Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11139.t1
Gene name
Locationscaffold_159:18751..20282
Strand-
Gene length (bp)1531
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08914 Myb_DNA-bind_2 Rap1 Myb domain 1.2E-21 91 153
PF11626 Rap1_C TRF2-interacting telomeric protein/Rap1 - C terminal domain 5.3E-19 328 401

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11139.t1
MTGTSTTGDSGVLKEAVTPLFQGKQFWLSHNIPQRKWFKELIENLPSDTYSFKYVEDSHRLGKLQNLENYRAGPS
EARPVGATNIPTRGHKIPYTLEDDQLLWDWMQPHERNPKASIRGNKIYQELAEKHPRHTYQSYRDRYLKRLKGHP
RPGGMPESTDQPAPDGPSNLATRLVQSEPRGGSAQGVEPTAMQANDKKRKRASEDTPGEGNVDSTNKPSLKKRVT
EVNIDLPDPFISGPQTKLAAVPHSATASNGQRPTPGAKEARERGATEGSKAPAKEPRQPSQPDPLFLELPFLPSD
DEPEEEDMEQDIDAWIDERLLNGKAQHEEQIHLALRCTSMDPDLADRVLAILVEGKPIPDDMPGVWTPEDDKCIE
GNETRGIQRVMEKHGTEAFNNRWEYLSMVREAGLLDTL*
Coding >Ani_SJS100_1|g11139.t1
ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG
TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGAACTTACCCTCTGACACGTAC
TCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCCTTCT
GAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAG
TTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCAAGAG
CTAGCCGAGAAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCA
CGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTC
CAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAA
CGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACC
GAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCG
ACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAA
GCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGAC
GATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCT
CAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCT
ATCCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAA
GGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTAC
CTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGA
Transcript >Ani_SJS100_1|g11139.t1
ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG
TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGAACTTACCCTCTGACACGTAC
TCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCCTTCT
GAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAG
TTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCAAGAG
CTAGCCGAGAAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCA
CGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTC
CAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAA
CGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACC
GAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCG
ACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAA
GCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGAC
GATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCT
CAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCT
ATCCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAA
GGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTAC
CTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGA
Gene >Ani_SJS100_1|g11139.t1
ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG
TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGGTACTACAACTATACATGGCT
TTTAAGAACGCGTGACTAATTTATCTATGGAAAAACGGCGGTACTATACGGCTGCTGGAGAAGGATGCAGATATC
AGATTGGTTGATCATAAGAGAAAGAACTTACCCTCTGACACGTGAGGTTTCCTGCCATTTCCATCCTTGACTCAC
TTGTGTAATCGCATCGCTGGAAAACAGCGCACACTGTTTTAGCCTTCTACCATCCAGTGGACACTTACAGGATAT
AGGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGG
CCTTCTGAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGAT
GACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTAT
CAAGAGCTAGCCGAGAAGGTATCGAGAACCCCCTCTGAGCTGTGAAATGCAGGCATACTAAGCGTCATCCCACTA
GCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCACGTCCTGGTGG
TATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCC
TCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAACGGGCTTCGGA
GGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAATAT
CGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCGACAGCATCCAA
CGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAA
GGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGATGAGCCTGA
AGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAAGA
ACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCTATCCTAGTAGA
AGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAGAC
TCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTACCTCAGCATGGT
CAGAGAGGCCGGTCTTTTAGATACCCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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