Protein ID | Ani_SJS100_1|g11170.t1 |
Gene name | |
Location | scaffold_162:13808..16757 |
Strand | + |
Gene length (bp) | 2949 |
Transcript length (bp) | 2949 |
Coding sequence length (bp) | 2949 |
Protein length (aa) | 983 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01388 | ARID | ARID/BRIGHT DNA binding domain | 4.5E-21 | 291 | 376 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003677 | DNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.45 |
Transcription Factor Class (based on PFAM domains) |
---|
ARID/BRIGHT |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11170.t1 MNAWLADASNLPNHDNGAFHQATIDPSAAFLHTSPTPDPTQFQRMFNGVPRNASPGFHNPNQVIPSKRPRPEDAM SMSPRQAPGAIAASRSQTPHQVPFSGYQGAANGAPQYPPHPTPYQHLQQGASPNVTQSPIMQEFDQHGVQRMGTA SPSPFSPAGPQVGSHMSPSQSDHPSRVNTPQNSSFMPNQPFPQPMAPQFPPAPAMTTAAVQAPMQAHYGGMPQGY QQAIAAQQQQQRMHAMQMQNQGRPMAMNPAMAGRPVAAGMNAMANPQQMAAIRQMQQTMAKPPNPEGFMRSLQKF MMSRNLPLDPSPVVCGRPINLVQLYATVMKLGGSKKITAANMWHVIAQQLQFPPMQLPMAMQELREHYQRNLAAY EQAFLSTQQKQFADQMQQTAVPRQPSDPSAMQFQSPAIKPGQGFENAQQMGHPSPSPASVSSSVQHNASNGFATP TPVKTQGKPQNQHRLSISRQSQPPATPNDPTGQMPSQSPAQPGKGPGQVPGKPSEQLDQSDQPLKHQIEDPYKPM VLPESNFHGPIAIDEMYQIGEDITRLKPNVPSFAELGVIDIHALTMSIKSGIHAEMRMALDTLTSISSEPAIQIS LDNCDDLVESLIECAEDQAEFLAEHAAEVSDMMLLSSYEEVTRGCQSEWTSLADVPEFGSLDYELDRAVDRLICI TTILRNFSFIESNFGMLSTPPVVQFMSTIIRYLGTRNMLLRTHQNTLDFMKDTVTYLSNVAHTIQLPSKEEALCL LHFLLAFAPFPGPMGSEGIMFNSYNPSVHKYTPAAVDSLAKLLARDEPNRTFFRAIFSGDGVSIQQELLTRAFGL AICPVPDQPRKPLAIADARKVFLMQGLLAADILSGFADGPIAKSWLESIDGFAIHLLRLSCLLSTERVPPPNTNS RQSHAARGQAEAEAAAYSSIINRGLAILRRLAEKSKLADSNATLRFPSGIIPRKESLLGALLMPSIDPGVVRQLI TYARLAE* |
Coding | >Ani_SJS100_1|g11170.t1 ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGGTGCTTTTCACCAAGCGACCATTGAT CCTTCTGCGGCATTCCTCCATACCTCTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAAAAGGCCGCGACCAGAGGATGCCATG TCGATGTCGCCTCGACAGGCTCCCGGGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGACTCCGTATCAGCACCTCCAGCAAGGA GCCTCTCCGAACGTCACCCAATCTCCGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTCTCCGTCACAGTCGGATCATCCGAGT AGGGTGAACACGCCGCAAAATAGCTCATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACATTACGGTGGCATGCCTCAGGGGTAT CAGCAGGCCATAGCTGCCCAGCAGCAACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGCGATGGCCAATCCTCAACAAATGGCC GCCATCAGGCAGATGCAACAGACCATGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCGCCCGATCAACCTGGTCCAGCTTTAT GCTACGGTCATGAAGCTCGGAGGATCGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCATTATCAGCGGAACCTAGCTGCGTAC GAGCAGGCCTTCCTCAGCACCCAGCAGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCAGGGTTTCGAAAATGCACAGCAGATG GGACACCCATCGCCAAGCCCCGCGTCTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTATTTCCCGCCAGTCACAGCCTCCAGCA ACGCCCAATGATCCTACTGGCCAAATGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCAGATTGAGGATCCCTATAAACCCATG GTCTTGCCAGAAAGCAATTTCCATGGACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCACGCTCTCACAATGAGCATCAAATCC GGGATACATGCTGAAATGCGCATGGCCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGACCAAGCAGAGTTTCTTGCGGAACAT GCCGCAGAAGTGTCTGATATGATGCTTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCGTGCCGTCGACCGACTCATCTGCATT ACAACCATACTACGCAATTTCTCGTTTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGACACATCAGAACACATTGGATTTCATG AAGGACACAGTAACATACCTCAGCAACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGAGGGTATTATGTTCAATTCATACAAC CCCTCAGTTCACAAGTACACACCGGCAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGAGTTGCTGACTCGTGCCTTTGGTCTT GCCATTTGCCCGGTCCCTGATCAGCCGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGCCAAGTCATGGCTGGAGTCGATCGAC GGGTTTGCCATCCATCTCCTGCGACTCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTACAGCTCCATAATCAATCGGGGTTTG GCGATTCTGCGTCGATTGGCCGAGAAGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGACCCTGGTGTTGTACGGCAATTGATA ACTTATGCACGACTAGCGGAATGA |
Transcript | >Ani_SJS100_1|g11170.t1 ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGGTGCTTTTCACCAAGCGACCATTGAT CCTTCTGCGGCATTCCTCCATACCTCTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAAAAGGCCGCGACCAGAGGATGCCATG TCGATGTCGCCTCGACAGGCTCCCGGGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGACTCCGTATCAGCACCTCCAGCAAGGA GCCTCTCCGAACGTCACCCAATCTCCGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTCTCCGTCACAGTCGGATCATCCGAGT AGGGTGAACACGCCGCAAAATAGCTCATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACATTACGGTGGCATGCCTCAGGGGTAT CAGCAGGCCATAGCTGCCCAGCAGCAACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGCGATGGCCAATCCTCAACAAATGGCC GCCATCAGGCAGATGCAACAGACCATGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCGCCCGATCAACCTGGTCCAGCTTTAT GCTACGGTCATGAAGCTCGGAGGATCGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCATTATCAGCGGAACCTAGCTGCGTAC GAGCAGGCCTTCCTCAGCACCCAGCAGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCAGGGTTTCGAAAATGCACAGCAGATG GGACACCCATCGCCAAGCCCCGCGTCTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTATTTCCCGCCAGTCACAGCCTCCAGCA ACGCCCAATGATCCTACTGGCCAAATGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCAGATTGAGGATCCCTATAAACCCATG GTCTTGCCAGAAAGCAATTTCCATGGACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCACGCTCTCACAATGAGCATCAAATCC GGGATACATGCTGAAATGCGCATGGCCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGACCAAGCAGAGTTTCTTGCGGAACAT GCCGCAGAAGTGTCTGATATGATGCTTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCGTGCCGTCGACCGACTCATCTGCATT ACAACCATACTACGCAATTTCTCGTTTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGACACATCAGAACACATTGGATTTCATG AAGGACACAGTAACATACCTCAGCAACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGAGGGTATTATGTTCAATTCATACAAC CCCTCAGTTCACAAGTACACACCGGCAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGAGTTGCTGACTCGTGCCTTTGGTCTT GCCATTTGCCCGGTCCCTGATCAGCCGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGCCAAGTCATGGCTGGAGTCGATCGAC GGGTTTGCCATCCATCTCCTGCGACTCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTACAGCTCCATAATCAATCGGGGTTTG GCGATTCTGCGTCGATTGGCCGAGAAGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGACCCTGGTGTTGTACGGCAATTGATA ACTTATGCACGACTAGCGGAATGA |
Gene | >Ani_SJS100_1|g11170.t1 ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGGTGCTTTTCACCAAGCGACCATTGAT CCTTCTGCGGCATTCCTCCATACCTCTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAAAAGGCCGCGACCAGAGGATGCCATG TCGATGTCGCCTCGACAGGCTCCCGGGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGACTCCGTATCAGCACCTCCAGCAAGGA GCCTCTCCGAACGTCACCCAATCTCCGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTCTCCGTCACAGTCGGATCATCCGAGT AGGGTGAACACGCCGCAAAATAGCTCATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACATTACGGTGGCATGCCTCAGGGGTAT CAGCAGGCCATAGCTGCCCAGCAGCAACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGCGATGGCCAATCCTCAACAAATGGCC GCCATCAGGCAGATGCAACAGACCATGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCGCCCGATCAACCTGGTCCAGCTTTAT GCTACGGTCATGAAGCTCGGAGGATCGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCATTATCAGCGGAACCTAGCTGCGTAC GAGCAGGCCTTCCTCAGCACCCAGCAGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCAGGGTTTCGAAAATGCACAGCAGATG GGACACCCATCGCCAAGCCCCGCGTCTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTATTTCCCGCCAGTCACAGCCTCCAGCA ACGCCCAATGATCCTACTGGCCAAATGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCAGATTGAGGATCCCTATAAACCCATG GTCTTGCCAGAAAGCAATTTCCATGGACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCACGCTCTCACAATGAGCATCAAATCC GGGATACATGCTGAAATGCGCATGGCCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGACCAAGCAGAGTTTCTTGCGGAACAT GCCGCAGAAGTGTCTGATATGATGCTTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCGTGCCGTCGACCGACTCATCTGCATT ACAACCATACTACGCAATTTCTCGTTTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGACACATCAGAACACATTGGATTTCATG AAGGACACAGTAACATACCTCAGCAACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGAGGGTATTATGTTCAATTCATACAAC CCCTCAGTTCACAAGTACACACCGGCAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGAGTTGCTGACTCGTGCCTTTGGTCTT GCCATTTGCCCGGTCCCTGATCAGCCGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGCCAAGTCATGGCTGGAGTCGATCGAC GGGTTTGCCATCCATCTCCTGCGACTCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTACAGCTCCATAATCAATCGGGGTTTG GCGATTCTGCGTCGATTGGCCGAGAAGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGACCCTGGTGTTGTACGGCAATTGATA ACTTATGCACGACTAGCGGAATGA |