGTTGTTCTTT CTCATTGTCGCTGCTCTCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAGATCCTCTTG CGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAGCGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCA AGTAATTATATTGTCACATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTGTCCATACAG AATGCAGGAAGTCTTTTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATAAGTTCGGCACATACAACAGTTATATC TCTCTCAATGTCTGCTCCGGTATCCTGGTGTTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGTC TTTGATGTACTGTTTGGATTCACGTCGGGCGCCTACTACACTCTTCTCGTGGCATTGGTGGCACCCGTAGCCCCG CCTCGAGAGATTGGATATTGGGCTGGACTGAACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCATT GGAGGCGCAATATTAGCCCAAGATGACGGATCTTACTGGGGAATGAAGGTCTACTCCGGCGTTCTCCTGCTTGCG GGAAGTGTAGTTGTGCTGGGGACGCGACTGCGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGA |
| Transcript | >Ani_SJS100_1|g11249.t1 ATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGCCATGCGAATTGTCGCATTCATGATGTTGTTCTTT CTCATTGTCGCTGCTCTCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAGATCCTCTTG CGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAGCGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCA AGTAATTATATTGTCACATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTGTCCATACAG AATGCAGGAAGTCTTTTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATAAGTTCGGCACATACAACAGTTATATC TCTCTCAATGTCTGCTCCGGTATCCTGGTGTTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGTC TTTGATGTACTGTTTGGATTCACGTCGGGCGCCTACTACACTCTTCTCGTGGCATTGGTGGCACCCGTAGCCCCG CCTCGAGAGATTGGATATTGGGCTGGACTGAACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCATT GGAGGCGCAATATTAGCCCAAGATGACGGATCTTACTGGGGAATGAAGGTCTACTCCGGCGTTCTCCTGCTTGCG GGAAGTGTAGTTGTGCTGGGGACGCGACTGCGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGA |
| Gene | >Ani_SJS100_1|g11249.t1 ATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGCCATGCGAATTGTCGCATTCATGATGTTGTTCTTT CTCATTGTCGCTGCTCTCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAGATCCTCTTG CGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAGCGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCA AGTAATTATATTGTCACATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTGTCCATACAG AATGCAGGAAGGTGAGTCTCTGCCCCCACTCTTTAATAGTACCAGGAACAATATATTGATGTACGCTGTAGTCTT TTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATAAGTTCGGCACATACAACAGTTATATCTCTCTCAATGTCTGC TCCGGTATCCTGGTGTTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGTCTTTGATGTACTGTTT GGATTCACGTCGGGCGCCTACTACACTCTTCTCGTGGCATTGGTGGCACCCGTAGCCCCGCCTCGAGAGATTGGA TATTGGGCTGGACTGAACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCATTGGAGGCGCAATATTA GCCCAAGATGACGGATCTTACTGGGGAATGAAGGTCTACTCCGGCGTTCTCCTGCTTGCGGGAAGTGTAGTTGTG CTGGGGACGCGACTGCGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGA |