Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g11223.t1
Gene name
Location	scaffold_170:16413..17069
Strand	-
Gene length (bp)	656
Transcript length (bp)	540
Coding sequence length (bp)	540
Protein length (aa)	180

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	5	27	22
2	31	53	22
3	70	92	22
4	112	131	19
5	144	166	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g11223.t1 MKKGVLLHKLIVAELALVLGHGTFIFFHAPAQGWYLSVTAVGLTISHSLHNVIARMKIRGFFTPWGTRLYLITLL AAQPYWVVEIYANFAFFNRNQALYTTTRPLEPLFRDPWWIFTTCFLLYTIQRGYGCSLVQLICISPRFGVMLLFM VISVVFAVVDMCAIRVENRLGYPPGMEPF*
Coding	>Ani_SJS100_1\|g11223.t1 ATGAAAAAGGGGGTGCTCCTGCACAAACTCATCGTGGCAGAGCTCGCCCTGGTCCTCGGGCACGGAACGTTCATC TTTTTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGTTACGGCCGTCGGTCTCACAATCTCGCATTCCCTCCAC AACGTGATTGCACGGATGAAGATTCGCGGCTTCTTCACCCCTTGGGGCACACGACTGTATCTGATCACCCTGCTG GCGGCCCAGCCGTACTGGGTCGTCGAAATTTATGCCAACTTTGCCTTTTTCAATCGGAACCAGGCCTTATATACC ACCACTCGGCCACTCGAGCCGCTCTTCCGGGACCCTTGGTGGATCTTTACCACCTGCTTTCTCCTGTACACCATC CAGCGGGGCTATGGGTGTTCGCTGGTGCAGCTGATCTGCATCAGCCCGCGGTTCGGCGTCATGCTCCTGTTCATG GTGATCTCCGTCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGG ATGGAGCCGTTCTGA
Transcript	>Ani_SJS100_1\|g11223.t1 ATGAAAAAGGGGGTGCTCCTGCACAAACTCATCGTGGCAGAGCTCGCCCTGGTCCTCGGGCACGGAACGTTCATC TTTTTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGTTACGGCCGTCGGTCTCACAATCTCGCATTCCCTCCAC AACGTGATTGCACGGATGAAGATTCGCGGCTTCTTCACCCCTTGGGGCACACGACTGTATCTGATCACCCTGCTG GCGGCCCAGCCGTACTGGGTCGTCGAAATTTATGCCAACTTTGCCTTTTTCAATCGGAACCAGGCCTTATATACC ACCACTCGGCCACTCGAGCCGCTCTTCCGGGACCCTTGGTGGATCTTTACCACCTGCTTTCTCCTGTACACCATC CAGCGGGGCTATGGGTGTTCGCTGGTGCAGCTGATCTGCATCAGCCCGCGGTTCGGCGTCATGCTCCTGTTCATG GTGATCTCCGTCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGG ATGGAGCCGTTCTGA
Gene	>Ani_SJS100_1\|g11223.t1 ATGAAAAAGGGGGTGCTCCTGCACAAACTCATCGTGGCAGAGGTAAGTTGGCTGCCTCGTTGCGGCGAATGGGGC ACTATCCCGTGCTGATGCGGACGCTTAGCTCGCCCTGGTCCTCGGGCACGGAACGTTCATCTTTTTCCATGCGCC TGCCCAGGGCTGGTATCTTTCGGTTACGGCCGTCGGTCTCACAATCTCGCATTCCCTCCACAACGTGATTGCACG GATGAAGATTCGCGGCTTCTTCACCCCTTGGGGCACACGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTA CTGGGTCGTCGAAATTTATGCCAACTTTGCCTTTTTCAATCGGAACCAGGCCTTATATACCACCACTCGGCCACT CGAGCCGCTCTTCCGGTGCGGTGTCCGAGTGCGATCCTCCCCACGCTCCGCATTGCTGATGCGAATCTAGGGACC CTTGGTGGATCTTTACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGCTATGGGTGTTCGCTGGTGCAGCTGA TCTGCATCAGCCCGCGGTTCGGCGTCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGACATGT GTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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