© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11140.t1 |
| Gene name | |
| Location | scaffold_159:20839..22179 |
| Strand | + |
| Gene length (bp) | 1340 |
| Transcript length (bp) | 1236 |
| Coding sequence length (bp) | 1236 |
| Protein length (aa) | 412 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01529 | DHHC | DHHC palmitoyltransferase | 1.8E-32 | 154 | 297 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016409 | palmitoyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | No |
| GO:0016746 | acyltransferase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 79 | 101 | 22 |
| 3 | 106 | 128 | 22 |
| 4 | 199 | 221 | 22 |
| 5 | 242 | 261 | 19 |
| 6 | 265 | 287 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11140.t1 MGAIRTIALVILGISGFVFVALFGRLPAFRKTPIGWLYRALWIHIPNGLVYLDSWLLNGWLSHCWTCSGSYILHE NHPLILIFFSSLMIAGQCMFIPTAWPRISTVHHIWIPILATMPYVLLYASVTTKSFITTKNHAVEMERYPYDKVI FHPGQRCRTCHIVKPARSKHCSICKACVARHDHHCVWLMNCVGLHNYHYFLSMILSLCLMLLYGSYLGYTLLYQT YNRLIPSDSPLRTTRQTWTGFCNIWAVVIAADIRIGAITLLMTMTAPLAAAFLVYHTYLIWAGMTTNESSKWSDW KEEVADGMAYKSSKAEIYSSSPLLAEYQSAQSFWPVSSDQVLILTDGEPPKEGCLLSQHSNEITQPSNKDAPIDR RWIQVQSMKEIDNIYDLGFWDNLRHVLGLPIRPKVI* |
| Coding | >Ani_SJS100_1|g11140.t1 ATGGGCGCTATAAGAACCATTGCACTTGTGATCCTCGGGATCTCTGGATTTGTTTTCGTGGCGCTATTTGGGAGA CTCCCTGCGTTTCGCAAAACTCCCATTGGTTGGCTGTATAGAGCTCTTTGGATACACATACCTAACGGCCTTGTT TACCTTGACAGCTGGCTACTAAATGGCTGGCTGTCTCACTGCTGGACTTGTTCTGGCAGTTACATTCTGCACGAA AATCACCCGTTGATTCTTATATTCTTCTCTTCCCTTATGATTGCAGGGCAGTGTATGTTCATCCCAACTGCTTGG CCTAGGATTTCCACAGTCCACCATATCTGGATCCCGATCCTTGCCACAATGCCCTACGTTTTGCTGTATGCAAGC GTTACCACCAAGTCATTCATCACCACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGTCATC TTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGGCACGAAGTAAACATTGCAGCATCTGCAAA GCATGTGTCGCACGGCATGACCATCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTACTTT CTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCATACCTGGGATACACTCTCTTGTATCAAACA TACAACAGGCTGATACCATCGGACTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATATATGG GCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGCTGATGACCATGACAGCACCACTGGCGGCC GCCTTTCTCGTGTACCACACCTACTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGACTGG AAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTGAAATCTATAGCAGCTCACCCTTGTTGGCC GAGTATCAGAGTGCTCAGTCATTCTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCCGCCC AAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGCCGAGCAACAAGGACGCTCCGATAGACCGG AGGTGGATTCAGGTGCAAAGTATGAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCTGCGTCAT GTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAA |
| Transcript | >Ani_SJS100_1|g11140.t1 ATGGGCGCTATAAGAACCATTGCACTTGTGATCCTCGGGATCTCTGGATTTGTTTTCGTGGCGCTATTTGGGAGA CTCCCTGCGTTTCGCAAAACTCCCATTGGTTGGCTGTATAGAGCTCTTTGGATACACATACCTAACGGCCTTGTT TACCTTGACAGCTGGCTACTAAATGGCTGGCTGTCTCACTGCTGGACTTGTTCTGGCAGTTACATTCTGCACGAA AATCACCCGTTGATTCTTATATTCTTCTCTTCCCTTATGATTGCAGGGCAGTGTATGTTCATCCCAACTGCTTGG CCTAGGATTTCCACAGTCCACCATATCTGGATCCCGATCCTTGCCACAATGCCCTACGTTTTGCTGTATGCAAGC GTTACCACCAAGTCATTCATCACCACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGTCATC TTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGGCACGAAGTAAACATTGCAGCATCTGCAAA GCATGTGTCGCACGGCATGACCATCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTACTTT CTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCATACCTGGGATACACTCTCTTGTATCAAACA TACAACAGGCTGATACCATCGGACTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATATATGG GCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGCTGATGACCATGACAGCACCACTGGCGGCC GCCTTTCTCGTGTACCACACCTACTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGACTGG AAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTGAAATCTATAGCAGCTCACCCTTGTTGGCC GAGTATCAGAGTGCTCAGTCATTCTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCCGCCC AAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGCCGAGCAACAAGGACGCTCCGATAGACCGG AGGTGGATTCAGGTGCAAAGTATGAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCTGCGTCAT GTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAA |
| Gene | >Ani_SJS100_1|g11140.t1 ATGGGCGCTATAAGAACCATTGCACTTGTGATCCTCGGGATCTCTGGATTTGTTTTCGTGGCGCTATTTGGGAGA CTCCCTGCGTTTCGGTAGGCTGCAGCATTTCGTTGTAAGGGCCGTGACTGATAGATGATTCCTGTAGCAAAACTC CCATTGGTTGGCTGTATAGAGCTCTTTGGATACACATACCTAACGGCCTTGTTTACCTTGACAGCTGGCTACTAA ATGGCTGGCTGTCTCACTGCTGGACTTGTTCTGGCAGTTACATTCTGCACGAAAATCACCCGTTGATTCTTGTTA GTTCATGTGCCTAATATTCAACGGTCTCCTCTAATTATAGATGTTAGATATTCTTCTCTTCCCTTATGATTGCAG GGCAGTGTATGTTCATCCCAACTGCTTGGCCTAGGATTTCCACAGTCCACCATATCTGGATCCCGATCCTTGCCA CAATGCCCTACGTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTCATCACCACAAAAAATCATGCAGTGGAAA TGGAACGCTATCCATACGATAAGGTCATCTTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGG CACGAAGTAAACATTGCAGCATCTGCAAAGCATGTGTCGCACGGCATGACCATCACTGCGTTTGGCTCATGAACT GTGTCGGACTTCACAACTACCACTACTTTCTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCAT ACCTGGGATACACTCTCTTGTATCAAACATACAACAGGCTGATACCATCGGACTCACCCTTGCGGACGACCCGGC AAACCTGGACTGGCTTTTGCAATATATGGGCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGC TGATGACCATGACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCACACCTACTTGATTTGGGCTGGTATGACGA CCAACGAAAGCTCAAAGTGGTCAGACTGGAAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTG AAATCTATAGCAGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAGTCATTCTGGCCAGTGAGTAGTGATCAGG TACTCATTCTGACAGATGGTGAGCCGCCCAAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGC CGAGCAACAAGGACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAAAGTATGAAGGAGATTGACAACATCTATG ACCTGGGATTTTGGGACAATCTGCGTCATGTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAA |