Protein ID | Ani_SJS100_1|g11139.t1 |
Gene name | |
Location | scaffold_159:18751..20282 |
Strand | - |
Gene length (bp) | 1531 |
Transcript length (bp) | 1242 |
Coding sequence length (bp) | 1242 |
Protein length (aa) | 414 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08914 | Myb_DNA-bind_2 | Rap1 Myb domain | 1.2E-21 | 91 | 153 |
PF11626 | Rap1_C | TRF2-interacting telomeric protein/Rap1 - C terminal domain | 5.3E-19 | 328 | 401 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g11139.t1 MTGTSTTGDSGVLKEAVTPLFQGKQFWLSHNIPQRKWFKELIENLPSDTYSFKYVEDSHRLGKLQNLENYRAGPS EARPVGATNIPTRGHKIPYTLEDDQLLWDWMQPHERNPKASIRGNKIYQELAEKHPRHTYQSYRDRYLKRLKGHP RPGGMPESTDQPAPDGPSNLATRLVQSEPRGGSAQGVEPTAMQANDKKRKRASEDTPGEGNVDSTNKPSLKKRVT EVNIDLPDPFISGPQTKLAAVPHSATASNGQRPTPGAKEARERGATEGSKAPAKEPRQPSQPDPLFLELPFLPSD DEPEEEDMEQDIDAWIDERLLNGKAQHEEQIHLALRCTSMDPDLADRVLAILVEGKPIPDDMPGVWTPEDDKCIE GNETRGIQRVMEKHGTEAFNNRWEYLSMVREAGLLDTL* |
Coding | >Ani_SJS100_1|g11139.t1 ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGAACTTACCCTCTGACACGTAC TCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCCTTCT GAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAG TTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCAAGAG CTAGCCGAGAAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCA CGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTC CAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAA CGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACC GAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCG ACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAA GCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGAC GATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCT CAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCT ATCCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAA GGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTAC CTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGA |
Transcript | >Ani_SJS100_1|g11139.t1 ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGAACTTACCCTCTGACACGTAC TCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCCTTCT GAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAG TTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCAAGAG CTAGCCGAGAAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCA CGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTC CAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAA CGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACC GAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCG ACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAA GCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGAC GATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCT CAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCT ATCCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAA GGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTAC CTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGA |
Gene | >Ani_SJS100_1|g11139.t1 ATGACTGGAACGAGCACTACAGGAGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGCAG TTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTAATCGAGGTACTACAACTATACATGGCT TTTAAGAACGCGTGACTAATTTATCTATGGAAAAACGGCGGTACTATACGGCTGCTGGAGAAGGATGCAGATATC AGATTGGTTGATCATAAGAGAAAGAACTTACCCTCTGACACGTGAGGTTTCCTGCCATTTCCATCCTTGACTCAC TTGTGTAATCGCATCGCTGGAAAACAGCGCACACTGTTTTAGCCTTCTACCATCCAGTGGACACTTACAGGATAT AGGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGG CCTTCTGAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGAT GACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTAT CAAGAGCTAGCCGAGAAGGTATCGAGAACCCCCTCTGAGCTGTGAAATGCAGGCATACTAAGCGTCATCCCACTA GCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCACGTCCTGGTGG TATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCC TCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAACGGGCTTCGGA GGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAATAT CGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCGACAGCATCCAA CGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAA GGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGATGAGCCTGA AGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAAGA ACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCTATCCTAGTAGA AGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAGAC TCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTACCTCAGCATGGT CAGAGAGGCCGGTCTTTTAGATACCCTTTGA |