© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1120.t1 |
| Gene name | |
| Location | scaffold_004:41668..43589 |
| Strand | - |
| Gene length (bp) | 1921 |
| Transcript length (bp) | 1509 |
| Coding sequence length (bp) | 1509 |
| Protein length (aa) | 503 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 8.5E-55 | 36 | 479 |
| PF00324 | AA_permease | Amino acid permease | 1.2E-26 | 54 | 486 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 53 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 116 | 138 | 22 |
| 3 | 159 | 176 | 17 |
| 4 | 186 | 208 | 22 |
| 5 | 229 | 251 | 22 |
| 6 | 266 | 288 | 22 |
| 7 | 317 | 339 | 22 |
| 8 | 373 | 390 | 17 |
| 9 | 397 | 419 | 22 |
| 10 | 439 | 461 | 22 |
| 11 | 468 | 490 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1120.t1 MKAPADTMTAKSADEGENELRIGEAIPIKKPFSRLTIFSLTVVLMSTWEALSSTMSSGLVSGGPVSLIYGFILAI VGSMATAASLGEMVSMYPTAGGQYHFIAKFAPDKWQNILSWFVGWIGTFGWVSFTASAPYLAAGMIQGLVVLTCE AYQPQRWHLSLIYWALVGFATALNIWGSRLFSLVETASLVIHLVGFVVVLIVMWVCVPAKHNATFVFTTFLNSTG WSSNGLAWCLGMLSSCYVLAGYDGAIHLCEEMVNPETAVPYCMLGSLTINDILGFVFLLTILFCMGDMENALDTP TNYPIIEIFRSVTGSSAGSCALTAVLIIAAWLGTIALLASTARMVLSLARDRALPFSGYLSQLDTHTDLPKRAII TTSSLLVLFGLINIASTTAFNAILSLAVLGLHISYLVPILFFLWRRLSAPHSLSYGPWRLGRAGVAINVIAIIYL LFTSIFMVFPSYQPVTPSNVNYASLIFGFVWLMSVVFWIVRGRKEYDGPAVL* |
| Coding | >Ani_SJS100_1|g1120.t1 ATGAAGGCCCCCGCAGATACTATGACTGCCAAGTCGGCAGACGAGGGCGAGAACGAGCTCAGAATTGGAGAGGCT ATCCCAATCAAGAAGCCCTTTTCTCGACTTACAATCTTTTCCCTCACTGTGGTTCTCATGTCAACTTGGGAGGCG CTTTCCAGTACAATGTCCTCAGGTCTCGTTAGCGGTGGCCCTGTATCTCTCATCTATGGATTTATACTGGCAATC GTGGGCTCCATGGCAACAGCGGCCTCCTTGGGGGAGATGGTGTCCATGTACCCGACAGCTGGAGGTCAGTATCAC TTTATCGCGAAGTTCGCACCCGACAAATGGCAGAATATTCTGAGCTGGTTTGTAGGGTGGATAGGAACCTTTGGG TGGGTATCGTTCACTGCAAGCGCTCCATATCTTGCTGCAGGCATGATACAAGGCCTTGTAGTTCTCACATGCGAG GCGTATCAGCCTCAGCGCTGGCATCTATCATTAATATACTGGGCTCTTGTTGGTTTCGCCACAGCTCTCAACATC TGGGGCAGTCGTTTGTTCTCACTCGTAGAGACGGCGTCTCTCGTCATTCACCTGGTCGGATTTGTCGTTGTCCTG ATAGTTATGTGGGTTTGCGTCCCAGCAAAACACAACGCCACATTTGTCTTTACTACCTTCCTGAATAGCACCGGA TGGTCGAGTAATGGCCTTGCCTGGTGCCTAGGAATGCTCTCCAGCTGCTATGTACTGGCAGGCTACGACGGAGCC ATTCATCTTTGCGAAGAGATGGTTAATCCAGAAACCGCCGTCCCATACTGTATGCTGGGCTCGCTTACCATCAAC GACATATTAGGTTTCGTTTTTCTACTCACCATTCTGTTCTGCATGGGAGACATGGAAAACGCACTTGATACCCCG ACCAACTATCCAATAATCGAAATTTTTCGCAGTGTAACGGGATCATCGGCTGGAAGCTGTGCCCTGACGGCTGTT TTGATAATCGCAGCCTGGCTGGGCACCATTGCGCTGCTGGCATCAACCGCTCGTATGGTTCTGTCCTTAGCTCGG GATAGAGCTCTCCCATTTTCCGGTTATCTCTCTCAGCTTGATACTCACACAGACTTACCGAAGCGCGCAATCATC ACAACGAGCAGTCTGCTCGTGCTGTTCGGGCTGATCAACATCGCTTCCACTACTGCTTTCAACGCCATCCTCTCA CTTGCCGTCTTAGGATTACACATCTCATACCTTGTCCCTATCCTATTTTTCCTATGGCGCCGCCTTTCCGCCCCA CACAGTTTAAGCTATGGGCCATGGAGGCTTGGCCGCGCTGGCGTTGCCATCAATGTTATCGCCATCATCTATCTG CTATTCACCAGCATCTTCATGGTGTTTCCCTCCTATCAACCCGTCACTCCATCTAACGTGAACTACGCTTCTTTG ATCTTTGGGTTTGTTTGGCTGATGAGCGTGGTCTTCTGGATTGTGCGGGGTCGAAAGGAATATGATGGTCCTGCT GTTTTGTGA |
| Transcript | >Ani_SJS100_1|g1120.t1 ATGAAGGCCCCCGCAGATACTATGACTGCCAAGTCGGCAGACGAGGGCGAGAACGAGCTCAGAATTGGAGAGGCT ATCCCAATCAAGAAGCCCTTTTCTCGACTTACAATCTTTTCCCTCACTGTGGTTCTCATGTCAACTTGGGAGGCG CTTTCCAGTACAATGTCCTCAGGTCTCGTTAGCGGTGGCCCTGTATCTCTCATCTATGGATTTATACTGGCAATC GTGGGCTCCATGGCAACAGCGGCCTCCTTGGGGGAGATGGTGTCCATGTACCCGACAGCTGGAGGTCAGTATCAC TTTATCGCGAAGTTCGCACCCGACAAATGGCAGAATATTCTGAGCTGGTTTGTAGGGTGGATAGGAACCTTTGGG TGGGTATCGTTCACTGCAAGCGCTCCATATCTTGCTGCAGGCATGATACAAGGCCTTGTAGTTCTCACATGCGAG GCGTATCAGCCTCAGCGCTGGCATCTATCATTAATATACTGGGCTCTTGTTGGTTTCGCCACAGCTCTCAACATC TGGGGCAGTCGTTTGTTCTCACTCGTAGAGACGGCGTCTCTCGTCATTCACCTGGTCGGATTTGTCGTTGTCCTG ATAGTTATGTGGGTTTGCGTCCCAGCAAAACACAACGCCACATTTGTCTTTACTACCTTCCTGAATAGCACCGGA TGGTCGAGTAATGGCCTTGCCTGGTGCCTAGGAATGCTCTCCAGCTGCTATGTACTGGCAGGCTACGACGGAGCC ATTCATCTTTGCGAAGAGATGGTTAATCCAGAAACCGCCGTCCCATACTGTATGCTGGGCTCGCTTACCATCAAC GACATATTAGGTTTCGTTTTTCTACTCACCATTCTGTTCTGCATGGGAGACATGGAAAACGCACTTGATACCCCG ACCAACTATCCAATAATCGAAATTTTTCGCAGTGTAACGGGATCATCGGCTGGAAGCTGTGCCCTGACGGCTGTT TTGATAATCGCAGCCTGGCTGGGCACCATTGCGCTGCTGGCATCAACCGCTCGTATGGTTCTGTCCTTAGCTCGG GATAGAGCTCTCCCATTTTCCGGTTATCTCTCTCAGCTTGATACTCACACAGACTTACCGAAGCGCGCAATCATC ACAACGAGCAGTCTGCTCGTGCTGTTCGGGCTGATCAACATCGCTTCCACTACTGCTTTCAACGCCATCCTCTCA CTTGCCGTCTTAGGATTACACATCTCATACCTTGTCCCTATCCTATTTTTCCTATGGCGCCGCCTTTCCGCCCCA CACAGTTTAAGCTATGGGCCATGGAGGCTTGGCCGCGCTGGCGTTGCCATCAATGTTATCGCCATCATCTATCTG CTATTCACCAGCATCTTCATGGTGTTTCCCTCCTATCAACCCGTCACTCCATCTAACGTGAACTACGCTTCTTTG ATCTTTGGGTTTGTTTGGCTGATGAGCGTGGTCTTCTGGATTGTGCGGGGTCGAAAGGAATATGATGGTCCTGCT GTTTTGTGA |
| Gene | >Ani_SJS100_1|g1120.t1 ATGAAGGCCCCCGCAGATACTATGACTGCCAAGTCGGCAGACGAGGGCGAGAACGAGCTCAGAATTGGAGAGGCT ATCCCAATCAAGGTCAGTATTCTTTTTGAGTAGTCCACAAGCCTGGCATTGAAATGGACAACCTCTGATGACGAT GCTTGATCTATAGAAGCCCTTTTCTCGACTTACAATCTTTTCCCTCACTGTGGTTCTCATGTCAACTTGGGAGGC GCTTTCCAGGTACAGTCCCACGTTCACTATCCAACACCATAATCTAGTGTCTGATCACACCATCCATGATAGTAC AATGTCCTCAGGTCTCGTTAGCGGTGGCCCTGTATCTCTCATCTATGGATTTATACGTGTGTTCTGCCTCTTCGA CTATTCACAACTAGTCTGACCCCGATCAAAGTGGCAATCGTGGGCTCCATGGCAACAGCGGCCTCCTTGGGGGAG ATGGTGTCCATGTCAGTACCTTGTGTTTTCGCACTTACTACCGTTACCTGACCTTGCTGAGTGGTAGGTACCCGA CAGCTGGAGGTCAGTATCACTTTATCGCGAAGTTCGCACCCGACAAATGGCAGAATATTCTGAGCTGGTTTGTAG GGTGGATAGGTAGGATGTACTATGATAAGGCTTATATTCCACCGTGCTCATCTTTTTCTACATTCATAGGAACCT TTGGGTGGGTATCGTTCACTGCAAGCGCTCCATATCTTGCTGCAGGCATGATACAAGGCCTTGTAGTTCTCACAT GCGAGGCGTATCAGCCTCAGCGCTGGCATCTATCATTAATATACTGGGCTCTTGTTGGTTTCGCCACAGCTCTCA ACATCTGGGGCAGTCGTTTGTTCTCACTCGTAGAGACGGCGTCTCTCGTCATTCACCTGGTCGGATTTGTCGTTG TCCTGATAGTTATGTGGGTTTGCGTCCCAGCAAAACACAACGCCACATTTGTCTTTACTACCTTCCTGAATAGCA CCGGATGGTCGAGTAATGGCCTTGCCTGGTGCCTAGGAATGCTCTCCAGCTGCTATGTACTGGCAGGTTCGTGAG AATCCACCCTGGCATCGAAAATCTACATCCTGACCCACTGAGCTTAGGCTACGACGGAGCCATTCATCTTTGCGA AGAGATGGTTAATCCAGAAACCGCCGTCCCATACTGTATGCTGGGCTCGCTTACCATCAACGACATATTAGGTTT CGTTTTTCTACTCACCATTCTGTTCTGCATGGGAGACATGGAAAACGCACTTGATACCCCGACCAACTATCCAAT AATCGAAATTTTTCGCAGTGTAACGGGATCATCGGCTGGAAGCTGTGCCCTGACGGCTGTTTTGATAATCGCAGC CTGGCTGGGCACCATTGCGCTGCTGGCATCAACCGCTCGTATGGTTCTGTCCTTAGCTCGGGATAGAGGTACGAG CGGCCACCTCATCCCTCCCATTTCTCTTTCACTGACCCACCTAGCTCTCCCATTTTCCGGTTATCTCTCTCAGCT TGATACTCACACAGACTTACCGAAGCGCGCAATCATCACAACGAGCAGTCTGCTCGTGCTGTTCGGGCTGATCAA CATCGCTTCCACTACTGCTTTCAACGCCATCCTCTCACTTGCCGTCTTAGGATTACACATCTCATACCTTGTCCC TATCCTATTTTTCCTATGGCGCCGCCTTTCCGCCCCACACAGTTTAAGCTATGGGCCATGGAGGCTTGGCCGCGC TGGCGTTGCCATCAATGTTATCGCCATCATCTATCTGCTATTCACCAGCATCTTCATGGTGTTTCCCTCCTATCA ACCCGTCACTCCATCTAACGTGAACTACGCTTCTTTGATCTTTGGGTTTGTTTGGCTGATGAGCGTGGTCTTCTG GATTGTGCGGGGTCGAAAGGAATATGATGGTCCTGCTGTTTTGTGA |