Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1117.t1
Gene name
Locationscaffold_004:35866..36916
Strand-
Gene length (bp)1050
Transcript length (bp)1050
Coding sequence length (bp)1050
Protein length (aa) 350

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00107 ADH_zinc_N Zinc-binding dehydrogenase 3.5E-08 164 274
PF08240 ADH_N Alcohol dehydrogenase GroES-like domain 6.9E-07 32 88

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1117.t1
MILPDSQYALVVQGPGSLQLLSHAPVPSLGADQVLIEVKGVALNPSDWKMLDTAAANPGTISGGDFAGVVVACGR
EVTEAAIGDRLCGFVFGAASSGAFAQFVMVHPSLCFRIPPSMSFEAAASLGLGLMTGGLMLQSLHLNPLRAAEST
PDHWVLVYGGSTATGTLAIQLLRYHGYRVITTCSPRNFELVRRVGAVATFDYTSPTCKEDIRAYTGGTLMHVMDC
IADSRATTICYGAIGEAGGRYCALNQFPAQLHRRRVSVSPEWIHSATIFGGDVQLAGSYYRTARPEDREFAIEWA
RYCTELLAQGKLQPHPLQVQQGGLARVVEDLVLLRNQQITGKKLVYPLY*
Coding >Ani_SJS100_1|g1117.t1
ATGATTCTTCCGGATTCGCAGTATGCGTTGGTCGTGCAGGGGCCCGGTTCATTGCAATTGCTCAGCCACGCCCCT
GTTCCCTCGCTTGGAGCAGATCAGGTCCTGATCGAGGTGAAGGGGGTGGCACTAAACCCCTCAGACTGGAAGATG
CTTGATACTGCAGCAGCAAACCCGGGCACCATCAGTGGAGGGGACTTTGCTGGGGTTGTCGTTGCGTGTGGGAGG
GAGGTGACCGAGGCGGCGATTGGGGATCGTCTGTGTGGATTCGTTTTTGGAGCAGCTTCATCCGGCGCATTTGCC
CAGTTCGTCATGGTCCATCCCAGTCTCTGTTTTCGAATCCCACCCTCCATGTCGTTTGAGGCCGCCGCCTCCCTT
GGACTAGGGCTAATGACGGGGGGATTGATGCTGCAGTCTCTCCACCTCAATCCGCTACGAGCTGCAGAGTCCACG
CCTGATCATTGGGTGTTGGTCTATGGCGGCTCAACGGCAACAGGAACCCTCGCCATCCAGCTCCTACGCTATCAT
GGCTATCGCGTCATCACCACTTGTTCTCCTCGGAATTTTGAACTAGTGCGACGGGTGGGGGCAGTAGCTACGTTT
GACTATACCTCCCCCACCTGCAAGGAGGACATTCGGGCTTACACCGGTGGCACTCTCATGCATGTGATGGATTGT
ATTGCGGATTCACGCGCTACTACAATTTGTTACGGGGCCATCGGCGAAGCAGGCGGGCGGTACTGTGCCTTGAAT
CAATTTCCCGCGCAATTGCACCGCCGTCGTGTCTCTGTCTCTCCGGAGTGGATCCATAGTGCGACCATCTTCGGA
GGCGATGTTCAGCTGGCAGGCTCCTACTACCGGACAGCACGACCGGAGGATCGTGAATTTGCCATAGAATGGGCG
CGATATTGTACCGAGCTTCTAGCCCAGGGAAAACTACAACCGCATCCACTTCAGGTGCAGCAGGGAGGTCTTGCG
CGTGTGGTCGAGGACTTGGTCCTTCTACGCAATCAGCAAATCACGGGCAAGAAGCTGGTATATCCACTGTACTGA
Transcript >Ani_SJS100_1|g1117.t1
ATGATTCTTCCGGATTCGCAGTATGCGTTGGTCGTGCAGGGGCCCGGTTCATTGCAATTGCTCAGCCACGCCCCT
GTTCCCTCGCTTGGAGCAGATCAGGTCCTGATCGAGGTGAAGGGGGTGGCACTAAACCCCTCAGACTGGAAGATG
CTTGATACTGCAGCAGCAAACCCGGGCACCATCAGTGGAGGGGACTTTGCTGGGGTTGTCGTTGCGTGTGGGAGG
GAGGTGACCGAGGCGGCGATTGGGGATCGTCTGTGTGGATTCGTTTTTGGAGCAGCTTCATCCGGCGCATTTGCC
CAGTTCGTCATGGTCCATCCCAGTCTCTGTTTTCGAATCCCACCCTCCATGTCGTTTGAGGCCGCCGCCTCCCTT
GGACTAGGGCTAATGACGGGGGGATTGATGCTGCAGTCTCTCCACCTCAATCCGCTACGAGCTGCAGAGTCCACG
CCTGATCATTGGGTGTTGGTCTATGGCGGCTCAACGGCAACAGGAACCCTCGCCATCCAGCTCCTACGCTATCAT
GGCTATCGCGTCATCACCACTTGTTCTCCTCGGAATTTTGAACTAGTGCGACGGGTGGGGGCAGTAGCTACGTTT
GACTATACCTCCCCCACCTGCAAGGAGGACATTCGGGCTTACACCGGTGGCACTCTCATGCATGTGATGGATTGT
ATTGCGGATTCACGCGCTACTACAATTTGTTACGGGGCCATCGGCGAAGCAGGCGGGCGGTACTGTGCCTTGAAT
CAATTTCCCGCGCAATTGCACCGCCGTCGTGTCTCTGTCTCTCCGGAGTGGATCCATAGTGCGACCATCTTCGGA
GGCGATGTTCAGCTGGCAGGCTCCTACTACCGGACAGCACGACCGGAGGATCGTGAATTTGCCATAGAATGGGCG
CGATATTGTACCGAGCTTCTAGCCCAGGGAAAACTACAACCGCATCCACTTCAGGTGCAGCAGGGAGGTCTTGCG
CGTGTGGTCGAGGACTTGGTCCTTCTACGCAATCAGCAAATCACGGGCAAGAAGCTGGTATATCCACTGTACTGA
Gene >Ani_SJS100_1|g1117.t1
ATGATTCTTCCGGATTCGCAGTATGCGTTGGTCGTGCAGGGGCCCGGTTCATTGCAATTGCTCAGCCACGCCCCT
GTTCCCTCGCTTGGAGCAGATCAGGTCCTGATCGAGGTGAAGGGGGTGGCACTAAACCCCTCAGACTGGAAGATG
CTTGATACTGCAGCAGCAAACCCGGGCACCATCAGTGGAGGGGACTTTGCTGGGGTTGTCGTTGCGTGTGGGAGG
GAGGTGACCGAGGCGGCGATTGGGGATCGTCTGTGTGGATTCGTTTTTGGAGCAGCTTCATCCGGCGCATTTGCC
CAGTTCGTCATGGTCCATCCCAGTCTCTGTTTTCGAATCCCACCCTCCATGTCGTTTGAGGCCGCCGCCTCCCTT
GGACTAGGGCTAATGACGGGGGGATTGATGCTGCAGTCTCTCCACCTCAATCCGCTACGAGCTGCAGAGTCCACG
CCTGATCATTGGGTGTTGGTCTATGGCGGCTCAACGGCAACAGGAACCCTCGCCATCCAGCTCCTACGCTATCAT
GGCTATCGCGTCATCACCACTTGTTCTCCTCGGAATTTTGAACTAGTGCGACGGGTGGGGGCAGTAGCTACGTTT
GACTATACCTCCCCCACCTGCAAGGAGGACATTCGGGCTTACACCGGTGGCACTCTCATGCATGTGATGGATTGT
ATTGCGGATTCACGCGCTACTACAATTTGTTACGGGGCCATCGGCGAAGCAGGCGGGCGGTACTGTGCCTTGAAT
CAATTTCCCGCGCAATTGCACCGCCGTCGTGTCTCTGTCTCTCCGGAGTGGATCCATAGTGCGACCATCTTCGGA
GGCGATGTTCAGCTGGCAGGCTCCTACTACCGGACAGCACGACCGGAGGATCGTGAATTTGCCATAGAATGGGCG
CGATATTGTACCGAGCTTCTAGCCCAGGGAAAACTACAACCGCATCCACTTCAGGTGCAGCAGGGAGGTCTTGCG
CGTGTGGTCGAGGACTTGGTCCTTCTACGCAATCAGCAAATCACGGGCAAGAAGCTGGTATATCCACTGTACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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