© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11188.t1 |
| Gene name | |
| Location | scaffold_165:8018..9262 |
| Strand | + |
| Gene length (bp) | 1244 |
| Transcript length (bp) | 1167 |
| Coding sequence length (bp) | 1167 |
| Protein length (aa) | 389 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.7E-24 | 35 | 374 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 42 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 19 | 41 | 22 |
| 2 | 68 | 85 | 17 |
| 3 | 92 | 114 | 22 |
| 4 | 124 | 146 | 22 |
| 5 | 153 | 175 | 22 |
| 6 | 185 | 207 | 22 |
| 7 | 220 | 239 | 19 |
| 8 | 249 | 271 | 22 |
| 9 | 291 | 313 | 22 |
| 10 | 323 | 345 | 22 |
| 11 | 352 | 374 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11188.t1 MDDMYSEAELERLGRMRPAIFPNLASELGFCFSLVLSQIMAEYLISGFNVLLPSLAEGLDIPESSSSWPSSAFAL TAGGSLLFFGHLADRFGGFVVFEGGLAWRLVWSLVAGFAKNALMMCFCRALQGFGPAALLSAGIMLLGTTYRPGW RKNLVFCMYGACAPIGFVAGVFVSSMTGQFLDWRWYFWIGTMLLFLALIAAVLTVPASIRRKPPHPDMPIGWAGA GLFFCSLVLIFFAMNDCGHAPDSWRTPYVYVTLVVGIFVLLAALYVEGCVAKEPLPPINLFRIPQLSSLLLGLFC FYGVFGIWLLYAVEYMENIMHVSPLLVVAYFAPFALGGIFFSLLGDLFLHVLPGTVLLVILGIGWLMAPLLFAIM PRGPATGPTCFQP* |
| Coding | >Ani_SJS100_1|g11188.t1 ATGGACGACATGTACTCGGAAGCTGAGTTGGAGCGACTTGGTCGCATGAGGCCAGCCATTTTTCCCAATTTGGCA TCAGAATTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAAATTATGGCAGAATACCTCATCTCCGGCTTCAATGTT CTCCTACCCTCTTTGGCGGAGGGTCTCGACATCCCCGAATCCTCATCCAGCTGGCCATCGAGTGCCTTTGCCCTG ACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCATCTGGCGGATCGCTTTGGAGGATTTGTGGTGTTCGAAGGGGGG TTGGCCTGGCGTCTCGTCTGGTCGCTCGTTGCCGGTTTCGCGAAGAACGCCCTCATGATGTGTTTCTGTCGGGCA TTGCAAGGCTTCGGCCCGGCCGCTTTGCTTTCGGCGGGAATCATGCTCTTGGGCACTACCTATCGCCCGGGATGG CGCAAAAACTTGGTTTTCTGTATGTACGGTGCCTGCGCCCCCATCGGCTTTGTCGCGGGGGTTTTCGTCTCCAGC ATGACCGGTCAGTTTCTCGATTGGCGCTGGTACTTTTGGATAGGAACGATGCTGCTCTTCCTTGCCCTGATCGCA GCTGTCCTCACCGTCCCAGCCAGTATCCGCCGCAAGCCTCCGCACCCTGACATGCCTATAGGTTGGGCTGGGGCC GGCCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTTGCCATGAACGACTGCGGTCATGCACCCGACAGCTGGCGC ACACCCTACGTGTATGTCACGTTGGTTGTGGGTATTTTTGTGCTGCTGGCCGCACTGTACGTCGAAGGCTGTGTA GCCAAGGAGCCGCTGCCTCCAATTAATCTCTTCCGGATCCCCCAGTTATCGTCCTTACTTCTCGGACTGTTCTGT TTCTACGGCGTGTTTGGCATTTGGCTACTTTATGCTGTGGAGTACATGGAGAACATTATGCACGTCTCGCCCCTG CTCGTGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGCATCTTCTTTAGCCTGCTTGGGGATTTGTTTCTGCAT GTTCTCCCGGGCACAGTGCTTCTTGTAATCTTGGGCATTGGATGGCTGATGGCACCGCTGCTTTTCGCCATCATG CCGCGCGGGCCGGCTACTGGCCCTACGTGTTTCCAGCCATGA |
| Transcript | >Ani_SJS100_1|g11188.t1 ATGGACGACATGTACTCGGAAGCTGAGTTGGAGCGACTTGGTCGCATGAGGCCAGCCATTTTTCCCAATTTGGCA TCAGAATTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAAATTATGGCAGAATACCTCATCTCCGGCTTCAATGTT CTCCTACCCTCTTTGGCGGAGGGTCTCGACATCCCCGAATCCTCATCCAGCTGGCCATCGAGTGCCTTTGCCCTG ACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCATCTGGCGGATCGCTTTGGAGGATTTGTGGTGTTCGAAGGGGGG TTGGCCTGGCGTCTCGTCTGGTCGCTCGTTGCCGGTTTCGCGAAGAACGCCCTCATGATGTGTTTCTGTCGGGCA TTGCAAGGCTTCGGCCCGGCCGCTTTGCTTTCGGCGGGAATCATGCTCTTGGGCACTACCTATCGCCCGGGATGG CGCAAAAACTTGGTTTTCTGTATGTACGGTGCCTGCGCCCCCATCGGCTTTGTCGCGGGGGTTTTCGTCTCCAGC ATGACCGGTCAGTTTCTCGATTGGCGCTGGTACTTTTGGATAGGAACGATGCTGCTCTTCCTTGCCCTGATCGCA GCTGTCCTCACCGTCCCAGCCAGTATCCGCCGCAAGCCTCCGCACCCTGACATGCCTATAGGTTGGGCTGGGGCC GGCCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTTGCCATGAACGACTGCGGTCATGCACCCGACAGCTGGCGC ACACCCTACGTGTATGTCACGTTGGTTGTGGGTATTTTTGTGCTGCTGGCCGCACTGTACGTCGAAGGCTGTGTA GCCAAGGAGCCGCTGCCTCCAATTAATCTCTTCCGGATCCCCCAGTTATCGTCCTTACTTCTCGGACTGTTCTGT TTCTACGGCGTGTTTGGCATTTGGCTACTTTATGCTGTGGAGTACATGGAGAACATTATGCACGTCTCGCCCCTG CTCGTGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGCATCTTCTTTAGCCTGCTTGGGGATTTGTTTCTGCAT GTTCTCCCGGGCACAGTGCTTCTTGTAATCTTGGGCATTGGATGGCTGATGGCACCGCTGCTTTTCGCCATCATG CCGCGCGGGCCGGCTACTGGCCCTACGTGTTTCCAGCCATGA |
| Gene | >Ani_SJS100_1|g11188.t1 ATGGACGACATGTACTCGGAAGCTGAGTTGGAGCGACTTGGTCGCATGAGGCCAGCCATTTTTCCCAATTTGGCA TCAGAATTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAAATTATGGCAGTAAGTTTCCTTCGCCATATCTCTTGT TTACGTTTGTGAACACCCGTTTTGGGGACCTTTCGGCTAACCTTCTACAGGAATACCTCATCTCCGGCTTCAATG TTCTCCTACCCTCTTTGGCGGAGGGTCTCGACATCCCCGAATCCTCATCCAGCTGGCCATCGAGTGCCTTTGCCC TGACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCATCTGGCGGATCGCTTTGGAGGATTTGTGGTGTTCGAAGGGG GGTTGGCCTGGCGTCTCGTCTGGTCGCTCGTTGCCGGTTTCGCGAAGAACGCCCTCATGATGTGTTTCTGTCGGG CATTGCAAGGCTTCGGCCCGGCCGCTTTGCTTTCGGCGGGAATCATGCTCTTGGGCACTACCTATCGCCCGGGAT GGCGCAAAAACTTGGTTTTCTGTATGTACGGTGCCTGCGCCCCCATCGGCTTTGTCGCGGGGGTTTTCGTCTCCA GCATGACCGGTCAGTTTCTCGATTGGCGCTGGTACTTTTGGATAGGAACGATGCTGCTCTTCCTTGCCCTGATCG CAGCTGTCCTCACCGTCCCAGCCAGTATCCGCCGCAAGCCTCCGCACCCTGACATGCCTATAGGTTGGGCTGGGG CCGGCCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTTGCCATGAACGACTGCGGTCATGCACCCGACAGCTGGC GCACACCCTACGTGTATGTCACGTTGGTTGTGGGTATTTTTGTGCTGCTGGCCGCACTGTACGTCGAAGGCTGTG TAGCCAAGGAGCCGCTGCCTCCAATTAATCTCTTCCGGATCCCCCAGTTATCGTCCTTACTTCTCGGACTGTTCT GTTTCTACGGCGTGTTTGGCATTTGGCTACTTTATGCTGTGGAGTACATGGAGAACATTATGCACGTCTCGCCCC TGCTCGTGGTGGCGTACTTTGCCCCCTTCGCATTAGGTGGCATCTTCTTTAGCCTGCTTGGGGATTTGTTTCTGC ATGTTCTCCCGGGCACAGTGCTTCTTGTAATCTTGGGCATTGGATGGCTGATGGCACCGCTGCTTTTCGCCATCA TGCCGCGCGGGCCGGCTACTGGCCCTACGTGTTTCCAGCCATGA |