Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1114.t1
Gene name
Locationscaffold_004:20992..21629
Strand+
Gene length (bp)637
Transcript length (bp)459
Coding sequence length (bp)459
Protein length (aa) 153

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 110 132 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1114.t1
MQGLIGSQSIPTLHTGNLTLNPLRLSEEEEDSIDSENTTVHKYHYNHRYSNNSSSSSSSPTNHPPDIEKCQPYRG
YRQHDDDDDDDDTEILSNASGDDSINSNGRPKSRVVMLYAACYVAFAILSFFSAAYYFLCWMPYEPSNSNPFPGR
HR*
Coding >Ani_SJS100_1|g1114.t1
ATGCAGGGATTGATTGGTAGCCAATCCATCCCGACCCTGCATACGGGGAATCTGACACTTAATCCACTGCGACTC
AGCGAAGAAGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCACAAGTACCACTACAACCACCGCTACAGC
AACAATAGCAGCAGCAGCAGCAGCAGTCCAACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGGGGG
TATAGGCAACACGACGATGATGACGATGACGATGACACGGAGATTCTGAGCAATGCTAGTGGTGATGATAGCATT
AATAGTAATGGACGACCAAAGTCAAGGGTGGTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTGTCA
TTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTATGAACCGTCTAACAGTAATCCGTTTCCGGGCCGT
CATCGGTGA
Transcript >Ani_SJS100_1|g1114.t1
ATGCAGGGATTGATTGGTAGCCAATCCATCCCGACCCTGCATACGGGGAATCTGACACTTAATCCACTGCGACTC
AGCGAAGAAGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCACAAGTACCACTACAACCACCGCTACAGC
AACAATAGCAGCAGCAGCAGCAGCAGTCCAACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGGGGG
TATAGGCAACACGACGATGATGACGATGACGATGACACGGAGATTCTGAGCAATGCTAGTGGTGATGATAGCATT
AATAGTAATGGACGACCAAAGTCAAGGGTGGTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTGTCA
TTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTATGAACCGTCTAACAGTAATCCGTTTCCGGGCCGT
CATCGGTGA
Gene >Ani_SJS100_1|g1114.t1
ATGCAGGGATTGATTGGTAGCCAATCCATCCCGACCCTGCATACGGGGAATGTACCCAATAGCATTACTACTACT
ACTACTACATCCCTATACCACCTACCTACGTATAATTAATTGTACTACCATCAGCTGACACTTAATCCACTGCGA
CTCAGCGAAGAAGAAGAAGATTCCATTGATTCGGAAAATACTACGGTGCACAAGTACCACTACAACCACCGCTAC
AGCAACAATAGCAGCAGCAGCAGCAGCAGTCCAACTAATCACCCTCCCGATATTGAGAAATGTCAGCCCTACCGG
GGGTATAGGCAACACGACGATGATGACGATGACGATGACACGGAGATTCTGAGCAATGCTAGTGGTGATGATAGC
ATTAATAGTAATGGACGACCAAAGTCAAGGGTGGTGATGCTCTACGCGGCATGTTATGTCGCATTCGCCATCCTG
TCATTCTTCTCCGCCGCTTATTACTTTTTGTGCTGGATGCCGTGTATGTGTATCACACATCATTCCCATGATTGG
GGATTTTTTGTTTGGTTTCTTCACACTCTTAACTCTACGGTTACTAATCATGTCGGGTTTGTGTGCAGATGAACC
GTCTAACAGTAATCCGTTTCCGGGCCGTCATCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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